Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:28:51 (1672447): wrapper (7.7.26015): starting
21:28:51 (1672447): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 21:28:51] Arguments: --nthreads 9
[2025-11-26 21:28:51] Threads: 9
[2025-11-26 21:28:51] Checking for CVMFS
[2025-11-26 21:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:28:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:28:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:28:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:28:52] 2.13.2.0 11163 38145 278828 153343 1 89 39163272 40960001 9488 16776704 0 36476635 99.631 32159829 37193 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:28:52] CVMFS is ok
[2025-11-26 21:28:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:28:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:28:52] Further information can be found at the LHC@home message board.
[2025-11-26 21:28:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:28:52] Checking for apptainer binary...
[2025-11-26 21:28:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:28:52] Running /usr/bin/apptainer --version
[2025-11-26 21:28:52] apptainer version 1.4.4-1.el9
[2025-11-26 21:28:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:28:52] c-210-35-1.aglt2.org
[2025-11-26 21:28:52] apptainer works
[2025-11-26 21:28:52] Set ATHENA_PROC_NUMBER=9
[2025-11-26 21:28:52] Set ATHENA_CORE_NUMBER=9
[2025-11-26 21:28:52] Starting ATLAS job with PandaID=6891106657
[2025-11-26 21:28:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 05:22:10]  *** The last 200 lines of the pilot log: ***
[2025-11-28 05:22:10] 2025-11-28 10:21:36,211 | INFO     | fitting pss+swap vs Time
[2025-11-28 05:22:10] 2025-11-28 10:21:36,218 | INFO     | sum of square deviations: 2060564035568.3079
[2025-11-28 05:22:10] 2025-11-28 10:21:36,279 | INFO     | sum of deviations: 6764099292051.934
[2025-11-28 05:22:10] 2025-11-28 10:21:36,279 | INFO     | mean x: 1764267908.4281914
[2025-11-28 05:22:10] 2025-11-28 10:21:36,279 | INFO     | mean y: 3130855.699468085
[2025-11-28 05:22:10] 2025-11-28 10:21:36,279 | INFO     | intersect: -5788333570.737413
[2025-11-28 05:22:10] 2025-11-28 10:21:36,281 | INFO     | chi2: 6.851726387200399
[2025-11-28 05:22:10] 2025-11-28 10:21:36,283 | INFO     | sum of square deviations: 2044173920022.06
[2025-11-28 05:22:10] 2025-11-28 10:21:36,341 | INFO     | sum of deviations: 7426224613176.552
[2025-11-28 05:22:10] 2025-11-28 10:21:36,341 | INFO     | mean x: 1764267755.9541333
[2025-11-28 05:22:10] 2025-11-28 10:21:36,341 | INFO     | mean y: 3137015.6458666665
[2025-11-28 05:22:10] 2025-11-28 10:21:36,341 | INFO     | intersect: -6406224000.641317
[2025-11-28 05:22:10] 2025-11-28 10:21:36,343 | INFO     | chi2: 3.966937539306919
[2025-11-28 05:22:10] 2025-11-28 10:21:36,343 | INFO     | current chi2=3.966937539306919 (change=42.10309467818955 %)
[2025-11-28 05:22:10] 2025-11-28 10:21:36,345 | INFO     | sum of square deviations: 2027868729537.7644
[2025-11-28 05:22:10] 2025-11-28 10:21:36,461 | INFO     | sum of deviations: 7759806641235.717
[2025-11-28 05:22:10] 2025-11-28 10:21:36,466 | INFO     | mean x: 1764267603.4695187
[2025-11-28 05:22:10] 2025-11-28 10:21:36,466 | INFO     | mean y: 3140132.5037433156
[2025-11-28 05:22:10] 2025-11-28 10:21:36,466 | INFO     | intersect: -6747975098.431544
[2025-11-28 05:22:10] 2025-11-28 10:21:36,468 | INFO     | chi2: 2.790092164894991
[2025-11-28 05:22:10] 2025-11-28 10:21:36,468 | INFO     | current chi2=2.790092164894991 (change=29.666344951262825 %)
[2025-11-28 05:22:10] 2025-11-28 10:21:36,474 | INFO     | sum of square deviations: 2011646866698.068
[2025-11-28 05:22:10] 2025-11-28 10:21:36,607 | INFO     | sum of deviations: 7735062147355.096
[2025-11-28 05:22:10] 2025-11-28 10:21:36,607 | INFO     | mean x: 1764267450.9678285
[2025-11-28 05:22:10] 2025-11-28 10:21:36,607 | INFO     | mean y: 3139899.5517426273
[2025-11-28 05:22:10] 2025-11-28 10:21:36,607 | INFO     | intersect: -6780713968.494062
[2025-11-28 05:22:10] 2025-11-28 10:21:36,617 | INFO     | chi2: 2.7790393241101095
[2025-11-28 05:22:10] 2025-11-28 10:21:36,618 | INFO     | current chi2=2.7790393241101095 (change=0.3961460816222731 %)
[2025-11-28 05:22:10] 2025-11-28 10:21:36,618 | INFO     | right removable region: 1864
[2025-11-28 05:22:10] 2025-11-28 10:21:36,625 | INFO     | sum of square deviations: 2044162877696.9634
[2025-11-28 05:22:10] 2025-11-28 10:21:36,781 | INFO     | sum of deviations: 6182789554104.805
[2025-11-28 05:22:10] 2025-11-28 10:21:36,781 | INFO     | mean x: 1764268060.9536
[2025-11-28 05:22:10] 2025-11-28 10:21:36,782 | INFO     | mean y: 3136258.193066667
[2025-11-28 05:22:10] 2025-11-28 10:21:36,785 | INFO     | intersect: -5333081445.845352
[2025-11-28 05:22:10] 2025-11-28 10:21:36,787 | INFO     | chi2: 4.46243196642899
[2025-11-28 05:22:10] 2025-11-28 10:21:36,787 | INFO     | current chi2=4.46243196642899 (change=34.87142197088915 %)
[2025-11-28 05:22:10] 2025-11-28 10:21:36,793 | INFO     | sum of square deviations: 2027851789613.3047
[2025-11-28 05:22:10] 2025-11-28 10:21:36,913 | INFO     | sum of deviations: 6039560410604.86
[2025-11-28 05:22:10] 2025-11-28 10:21:36,913 | INFO     | mean x: 1764268213.4657755
[2025-11-28 05:22:10] 2025-11-28 10:21:36,913 | INFO     | mean y: 3137597.1930481284
[2025-11-28 05:22:10] 2025-11-28 10:21:36,913 | INFO     | intersect: -5251390623.416389
[2025-11-28 05:22:10] 2025-11-28 10:21:36,920 | INFO     | chi2: 4.4041946622810535
[2025-11-28 05:22:10] 2025-11-28 10:21:36,920 | INFO     | current chi2=4.4041946622810535 (change=1.3050575243736433 %)
[2025-11-28 05:22:10] 2025-11-28 10:21:36,920 | INFO     | left removable region: 20
[2025-11-28 05:22:10] 2025-11-28 10:21:36,926 | INFO     | sum of square deviations: 1944443556673.6116
[2025-11-28 05:22:10] 2025-11-28 10:21:37,032 | INFO     | sum of deviations: 6829863695071.947
[2025-11-28 05:22:10] 2025-11-28 10:21:37,033 | INFO     | mean x: 1764268030.5428417
[2025-11-28 05:22:10] 2025-11-28 10:21:37,033 | INFO     | mean y: 3148314.4056399134
[2025-11-28 05:22:10] 2025-11-28 10:21:37,033 | INFO     | intersect: -6193848316.751018
[2025-11-28 05:22:10] 2025-11-28 10:21:37,039 | INFO     | chi2: 0.29971155437630304
[2025-11-28 05:22:10] 2025-11-28 10:21:37,039 | INFO     | current memory leak: 3.51 B/s (using 1844 data points, chi2=0.30)
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | could have reported an average CPU frequency of 2712 MHz (66 samples)
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | ..............................
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . Timing measurements:
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . get job = 0 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . initial setup = 2 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . payload setup = 9 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . stage-in = 0 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . payload execution = 114677 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,041 | INFO     | . stage-out = 5 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,042 | INFO     | . log creation = 1 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,042 | INFO     | ..............................
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | 
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | job summary report
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | --------------------------------------------------
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | PanDA job id: 6891106657
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | task id: 47483661
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | errors: (none)
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | pilot state: finished 
[2025-11-28 05:22:10] 2025-11-28 10:21:37,208 | INFO     | transexitcode: 0
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | exeerrorcode: 0
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | exeerrordiag: 
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | exitcode: 0
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | exitmsg: OK
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | cpuconsumptiontime: 248466 s
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | nevents: 1000
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | neventsw: 0
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | pid: 1682698
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | pgrp: 1682698
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | corecount: 9
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | event service: False
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | sizes: {0: 2284077, 1: 2284332, 7: 2284594, 12: 2284622, 114691: 2361642, 114697: 2370636, 114698: 2370820, 114729: 2371066}
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | --------------------------------------------------
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | 
[2025-11-28 05:22:10] 2025-11-28 10:21:37,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 05:22:10] 2025-11-28 10:21:37,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 05:22:10] 2025-11-28 10:21:37,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 05:22:10] 2025-11-28 10:21:37,333 | INFO     | job 6891106657 has completed (purged errors)
[2025-11-28 05:22:10] 2025-11-28 10:21:37,342 | INFO     | overall cleanup function is called
[2025-11-28 05:22:10] 2025-11-28 10:21:38,388 | INFO     | --- collectZombieJob: --- 10, [1682698]
[2025-11-28 05:22:10] 2025-11-28 10:21:38,388 | INFO     | zombie collector waiting for pid 1682698
[2025-11-28 05:22:10] 2025-11-28 10:21:38,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 05:22:10] 2025-11-28 10:21:38,388 | INFO     | collected zombie processes
[2025-11-28 05:22:10] 2025-11-28 10:21:38,388 | INFO     | will attempt to kill all subprocesses of pid=1682698
[2025-11-28 05:22:10] 2025-11-28 10:21:38,897 | INFO     | process IDs to be killed: [1682698] (in reverse order)
[2025-11-28 05:22:10] 2025-11-28 10:21:39,000 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 05:22:10] 2025-11-28 10:21:39,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 05:22:10] 2025-11-28 10:21:39,013 | INFO     | did not find any defunct processes belonging to 1682698
[2025-11-28 05:22:10] 2025-11-28 10:21:39,021 | INFO     | did not find any defunct processes belonging to 1682698
[2025-11-28 05:22:10] 2025-11-28 10:21:39,023 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 05:22:10] 2025-11-28 10:21:39,023 | INFO     | ready for new job
[2025-11-28 05:22:10] 2025-11-28 10:21:39,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 05:22:10] 2025-11-28 10:21:39,030 | INFO     | ***************************************
[2025-11-28 05:22:10] 2025-11-28 10:21:39,030 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 05:22:10] 2025-11-28 10:21:39,030 | INFO     | ***************************************
[2025-11-28 05:22:10] 2025-11-28 10:21:39,030 | INFO     | 
[2025-11-28 05:22:10] 2025-11-28 10:21:39,033 | INFO     | architecture information:
[2025-11-28 05:22:10] 2025-11-28 10:21:39,034 | INFO     | executing command: cat /etc/os-release
[2025-11-28 05:22:10] 2025-11-28 10:21:39,076 | INFO     | cat /etc/os-release:
[2025-11-28 05:22:10] NAME="CentOS Linux"
[2025-11-28 05:22:10] VERSION="7 (Core)"
[2025-11-28 05:22:10] ID="centos"
[2025-11-28 05:22:10] ID_LIKE="rhel fedora"
[2025-11-28 05:22:10] VERSION_ID="7"
[2025-11-28 05:22:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 05:22:10] ANSI_COLOR="0;31"
[2025-11-28 05:22:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 05:22:10] HOME_URL="https://www.centos.org/"
[2025-11-28 05:22:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 05:22:10] 
[2025-11-28 05:22:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 05:22:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 05:22:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 05:22:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 05:22:10] 
[2025-11-28 05:22:10] 2025-11-28 10:21:39,076 | INFO     | ***************************************
[2025-11-28 05:22:10] 2025-11-28 10:21:39,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 05:22:10] 2025-11-28 10:21:39,620 | INFO     | sufficient remaining disk space (70138200064 B)
[2025-11-28 05:22:10] 2025-11-28 10:21:39,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 05:22:10] 2025-11-28 10:21:39,621 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 05:22:10] 2025-11-28 10:21:39,621 | INFO     | update_server=False
[2025-11-28 05:22:10] 2025-11-28 10:21:39,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 05:22:10] 2025-11-28 10:21:39,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 05:22:10] 2025-11-28 10:21:39,702 | INFO     | all job control threads have been joined
[2025-11-28 05:22:10] 2025-11-28 10:21:39,752 | INFO     | all payload control threads have been joined
[2025-11-28 05:22:10] 2025-11-28 10:21:39,819 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 05:22:10] 2025-11-28 10:21:39,819 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 05:22:10] 2025-11-28 10:21:39,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:22:10] 2025-11-28 10:21:39,819 | INFO     | will abort loop
[2025-11-28 05:22:10] 2025-11-28 10:21:40,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 05:22:10] 2025-11-28 10:21:40,547 | INFO     | all data control threads have been joined
[2025-11-28 05:22:10] 2025-11-28 10:21:40,627 | INFO     | [job] retrieve thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:40,696 | INFO     | [payload] failed_post thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:40,708 | INFO     | [job] control thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:40,712 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:40,760 | INFO     | [payload] control thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:40,826 | INFO     | [job] job monitor thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:41,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:41,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:41,553 | INFO     | [data] control thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:41,615 | INFO     | [data] copytool_in thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:41,615 | INFO     | [job] validate thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:41,918 | INFO     | [payload] validate_post thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:42,022 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:42,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:22:10] 2025-11-28 10:21:42,371 | INFO     | [data] copytool_out thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:43,230 | INFO     | [job] queue monitor thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:43,630 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 05:22:10] 2025-11-28 10:21:44,955 | INFO     | [monitor] cgroup control has ended
[2025-11-28 05:22:10] 2025-11-28 10:21:46,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881194092352)>', '<ExcThread(monitor, started 139880709486336)>']
[2025-11-28 05:22:10] 2025-11-28 10:21:51,332 | INFO     | all workflow threads have been joined
[2025-11-28 05:22:10] 2025-11-28 10:21:51,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 05:22:10] 2025-11-28 10:21:51,333 | INFO     | traces error code: 0
[2025-11-28 05:22:10] 2025-11-28 10:21:51,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 05:22:10] 2025-11-28 10:22:09,072 | INFO     | PID=1676324 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 05:22:10] 2025-11-28 10:22:09,073 | INFO     | .. there are 11 such processes running
[2025-11-28 05:22:10] 2025-11-28 10:22:09,074 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 05:22:10] 2025-11-28 10:22:09,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 05:22:10] 2025-11-28 10:22:09,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 05:22:10] 2025-11-28 10:22:09,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 05:22:10] 2025-11-28 10:22:09,074 | INFO     | [monitor] control thread has ended
[2025-11-28 05:22:10] 2025-11-28 10:22:09,336 [wrapper] ==== pilot stdout END ====
[2025-11-28 05:22:10] 2025-11-28 10:22:09,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 05:22:10] 2025-11-28 10:22:09,366 [wrapper] pilotpid: 1676324
[2025-11-28 05:22:10] 2025-11-28 10:22:09,385 [wrapper] Pilot exit status: 0
[2025-11-28 05:22:10] 2025-11-28 10:22:09,486 [wrapper] pandaids: 6891106657
[2025-11-28 05:22:10] 2025-11-28 10:22:09,654 [wrapper] cleanup supervisor_pilot  502843 1676325
[2025-11-28 05:22:10] 2025-11-28 10:22:09,667 [wrapper] Test setup, not cleaning
[2025-11-28 05:22:10] 2025-11-28 10:22:09,682 [wrapper] apfmon messages muted
[2025-11-28 05:22:10] 2025-11-28 10:22:09,697 [wrapper] ==== wrapper stdout END ====
[2025-11-28 05:22:10] 2025-11-28 10:22:09,712 [wrapper] ==== wrapper stderr END ====
[2025-11-28 05:22:10]  *** Error codes and diagnostics ***
[2025-11-28 05:22:10]     "exeErrorCode": 0,
[2025-11-28 05:22:10]     "exeErrorDiag": "",
[2025-11-28 05:22:10]     "pilotErrorCode": 0,
[2025-11-28 05:22:10]     "pilotErrorDiag": "",
[2025-11-28 05:22:10]  *** Listing of results directory ***
[2025-11-28 05:22:10] total 1341864
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-28 05:22:10] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas       100 Nov 26 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 05:22:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 21:28 run_atlas
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas       105 Nov 26 21:28 job.xml
[2025-11-28 05:22:10] -rw-r--r--. 2 boincer umatlas 410365095 Nov 26 21:28 EVNT.47483658._000273.pool.root.1
[2025-11-28 05:22:10] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 21:28 input.tar.gz
[2025-11-28 05:22:10] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 21:28 start_atlas.sh
[2025-11-28 05:22:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 21:28 shared
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas         0 Nov 26 21:28 boinc_lockfile
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 21:28 pandaJob.out
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas    991554 Nov 26 21:29 agis_schedconf.cvmfs.json
[2025-11-28 05:22:10] drwx------. 5 boincer umatlas      4096 Nov 26 21:29 pilot3
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas       533 Nov 28 05:08 boinc_task_state.xml
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas 925678492 Nov 28 05:20 HITS.47483661._002423.pool.root.1
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas      1059 Nov 28 05:20 memory_monitor_summary.json
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas   1516240 Nov 28 05:21 agis_ddmendpoints.agis.ALL.json
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas      6844 Nov 28 05:21 init_data.xml
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas   2838541 Nov 28 05:21 log.47483661._002423.job.log.tgz.1
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas      8619 Nov 28 05:21 heartbeat.json
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas        29 Nov 28 05:22 wrapper_checkpoint.txt
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 05:22 boinc_mmap_file
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas        95 Nov 28 05:22 pilot_heartbeat.json
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas       823 Nov 28 05:22 pilotlog.txt
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas  14216923 Nov 28 05:22 log.47483661._002423.job.log.1
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas       353 Nov 28 05:22 output.list
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas       620 Nov 28 05:22 runtime_log
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas  17080320 Nov 28 05:22 result.tar.gz
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas       665 Nov 28 05:22 xZTNDmRtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrRKODmdWAXCo.diag
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas      8715 Nov 28 05:22 runtime_log.err
[2025-11-28 05:22:10] -rw-r--r--. 1 boincer umatlas     21154 Nov 28 05:22 stderr.txt
[2025-11-28 05:22:10] HITS file was successfully produced:
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas 925678492 Nov 28 05:20 shared/HITS.pool.root.1
[2025-11-28 05:22:10]  *** Contents of shared directory: ***
[2025-11-28 05:22:10] total 1322012
[2025-11-28 05:22:10] -rw-r--r--. 2 boincer umatlas 410365095 Nov 26 21:28 ATLAS.root_0
[2025-11-28 05:22:10] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 21:28 input.tar.gz
[2025-11-28 05:22:10] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 21:28 start_atlas.sh
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas 925678492 Nov 28 05:20 HITS.pool.root.1
[2025-11-28 05:22:10] -rw-------. 1 boincer umatlas  17080320 Nov 28 05:22 result.tar.gz
05:22:12 (1672447): run_atlas exited; CPU time 249899.503991
05:22:12 (1672447): called boinc_finish(0)

</stderr_txt>
]]>

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