Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:59:04 (2743694): wrapper (7.7.26015): starting
06:59:04 (2743694): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 06:59:04] Arguments: --nthreads 9
[2025-11-26 06:59:04] Threads: 9
[2025-11-26 06:59:04] Checking for CVMFS
[2025-11-26 06:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:59:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:59:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:59:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:59:06] 2.13.3.0 12977 30019 364820 153320 1 425 30178121 32935937 44315 16776704 0 158711120 99.565 174914196 32677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 06:59:06] CVMFS is ok
[2025-11-26 06:59:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:59:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:59:06] Further information can be found at the LHC@home message board.
[2025-11-26 06:59:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:59:06] Checking for apptainer binary...
[2025-11-26 06:59:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:59:06] Running /usr/bin/apptainer --version
[2025-11-26 06:59:06] apptainer version 1.4.4-1.el9
[2025-11-26 06:59:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:59:07] c6-12-29-1.aglt2.org
[2025-11-26 06:59:07] apptainer works
[2025-11-26 06:59:07] Set ATHENA_PROC_NUMBER=9
[2025-11-26 06:59:07] Set ATHENA_CORE_NUMBER=9
[2025-11-26 06:59:07] Starting ATLAS job with PandaID=6896715651
[2025-11-26 06:59:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:02:46]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:02:46] 2025-11-27 09:01:56,742 | INFO     | monitor loop #4184: job 0:6896715651 is in state 'finished'
[2025-11-27 04:02:46] 2025-11-27 09:01:56,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:02:46] 2025-11-27 09:01:57,183 | INFO     | time since job start (75703s) is within the limit (172800.0s)
[2025-11-27 04:02:46] 2025-11-27 09:01:59,200 | INFO     | time since job start (75705s) is within the limit (172800.0s)
[2025-11-27 04:02:46] 2025-11-27 09:01:59,247 | INFO     | monitor loop #4185: job 0:6896715651 is in state 'finished'
[2025-11-27 04:02:46] 2025-11-27 09:01:59,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:02:46] 2025-11-27 09:02:01,223 | INFO     | time since job start (75707s) is within the limit (172800.0s)
[2025-11-27 04:02:46] 2025-11-27 09:02:01,770 | INFO     | monitor loop #4186: job 0:6896715651 is in state 'finished'
[2025-11-27 04:02:46] 2025-11-27 09:02:01,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:02:46] 2025-11-27 09:02:03,231 | INFO     | time since job start (75709s) is within the limit (172800.0s)
[2025-11-27 04:02:46] 2025-11-27 09:02:03,572 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 04:02:46] 2025-11-27 09:02:03,583 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2735.675385416666
[2025-11-27 04:02:46] 2025-11-27 09:02:03,611 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896715651/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:02:46] 2025-11-27 09:02:03,612 | INFO     | extracted standard info from prmon json
[2025-11-27 04:02:46] 2025-11-27 09:02:03,612 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:02:46] 2025-11-27 09:02:03,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:02:46] 2025-11-27 09:02:03,654 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:02:46] 2025-11-27 09:02:03,656 | INFO     | sum of square deviations: 589794191577.6459
[2025-11-27 04:02:46] 2025-11-27 09:02:03,726 | INFO     | sum of deviations: 3996599037991.837
[2025-11-27 04:02:46] 2025-11-27 09:02:03,730 | INFO     | mean x: 1764196305.3292978
[2025-11-27 04:02:46] 2025-11-27 09:02:03,731 | INFO     | mean y: 3034729.8361581923
[2025-11-27 04:02:46] 2025-11-27 09:02:03,731 | INFO     | intersect: -11951618872.037428
[2025-11-27 04:02:46] 2025-11-27 09:02:03,732 | INFO     | chi2: 14.524738820782224
[2025-11-27 04:02:46] 2025-11-27 09:02:03,734 | INFO     | sum of square deviations: 582683239636.2754
[2025-11-27 04:02:46] 2025-11-27 09:02:03,792 | INFO     | sum of deviations: 4425861267664.768
[2025-11-27 04:02:46] 2025-11-27 09:02:03,792 | INFO     | mean x: 1764196152.834684
[2025-11-27 04:02:46] 2025-11-27 09:02:03,793 | INFO     | mean y: 3043933.8419773094
[2025-11-27 04:02:46] 2025-11-27 09:02:03,793 | INFO     | intersect: -13397182621.959099
[2025-11-27 04:02:46] 2025-11-27 09:02:03,794 | INFO     | chi2: 11.442147034877618
[2025-11-27 04:02:46] 2025-11-27 09:02:03,798 | INFO     | current chi2=11.442147034877618 (change=21.223044516945016 %)
[2025-11-27 04:02:46] 2025-11-27 09:02:03,799 | INFO     | right removable region: 1233
[2025-11-27 04:02:46] 2025-11-27 09:02:03,800 | INFO     | sum of square deviations: 582682234966.2753
[2025-11-27 04:02:46] 2025-11-27 09:02:03,863 | INFO     | sum of deviations: 3473473791127.467
[2025-11-27 04:02:46] 2025-11-27 09:02:03,864 | INFO     | mean x: 1764196457.834684
[2025-11-27 04:02:46] 2025-11-27 09:02:03,864 | INFO     | mean y: 3045945.8209076175
[2025-11-27 04:02:46] 2025-11-27 09:02:03,864 | INFO     | intersect: -10513647014.697033
[2025-11-27 04:02:46] 2025-11-27 09:02:03,866 | INFO     | chi2: 10.389967694928993
[2025-11-27 04:02:46] 2025-11-27 09:02:03,866 | INFO     | current chi2=10.389967694928993 (change=28.46709449905657 %)
[2025-11-27 04:02:46] 2025-11-27 09:02:03,867 | INFO     | sum of square deviations: 575627674779.8333
[2025-11-27 04:02:46] 2025-11-27 09:02:03,962 | INFO     | sum of deviations: 3077903312466.8145
[2025-11-27 04:02:46] 2025-11-27 09:02:03,962 | INFO     | mean x: 1764196610.3401139
[2025-11-27 04:02:46] 2025-11-27 09:02:03,989 | INFO     | mean y: 3054494.1822620016
[2025-11-27 04:02:46] 2025-11-27 09:02:03,989 | INFO     | intersect: -9430172622.43517
[2025-11-27 04:02:46] 2025-11-27 09:02:03,990 | INFO     | chi2: 8.149000883181202
[2025-11-27 04:02:46] 2025-11-27 09:02:03,991 | INFO     | current chi2=8.149000883181202 (change=21.568563806425832 %)
[2025-11-27 04:02:46] 2025-11-27 09:02:03,991 | INFO     | left removable region: 20
[2025-11-27 04:02:46] 2025-11-27 09:02:03,992 | INFO     | sum of square deviations: 553437729282.9962
[2025-11-27 04:02:46] 2025-11-27 09:02:04,220 | INFO     | sum of deviations: 3356138340411.928
[2025-11-27 04:02:46] 2025-11-27 09:02:04,220 | INFO     | mean x: 1764196732.3528442
[2025-11-27 04:02:46] 2025-11-27 09:02:04,220 | INFO     | mean y: 3071679.369332234
[2025-11-27 04:02:46] 2025-11-27 09:02:04,220 | INFO     | intersect: -10695310415.305714
[2025-11-27 04:02:46] 2025-11-27 09:02:04,246 | INFO     | chi2: 3.8317979857091515
[2025-11-27 04:02:46] 2025-11-27 09:02:04,247 | INFO     | current memory leak: 6.06 B/s (using 1213 data points, chi2=3.83)
[2025-11-27 04:02:46] 2025-11-27 09:02:04,248 | INFO     | could have reported an average CPU frequency of 2643 MHz (45 samples)
[2025-11-27 04:02:46] 2025-11-27 09:02:04,248 | INFO     | ..............................
[2025-11-27 04:02:46] 2025-11-27 09:02:04,265 | INFO     | . Timing measurements:
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . get job = 0 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . initial setup = 6 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . payload setup = 41 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . stage-in = 0 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . payload execution = 75564 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . stage-out = 8 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | . log creation = 1 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,266 | INFO     | ..............................
[2025-11-27 04:02:46] 2025-11-27 09:02:04,861 | INFO     | 
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | job summary report
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | --------------------------------------------------
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | PanDA job id: 6896715651
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | task id: 47556173
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | errors: (none)
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | pilot state: finished 
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | transexitcode: 0
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | exeerrorcode: 0
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | exeerrordiag: 
[2025-11-27 04:02:46] 2025-11-27 09:02:04,862 | INFO     | exitcode: 0
[2025-11-27 04:02:46] 2025-11-27 09:02:04,877 | INFO     | exitmsg: OK
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | cpuconsumptiontime: 271014 s
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | nevents: 1000
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | neventsw: 0
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | pid: 2768228
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | pgrp: 2768228
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | corecount: 9
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | event service: False
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | sizes: {0: 2284091, 1: 2284119, 2: 2284318, 13: 2284318, 24: 2284374, 28: 2284664, 35: 2284820, 75610: 2343615, 75619: 2352609, 75620: 2352665, 75649: 2352911}
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | --------------------------------------------------
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | 
[2025-11-27 04:02:46] 2025-11-27 09:02:04,878 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:02:46] 2025-11-27 09:02:04,967 | INFO     | job 6896715651 has completed (purged errors)
[2025-11-27 04:02:46] 2025-11-27 09:02:04,968 | INFO     | overall cleanup function is called
[2025-11-27 04:02:46] 2025-11-27 09:02:05,995 | INFO     | --- collectZombieJob: --- 10, [2768228]
[2025-11-27 04:02:46] 2025-11-27 09:02:05,996 | INFO     | zombie collector waiting for pid 2768228
[2025-11-27 04:02:46] 2025-11-27 09:02:05,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:02:46] 2025-11-27 09:02:05,996 | INFO     | collected zombie processes
[2025-11-27 04:02:46] 2025-11-27 09:02:05,996 | INFO     | will attempt to kill all subprocesses of pid=2768228
[2025-11-27 04:02:46] 2025-11-27 09:02:08,027 | INFO     | process IDs to be killed: [2768228] (in reverse order)
[2025-11-27 04:02:46] 2025-11-27 09:02:08,740 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:02:46] 2025-11-27 09:02:08,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:02:46] 2025-11-27 09:02:08,934 | INFO     | did not find any defunct processes belonging to 2768228
[2025-11-27 04:02:46] 2025-11-27 09:02:08,965 | INFO     | did not find any defunct processes belonging to 2768228
[2025-11-27 04:02:46] 2025-11-27 09:02:08,966 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:02:46] 2025-11-27 09:02:08,966 | INFO     | ready for new job
[2025-11-27 04:02:46] 2025-11-27 09:02:08,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:02:46] 2025-11-27 09:02:08,971 | INFO     | ***************************************
[2025-11-27 04:02:46] 2025-11-27 09:02:08,971 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:02:46] 2025-11-27 09:02:08,971 | INFO     | ***************************************
[2025-11-27 04:02:46] 2025-11-27 09:02:08,971 | INFO     | 
[2025-11-27 04:02:46] 2025-11-27 09:02:08,977 | INFO     | architecture information:
[2025-11-27 04:02:46] 2025-11-27 09:02:08,981 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:02:46] 2025-11-27 09:02:09,056 | INFO     | cat /etc/os-release:
[2025-11-27 04:02:46] NAME="CentOS Linux"
[2025-11-27 04:02:46] VERSION="7 (Core)"
[2025-11-27 04:02:46] ID="centos"
[2025-11-27 04:02:46] ID_LIKE="rhel fedora"
[2025-11-27 04:02:46] VERSION_ID="7"
[2025-11-27 04:02:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:02:46] ANSI_COLOR="0;31"
[2025-11-27 04:02:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:02:46] HOME_URL="https://www.centos.org/"
[2025-11-27 04:02:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:02:46] 
[2025-11-27 04:02:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:02:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:02:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:02:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:02:46] 
[2025-11-27 04:02:46] 2025-11-27 09:02:09,056 | INFO     | ***************************************
[2025-11-27 04:02:46] 2025-11-27 09:02:09,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 04:02:46] 2025-11-27 09:02:09,648 | INFO     | sufficient remaining disk space (88142249984 B)
[2025-11-27 04:02:46] 2025-11-27 09:02:09,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:02:46] 2025-11-27 09:02:09,649 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:02:46] 2025-11-27 09:02:09,649 | INFO     | update_server=False
[2025-11-27 04:02:46] 2025-11-27 09:02:09,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:02:46] 2025-11-27 09:02:09,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:02:46] 2025-11-27 09:02:09,863 | INFO     | all data control threads have been joined
[2025-11-27 04:02:46] 2025-11-27 09:02:10,157 | INFO     | all job control threads have been joined
[2025-11-27 04:02:46] 2025-11-27 09:02:10,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:02:46] 2025-11-27 09:02:10,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:02:46] 2025-11-27 09:02:10,340 | INFO     | aborting loop
[2025-11-27 04:02:46] 2025-11-27 09:02:10,654 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:10,655 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:10,869 | INFO     | [data] control thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:10,967 | INFO     | all payload control threads have been joined
[2025-11-27 04:02:46] 2025-11-27 09:02:11,163 | INFO     | [job] control thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,345 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,378 | INFO     | [job] validate thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,384 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,385 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,483 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,606 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,710 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,891 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:11,973 | INFO     | [payload] control thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:12,263 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:12,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:02:46] 2025-11-27 09:02:16,491 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:02:46] 2025-11-27 09:02:31,239 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:02:46] 2025-11-27 09:02:31,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481664767808)>', '<ExcThread(monitor, started 140481157637888)>']
[2025-11-27 04:02:46] 2025-11-27 09:02:36,645 | INFO     | all workflow threads have been joined
[2025-11-27 04:02:46] 2025-11-27 09:02:36,646 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:02:46] 2025-11-27 09:02:36,646 | INFO     | traces error code: 0
[2025-11-27 04:02:46] 2025-11-27 09:02:36,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:02:46] 2025-11-27 09:02:42,809 | INFO     | PID=2759014 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:02:46] 2025-11-27 09:02:42,809 | INFO     | .. there are 66 such processes running
[2025-11-27 04:02:46] 2025-11-27 09:02:42,809 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:02:46] 2025-11-27 09:02:42,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:02:46] 2025-11-27 09:02:42,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:02:46] 2025-11-27 09:02:42,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:02:46] 2025-11-27 09:02:42,810 | INFO     | [monitor] control thread has ended
[2025-11-27 04:02:46] 2025-11-27 09:02:45,493 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:02:46] 2025-11-27 09:02:45,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:02:46] 2025-11-27 09:02:45,513 [wrapper] pilotpid: 2759014
[2025-11-27 04:02:46] 2025-11-27 09:02:45,530 [wrapper] Pilot exit status: 0
[2025-11-27 04:02:46] 2025-11-27 09:02:45,593 [wrapper] pandaids: 6896715651
[2025-11-27 04:02:46] 2025-11-27 09:02:45,747 [wrapper] cleanup supervisor_pilot  510292 2759015
[2025-11-27 04:02:46] 2025-11-27 09:02:45,794 [wrapper] Test setup, not cleaning
[2025-11-27 04:02:46] 2025-11-27 09:02:45,812 [wrapper] apfmon messages muted
[2025-11-27 04:02:46] 2025-11-27 09:02:45,822 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:02:46] 2025-11-27 09:02:45,839 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:02:46]  *** Error codes and diagnostics ***
[2025-11-27 04:02:46]     "exeErrorCode": 0,
[2025-11-27 04:02:46]     "exeErrorDiag": "",
[2025-11-27 04:02:46]     "pilotErrorCode": 0,
[2025-11-27 04:02:46]     "pilotErrorDiag": "",
[2025-11-27 04:02:46]  *** Listing of results directory ***
[2025-11-27 04:02:46] total 1314852
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 02:04 pilot3.tar.gz
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 02:12 queuedata.json
[2025-11-27 04:02:46] -rwx------. 1 boincer umatlas     36292 Nov 25 02:16 runpilot2-wrapper.sh
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas       100 Nov 26 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:02:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 06:59 run_atlas
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas       105 Nov 26 06:59 job.xml
[2025-11-27 04:02:46] -rw-r--r--. 2 boincer umatlas 409929475 Nov 26 06:59 EVNT.47483658._003072.pool.root.1
[2025-11-27 04:02:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 06:59 start_atlas.sh
[2025-11-27 04:02:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 06:59 shared
[2025-11-27 04:02:46] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 06:59 input.tar.gz
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas         0 Nov 26 06:59 boinc_lockfile
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 06:59 pandaJob.out
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas        57 Nov 26 06:59 setup.sh.local
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas    991830 Nov 26 07:00 agis_schedconf.cvmfs.json
[2025-11-27 04:02:46] drwx------. 5 boincer umatlas      4096 Nov 26 07:00 pilot3
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:41 boinc_task_state.xml
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas      6881 Nov 27 03:56 init_data.xml
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas 909554534 Nov 27 04:00 HITS.47556173._000548.pool.root.1
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas      1059 Nov 27 04:01 memory_monitor_summary.json
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas   2416070 Nov 27 04:01 log.47556173._000548.job.log.tgz.1
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas        95 Nov 27 04:02 pilot_heartbeat.json
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas      8619 Nov 27 04:02 heartbeat.json
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas       823 Nov 27 04:02 pilotlog.txt
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:02 boinc_mmap_file
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:02 wrapper_checkpoint.txt
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas   9088932 Nov 27 04:02 log.47556173._000548.job.log.1
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas       353 Nov 27 04:02 output.list
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:02 runtime_log
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas  11520000 Nov 27 04:02 result.tar.gz
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 04:02 runtime_log.err
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas       662 Nov 27 04:02 FarKDm7S2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtEMKDmURPZSo.diag
[2025-11-27 04:02:46] -rw-r--r--. 1 boincer umatlas     21602 Nov 27 04:02 stderr.txt
[2025-11-27 04:02:46] HITS file was successfully produced:
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas 909554534 Nov 27 04:00 shared/HITS.pool.root.1
[2025-11-27 04:02:46]  *** Contents of shared directory: ***
[2025-11-27 04:02:46] total 1300420
[2025-11-27 04:02:46] -rw-r--r--. 2 boincer umatlas 409929475 Nov 26 06:59 ATLAS.root_0
[2025-11-27 04:02:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 06:59 start_atlas.sh
[2025-11-27 04:02:46] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 06:59 input.tar.gz
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas 909554534 Nov 27 04:00 HITS.pool.root.1
[2025-11-27 04:02:46] -rw-------. 1 boincer umatlas  11520000 Nov 27 04:02 result.tar.gz
04:02:48 (2743694): run_atlas exited; CPU time 274648.508489
04:02:48 (2743694): called boinc_finish(0)

</stderr_txt>
]]>

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