Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:47 (443986): wrapper (7.7.26015): starting
00:11:47 (443986): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:11:47] Arguments: --nthreads 8
[2025-11-26 00:11:47] Threads: 8
[2025-11-26 00:11:47] Checking for CVMFS
[2025-11-26 00:11:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:11:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:11:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:11:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:11:48] 2.13.2.0 6884 33908 218140 153310 1 81 30656930 40958878 28213 16776704 0 198361946 99.678 165194465 36764 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:11:48] CVMFS is ok
[2025-11-26 00:11:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:11:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:11:48] Further information can be found at the LHC@home message board.
[2025-11-26 00:11:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:11:48] Checking for apptainer binary...
[2025-11-26 00:11:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:11:48] Running /usr/bin/apptainer --version
[2025-11-26 00:11:48] apptainer version 1.4.4-1.el9
[2025-11-26 00:11:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:11:49] c-212-8.aglt2.org
[2025-11-26 00:11:49] apptainer works
[2025-11-26 00:11:49] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:11:49] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:11:49] Starting ATLAS job with PandaID=6896242877
[2025-11-26 00:11:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:43:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:43:25] 2025-11-27 21:41:49,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:43:25] 2025-11-27 21:41:51,083 | INFO     | time since job start (145754s) is within the limit (172800.0s)
[2025-11-27 16:43:25] 2025-11-27 21:41:51,676 | INFO     | monitor loop #8959: job 0:6896242877 is in state 'finished'
[2025-11-27 16:43:25] 2025-11-27 21:41:51,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:43:25] 2025-11-27 21:41:52,896 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 16:43:25] 2025-11-27 21:41:52,921 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3083.745124999999
[2025-11-27 16:43:25] 2025-11-27 21:41:52,990 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896242877/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:43:25] 2025-11-27 21:41:53,010 | INFO     | extracted standard info from prmon json
[2025-11-27 16:43:25] 2025-11-27 21:41:53,010 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:43:25] 2025-11-27 21:41:53,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:43:25] 2025-11-27 21:41:53,188 | INFO     | time since job start (145756s) is within the limit (172800.0s)
[2025-11-27 16:43:25] 2025-11-27 21:41:53,189 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:43:25] 2025-11-27 21:41:53,191 | INFO     | sum of square deviations: 4222176541120.1123
[2025-11-27 16:43:25] 2025-11-27 21:41:53,744 | INFO     | sum of deviations: 15211309838959.984
[2025-11-27 16:43:25] 2025-11-27 21:41:53,744 | INFO     | mean x: 1764206856.480737
[2025-11-27 16:43:25] 2025-11-27 21:41:53,744 | INFO     | mean y: 2900004.2927135676
[2025-11-27 16:43:25] 2025-11-27 21:41:53,744 | INFO     | intersect: -6353039131.029832
[2025-11-27 16:43:25] 2025-11-27 21:41:53,763 | INFO     | chi2: 13.13748032644298
[2025-11-27 16:43:25] 2025-11-27 21:41:53,766 | INFO     | sum of square deviations: 4195710253000.5947
[2025-11-27 16:43:25] 2025-11-27 21:41:54,209 | INFO     | monitor loop #8960: job 0:6896242877 is in state 'finished'
[2025-11-27 16:43:25] 2025-11-27 21:41:54,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:43:25] 2025-11-27 21:41:54,435 | INFO     | sum of deviations: 16029885194176.568
[2025-11-27 16:43:25] 2025-11-27 21:41:54,435 | INFO     | mean x: 1764206703.9869912
[2025-11-27 16:43:25] 2025-11-27 21:41:54,436 | INFO     | mean y: 2904720.662190516
[2025-11-27 16:43:25] 2025-11-27 21:41:54,436 | INFO     | intersect: -6737320227.7797165
[2025-11-27 16:43:25] 2025-11-27 21:41:54,456 | INFO     | chi2: 9.880027355503733
[2025-11-27 16:43:25] 2025-11-27 21:41:54,456 | INFO     | current chi2=9.880027355503733 (change=24.79511207626838 %)
[2025-11-27 16:43:25] 2025-11-27 21:41:54,456 | INFO     | right removable region: 2382
[2025-11-27 16:43:25] 2025-11-27 21:41:54,479 | INFO     | sum of square deviations: 4195705911020.595
[2025-11-27 16:43:25] 2025-11-27 21:41:55,112 | INFO     | sum of deviations: 14268491126183.807
[2025-11-27 16:43:25] 2025-11-27 21:41:55,112 | INFO     | mean x: 1764207008.9869912
[2025-11-27 16:43:25] 2025-11-27 21:41:55,112 | INFO     | mean y: 2905435.8657154846
[2025-11-27 16:43:25] 2025-11-27 21:41:55,112 | INFO     | intersect: -5996698107.92961
[2025-11-27 16:43:25] 2025-11-27 21:41:55,133 | INFO     | chi2: 9.22735298561604
[2025-11-27 16:43:25] 2025-11-27 21:41:55,133 | INFO     | current chi2=9.22735298561604 (change=29.763145166860323 %)
[2025-11-27 16:43:25] 2025-11-27 21:41:55,135 | INFO     | sum of square deviations: 4169347282012.2593
[2025-11-27 16:43:25] 2025-11-27 21:41:55,322 | INFO     | time since job start (145758s) is within the limit (172800.0s)
[2025-11-27 16:43:25] 2025-11-27 21:41:55,884 | INFO     | sum of deviations: 13741996717049.086
[2025-11-27 16:43:25] 2025-11-27 21:41:55,884 | INFO     | mean x: 1764207161.4899075
[2025-11-27 16:43:25] 2025-11-27 21:41:55,884 | INFO     | mean y: 2908480.3587047937
[2025-11-27 16:43:25] 2025-11-27 21:41:55,885 | INFO     | intersect: -5811845576.225424
[2025-11-27 16:43:25] 2025-11-27 21:41:55,906 | INFO     | chi2: 7.917572993184024
[2025-11-27 16:43:25] 2025-11-27 21:41:55,906 | INFO     | current chi2=7.917572993184024 (change=14.194536553156173 %)
[2025-11-27 16:43:25] 2025-11-27 21:41:55,906 | INFO     | left removable region: 20
[2025-11-27 16:43:25] 2025-11-27 21:41:55,908 | INFO     | sum of square deviations: 4085758920289.5063
[2025-11-27 16:43:25] 2025-11-27 21:41:56,633 | INFO     | sum of deviations: 14314840291671.893
[2025-11-27 16:43:25] 2025-11-27 21:41:56,634 | INFO     | mean x: 1764207283.464437
[2025-11-27 16:43:25] 2025-11-27 21:41:56,634 | INFO     | mean y: 2916996.647332769
[2025-11-27 16:43:25] 2025-11-27 21:41:56,634 | INFO     | intersect: -6178148993.024
[2025-11-27 16:43:25] 2025-11-27 21:41:56,666 | INFO     | chi2: 3.5472460634357525
[2025-11-27 16:43:25] 2025-11-27 21:41:56,667 | INFO     | current memory leak: 3.50 B/s (using 2362 data points, chi2=3.55)
[2025-11-27 16:43:25] 2025-11-27 21:41:56,718 | INFO     | could have reported an average CPU frequency of 3116 MHz (83 samples)
[2025-11-27 16:43:25] 2025-11-27 21:41:56,718 | INFO     | ..............................
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . Timing measurements:
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . get job = 0 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . initial setup = 3 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . payload setup = 31 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . stage-in = 0 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . payload execution = 145644 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . stage-out = 8 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | . log creation = 1 s
[2025-11-27 16:43:25] 2025-11-27 21:41:56,719 | INFO     | ..............................
[2025-11-27 16:43:25] 2025-11-27 21:41:57,411 | INFO     | time since job start (145760s) is within the limit (172800.0s)
[2025-11-27 16:43:25] 2025-11-27 21:41:57,438 | INFO     | 
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | job summary report
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | --------------------------------------------------
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | PanDA job id: 6896242877
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | task id: 47556173
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | errors: (none)
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | pilot state: finished 
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | transexitcode: 0
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | exeerrorcode: 0
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | exeerrordiag: 
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | exitcode: 0
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | exitmsg: OK
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | cpuconsumptiontime: 217213 s
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | nevents: 1000
[2025-11-27 16:43:25] 2025-11-27 21:41:57,439 | INFO     | neventsw: 0
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | pid: 498919
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | pgrp: 498919
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | corecount: 8
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | event service: False
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | sizes: {0: 2284085, 1: 2284169, 2: 2284368, 3: 2284368, 14: 2284396, 23: 2284686, 24: 2284842, 145678: 2379248, 145679: 2379247, 145688: 2388297, 145690: 2388353, 
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | --------------------------------------------------
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | 
[2025-11-27 16:43:25] 2025-11-27 21:41:57,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 16:43:25] 2025-11-27 21:41:57,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:43:25] 2025-11-27 21:41:57,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,486 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:43:25] 2025-11-27 21:41:57,486 | INFO     | job 6896242877 has completed (purged errors)
[2025-11-27 16:43:25] 2025-11-27 21:41:57,486 | INFO     | overall cleanup function is called
[2025-11-27 16:43:25] 2025-11-27 21:41:58,507 | INFO     | --- collectZombieJob: --- 10, [498919]
[2025-11-27 16:43:25] 2025-11-27 21:41:58,508 | INFO     | zombie collector waiting for pid 498919
[2025-11-27 16:43:25] 2025-11-27 21:41:58,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:43:25] 2025-11-27 21:41:58,509 | INFO     | collected zombie processes
[2025-11-27 16:43:25] 2025-11-27 21:41:58,509 | INFO     | will attempt to kill all subprocesses of pid=498919
[2025-11-27 16:43:25] 2025-11-27 21:42:00,845 | INFO     | process IDs to be killed: [498919] (in reverse order)
[2025-11-27 16:43:25] 2025-11-27 21:42:01,210 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:43:25] 2025-11-27 21:42:01,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:43:25] 2025-11-27 21:42:01,369 | INFO     | did not find any defunct processes belonging to 498919
[2025-11-27 16:43:25] 2025-11-27 21:42:01,498 | INFO     | did not find any defunct processes belonging to 498919
[2025-11-27 16:43:25] 2025-11-27 21:42:01,499 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:43:25] 2025-11-27 21:42:01,499 | INFO     | ready for new job
[2025-11-27 16:43:25] 2025-11-27 21:42:01,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:43:25] 2025-11-27 21:42:01,565 | INFO     | ***************************************
[2025-11-27 16:43:25] 2025-11-27 21:42:01,566 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:43:25] 2025-11-27 21:42:01,566 | INFO     | ***************************************
[2025-11-27 16:43:25] 2025-11-27 21:42:01,566 | INFO     | 
[2025-11-27 16:43:25] 2025-11-27 21:42:01,590 | INFO     | architecture information:
[2025-11-27 16:43:25] 2025-11-27 21:42:01,606 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:43:25] 2025-11-27 21:42:01,799 | INFO     | cat /etc/os-release:
[2025-11-27 16:43:25] NAME="CentOS Linux"
[2025-11-27 16:43:25] VERSION="7 (Core)"
[2025-11-27 16:43:25] ID="centos"
[2025-11-27 16:43:25] ID_LIKE="rhel fedora"
[2025-11-27 16:43:25] VERSION_ID="7"
[2025-11-27 16:43:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:43:25] ANSI_COLOR="0;31"
[2025-11-27 16:43:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:43:25] HOME_URL="https://www.centos.org/"
[2025-11-27 16:43:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:43:25] 
[2025-11-27 16:43:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:43:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:43:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:43:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:43:25] 
[2025-11-27 16:43:25] 2025-11-27 21:42:01,799 | INFO     | ***************************************
[2025-11-27 16:43:25] 2025-11-27 21:42:02,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 16:43:25] 2025-11-27 21:42:02,391 | INFO     | sufficient remaining disk space (123362869248 B)
[2025-11-27 16:43:25] 2025-11-27 21:42:02,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:43:25] 2025-11-27 21:42:02,392 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:43:25] 2025-11-27 21:42:02,392 | INFO     | update_server=False
[2025-11-27 16:43:25] 2025-11-27 21:42:02,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:43:25] 2025-11-27 21:42:02,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:43:25] 2025-11-27 21:42:02,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:43:25] 2025-11-27 21:42:02,498 | INFO     | all data control threads have been joined
[2025-11-27 16:43:25] 2025-11-27 21:42:02,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:43:25] 2025-11-27 21:42:02,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:43:25] 2025-11-27 21:42:02,875 | INFO     | aborting loop
[2025-11-27 16:43:25] 2025-11-27 21:42:03,165 | INFO     | all payload control threads have been joined
[2025-11-27 16:43:25] 2025-11-27 21:42:03,398 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:03,468 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:03,505 | INFO     | [data] control thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:03,553 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:03,656 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:03,880 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:03,942 | INFO     | all job control threads have been joined
[2025-11-27 16:43:25] 2025-11-27 21:42:04,058 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,171 | INFO     | [payload] control thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,405 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,477 | INFO     | [job] validate thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,580 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,792 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,793 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:04,948 | INFO     | [job] control thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:06,415 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:43:25] 2025-11-27 21:42:32,582 | INFO     | PID=457291 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 16:43:25] 2025-11-27 21:42:32,582 | INFO     | .. there are 37 such processes running
[2025-11-27 16:43:25] 2025-11-27 21:42:32,583 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:43:25] 2025-11-27 21:42:32,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:43:25] 2025-11-27 21:42:32,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:43:25] 2025-11-27 21:42:47,904 [wrapper] supervise_pilot (15 min periods counter: 163)
[2025-11-27 16:43:25] 2025-11-27 21:42:58,739 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:43:25] 2025-11-27 21:42:58,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177576437568)>', '<ExcThread(monitor, started 140177229985536)>']
[2025-11-27 16:43:25] 2025-11-27 21:42:59,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:43:25] 2025-11-27 21:42:59,803 | INFO     | [monitor] control thread has ended
[2025-11-27 16:43:25] 2025-11-27 21:43:04,020 | INFO     | all workflow threads have been joined
[2025-11-27 16:43:25] 2025-11-27 21:43:04,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:43:25] 2025-11-27 21:43:04,021 | INFO     | traces error code: 0
[2025-11-27 16:43:25] 2025-11-27 21:43:04,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:43:25] 2025-11-27 21:43:04,956 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:43:25] 2025-11-27 21:43:05,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:43:25] 2025-11-27 21:43:05,034 [wrapper] pilotpid: 457291
[2025-11-27 16:43:25] 2025-11-27 21:43:05,083 [wrapper] Pilot exit status: 0
[2025-11-27 16:43:25] 2025-11-27 21:43:05,223 [wrapper] pandaids: 6896242877
[2025-11-27 16:43:25] 2025-11-27 21:43:06,149 [wrapper] cleanup supervisor_pilot 2730279 457292
[2025-11-27 16:43:25] 2025-11-27 21:43:06,194 [wrapper] Test setup, not cleaning
[2025-11-27 16:43:25] 2025-11-27 21:43:06,240 [wrapper] apfmon messages muted
[2025-11-27 16:43:25] 2025-11-27 21:43:06,266 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:43:25] 2025-11-27 21:43:06,295 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:43:25]  *** Error codes and diagnostics ***
[2025-11-27 16:43:25]     "exeErrorCode": 0,
[2025-11-27 16:43:25]     "exeErrorDiag": "",
[2025-11-27 16:43:25]     "pilotErrorCode": 0,
[2025-11-27 16:43:25]     "pilotErrorDiag": "",
[2025-11-27 16:43:25]  *** Listing of results directory ***
[2025-11-27 16:43:25] total 1343140
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 15:01 pilot3.tar.gz
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 15:16 queuedata.json
[2025-11-27 16:43:25] -rwx------. 1 boincer umatlas     36292 Nov 24 15:19 runpilot2-wrapper.sh
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:43:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:11 run_atlas
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:11 job.xml
[2025-11-27 16:43:25] -rw-r--r--. 2 boincer umatlas 409154770 Nov 26 00:11 EVNT.47483658._003053.pool.root.1
[2025-11-27 16:43:25] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 00:11 input.tar.gz
[2025-11-27 16:43:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:11 start_atlas.sh
[2025-11-27 16:43:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:11 shared
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:11 boinc_lockfile
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:11 pandaJob.out
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas        57 Nov 26 00:11 setup.sh.local
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas    991877 Nov 26 00:12 agis_schedconf.cvmfs.json
[2025-11-27 16:43:25] drwx------. 5 boincer umatlas      4096 Nov 26 00:12 pilot3
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas       534 Nov 27 16:27 boinc_task_state.xml
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 16:39 init_data.xml
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas 918759790 Nov 27 16:40 HITS.47556173._000356.pool.root.1
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas      1080 Nov 27 16:41 memory_monitor_summary.json
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas   3160314 Nov 27 16:41 log.47556173._000356.job.log.tgz.1
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas        95 Nov 27 16:41 pilot_heartbeat.json
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas      8629 Nov 27 16:41 heartbeat.json
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas      4824 Nov 27 16:43 pilotlog.txt
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas  18606982 Nov 27 16:43 log.47556173._000356.job.log.1
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas       353 Nov 27 16:43 output.list
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:43 runtime_log
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas  21790720 Nov 27 16:43 result.tar.gz
[2025-11-27 16:43:25] -rw-------. 1 boincer umatlas       669 Nov 27 16:43 Sl9KDmBDsh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLCJKDmZDHpEn.diag
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas      9339 Nov 27 16:43 runtime_log.err
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas        30 Nov 27 16:43 wrapper_checkpoint.txt
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:43 boinc_mmap_file
[2025-11-27 16:43:25] -rw-r--r--. 1 boincer umatlas     21572 Nov 27 16:43 stderr.txt
[2025-11-27 16:43:26] HITS file was successfully produced:
[2025-11-27 16:43:26] -rw-------. 1 boincer umatlas 918759790 Nov 27 16:40 shared/HITS.pool.root.1
[2025-11-27 16:43:26]  *** Contents of shared directory: ***
[2025-11-27 16:43:26] total 1318680
[2025-11-27 16:43:26] -rw-r--r--. 2 boincer umatlas 409154770 Nov 26 00:11 ATLAS.root_0
[2025-11-27 16:43:26] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 00:11 input.tar.gz
[2025-11-27 16:43:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:11 start_atlas.sh
[2025-11-27 16:43:26] -rw-------. 1 boincer umatlas 918759790 Nov 27 16:40 HITS.pool.root.1
[2025-11-27 16:43:26] -rw-------. 1 boincer umatlas  21790720 Nov 27 16:43 result.tar.gz
16:43:28 (443986): run_atlas exited; CPU time 220213.274427
16:43:28 (443986): called boinc_finish(0)

</stderr_txt>
]]>

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