Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:17 (430501): wrapper (7.7.26015): starting
00:10:17 (430501): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:10:17] Arguments: --nthreads 9
[2025-11-26 00:10:17] Threads: 9
[2025-11-26 00:10:17] Checking for CVMFS
[2025-11-26 00:10:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:10:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:10:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:10:19] 2.13.2.0 6902 34673 224112 153310 3 74 24284534 40960001 25646 16776704 0 118649275 99.603 127415719 40260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:10:19] CVMFS is ok
[2025-11-26 00:10:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:10:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:10:19] Further information can be found at the LHC@home message board.
[2025-11-26 00:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:10:19] Checking for apptainer binary...
[2025-11-26 00:10:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:10:19] Running /usr/bin/apptainer --version
[2025-11-26 00:10:19] apptainer version 1.4.4-1.el9
[2025-11-26 00:10:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:10:20] c-212-6.aglt2.org
[2025-11-26 00:10:20] apptainer works
[2025-11-26 00:10:20] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:10:20] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:10:20] Starting ATLAS job with PandaID=6891107017
[2025-11-26 00:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:30:38]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:30:38] 2025-11-27 14:30:04,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:30:38] 2025-11-27 14:30:04,435 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:30:38] 2025-11-27 14:30:04,437 | INFO     | sum of square deviations: 2349200469005.197
[2025-11-27 09:30:38] 2025-11-27 14:30:04,532 | INFO     | sum of deviations: 13240434400048.084
[2025-11-27 09:30:38] 2025-11-27 14:30:04,533 | INFO     | mean x: 1764193914.904786
[2025-11-27 09:30:38] 2025-11-27 14:30:04,533 | INFO     | mean y: 3023571.0646639513
[2025-11-27 09:30:38] 2025-11-27 14:30:04,533 | INFO     | intersect: -9940229083.38096
[2025-11-27 09:30:38] 2025-11-27 14:30:04,534 | INFO     | chi2: 17.152713717612816
[2025-11-27 09:30:38] 2025-11-27 14:30:04,536 | INFO     | sum of square deviations: 2331306898527.0884
[2025-11-27 09:30:38] 2025-11-27 14:30:04,615 | INFO     | sum of deviations: 13892161372167.2
[2025-11-27 09:30:38] 2025-11-27 14:30:04,616 | INFO     | mean x: 1764193762.4134762
[2025-11-27 09:30:38] 2025-11-27 14:30:04,616 | INFO     | mean y: 3029123.81827463
[2025-11-27 09:30:38] 2025-11-27 14:30:04,616 | INFO     | intersect: -10509728529.283157
[2025-11-27 09:30:38] 2025-11-27 14:30:04,617 | INFO     | chi2: 14.278239673478778
[2025-11-27 09:30:38] 2025-11-27 14:30:04,617 | INFO     | current chi2=14.278239673478778 (change=16.758129888114784 %)
[2025-11-27 09:30:38] 2025-11-27 14:30:04,618 | INFO     | right removable region: 1958
[2025-11-27 09:30:38] 2025-11-27 14:30:04,619 | INFO     | sum of square deviations: 2331302819457.085
[2025-11-27 09:30:38] 2025-11-27 14:30:04,690 | INFO     | sum of deviations: 12390826891301.904
[2025-11-27 09:30:38] 2025-11-27 14:30:04,690 | INFO     | mean x: 1764194067.4134762
[2025-11-27 09:30:38] 2025-11-27 14:30:04,690 | INFO     | mean y: 3030810.2618683004
[2025-11-27 09:30:38] 2025-11-27 14:30:04,690 | INFO     | intersect: -9373624641.590977
[2025-11-27 09:30:38] 2025-11-27 14:30:04,692 | INFO     | chi2: 12.675589730972254
[2025-11-27 09:30:38] 2025-11-27 14:30:04,692 | INFO     | current chi2=12.675589730972254 (change=26.101549063011202 %)
[2025-11-27 09:30:38] 2025-11-27 14:30:04,693 | INFO     | sum of square deviations: 2313496287896.1777
[2025-11-27 09:30:38] 2025-11-27 14:30:04,765 | INFO     | sum of deviations: 11658104828935.623
[2025-11-27 09:30:38] 2025-11-27 14:30:04,765 | INFO     | mean x: 1764194219.922211
[2025-11-27 09:30:38] 2025-11-27 14:30:04,766 | INFO     | mean y: 3037086.036847492
[2025-11-27 09:30:38] 2025-11-27 14:30:04,766 | INFO     | intersect: -8887040353.05798
[2025-11-27 09:30:38] 2025-11-27 14:30:04,767 | INFO     | chi2: 9.478937202874262
[2025-11-27 09:30:38] 2025-11-27 14:30:04,767 | INFO     | current chi2=9.478937202874262 (change=25.21896492347895 %)
[2025-11-27 09:30:38] 2025-11-27 14:30:04,769 | INFO     | sum of square deviations: 2295780641759.969
[2025-11-27 09:30:38] 2025-11-27 14:30:04,842 | INFO     | sum of deviations: 10933656079485.178
[2025-11-27 09:30:38] 2025-11-27 14:30:04,843 | INFO     | mean x: 1764194372.4309902
[2025-11-27 09:30:38] 2025-11-27 14:30:04,843 | INFO     | mean y: 3043321.778347871
[2025-11-27 09:30:38] 2025-11-27 14:30:04,843 | INFO     | intersect: -8398932971.016078
[2025-11-27 09:30:38] 2025-11-27 14:30:04,844 | INFO     | chi2: 6.384117927355916
[2025-11-27 09:30:38] 2025-11-27 14:30:04,844 | INFO     | current chi2=6.384117927355916 (change=32.64943325692584 %)
[2025-11-27 09:30:38] 2025-11-27 14:30:04,846 | INFO     | sum of square deviations: 2278155648485.9575
[2025-11-27 09:30:38] 2025-11-27 14:30:04,924 | INFO     | sum of deviations: 10393019733950.219
[2025-11-27 09:30:38] 2025-11-27 14:30:04,925 | INFO     | mean x: 1764194524.9398148
[2025-11-27 09:30:38] 2025-11-27 14:30:04,925 | INFO     | mean y: 3047999.762345679
[2025-11-27 09:30:38] 2025-11-27 14:30:04,925 | INFO     | intersect: -8045264469.322861
[2025-11-27 09:30:38] 2025-11-27 14:30:04,926 | INFO     | chi2: 4.833256580844293
[2025-11-27 09:30:38] 2025-11-27 14:30:04,927 | INFO     | current chi2=4.833256580844293 (change=24.292492152536678 %)
[2025-11-27 09:30:38] 2025-11-27 14:30:04,927 | INFO     | left removable region: 40
[2025-11-27 09:30:38] 2025-11-27 14:30:04,928 | INFO     | sum of square deviations: 2187965972074.5864
[2025-11-27 09:30:38] 2025-11-27 14:30:04,997 | INFO     | sum of deviations: 10166564056157.504
[2025-11-27 09:30:38] 2025-11-27 14:30:04,998 | INFO     | mean x: 1764194951.9728885
[2025-11-27 09:30:38] 2025-11-27 14:30:04,998 | INFO     | mean y: 3062559.0099061523
[2025-11-27 09:30:38] 2025-11-27 14:30:04,998 | INFO     | intersect: -8194414557.042181
[2025-11-27 09:30:38] 2025-11-27 14:30:04,999 | INFO     | chi2: 0.6272117746989266
[2025-11-27 09:30:38] 2025-11-27 14:30:05,000 | INFO     | current memory leak: 4.65 B/s (using 1918 data points, chi2=0.63)
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | could have reported an average CPU frequency of 3055 MHz (69 samples)
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | ..............................
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | . Timing measurements:
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | . get job = 0 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | . initial setup = 5 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | . payload setup = 55 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,001 | INFO     | . stage-in = 0 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,002 | INFO     | . payload execution = 119776 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,002 | INFO     | . stage-out = 4 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,002 | INFO     | . log creation = 1 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,002 | INFO     | ..............................
[2025-11-27 09:30:38] 2025-11-27 14:30:05,081 | INFO     | 
[2025-11-27 09:30:38] 2025-11-27 14:30:05,081 | INFO     | job summary report
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | --------------------------------------------------
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | PanDA job id: 6891107017
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | task id: 47483661
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | errors: (none)
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | pilot state: finished 
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | transexitcode: 0
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | exeerrorcode: 0
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | exeerrordiag: 
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | exitcode: 0
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | exitmsg: OK
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | cpuconsumptiontime: 217639 s
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | nevents: 1000
[2025-11-27 09:30:38] 2025-11-27 14:30:05,082 | INFO     | neventsw: 0
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | pid: 470616
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | pgrp: 470616
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | corecount: 9
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | event service: False
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | sizes: {0: 2284077, 1: 2284161, 2: 2284360, 13: 2284360, 24: 2284416, 30: 2284706, 35: 2284862, 119836: 2365426, 119837: 2365425, 119841: 2374475, 119842: 2374531,
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | --------------------------------------------------
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | 
[2025-11-27 09:30:38] 2025-11-27 14:30:05,083 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 09:30:38] 2025-11-27 14:30:05,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:30:38] 2025-11-27 14:30:05,118 | INFO     | job 6891107017 has completed (purged errors)
[2025-11-27 09:30:38] 2025-11-27 14:30:05,118 | INFO     | overall cleanup function is called
[2025-11-27 09:30:38] 2025-11-27 14:30:06,141 | INFO     | --- collectZombieJob: --- 10, [470616]
[2025-11-27 09:30:38] 2025-11-27 14:30:06,141 | INFO     | zombie collector waiting for pid 470616
[2025-11-27 09:30:38] 2025-11-27 14:30:06,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:30:38] 2025-11-27 14:30:06,143 | INFO     | collected zombie processes
[2025-11-27 09:30:38] 2025-11-27 14:30:06,143 | INFO     | will attempt to kill all subprocesses of pid=470616
[2025-11-27 09:30:38] 2025-11-27 14:30:06,627 | INFO     | process IDs to be killed: [470616] (in reverse order)
[2025-11-27 09:30:38] 2025-11-27 14:30:06,767 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:30:38] 2025-11-27 14:30:06,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:30:38] 2025-11-27 14:30:06,803 | INFO     | did not find any defunct processes belonging to 470616
[2025-11-27 09:30:38] 2025-11-27 14:30:06,863 | INFO     | did not find any defunct processes belonging to 470616
[2025-11-27 09:30:38] 2025-11-27 14:30:06,864 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:30:38] 2025-11-27 14:30:06,864 | INFO     | ready for new job
[2025-11-27 09:30:38] 2025-11-27 14:30:06,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:30:38] 2025-11-27 14:30:06,872 | INFO     | ***************************************
[2025-11-27 09:30:38] 2025-11-27 14:30:06,872 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:30:38] 2025-11-27 14:30:06,872 | INFO     | ***************************************
[2025-11-27 09:30:38] 2025-11-27 14:30:06,872 | INFO     | 
[2025-11-27 09:30:38] 2025-11-27 14:30:06,877 | INFO     | architecture information:
[2025-11-27 09:30:38] 2025-11-27 14:30:06,878 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:30:38] 2025-11-27 14:30:06,897 | INFO     | cat /etc/os-release:
[2025-11-27 09:30:38] NAME="CentOS Linux"
[2025-11-27 09:30:38] VERSION="7 (Core)"
[2025-11-27 09:30:38] ID="centos"
[2025-11-27 09:30:38] ID_LIKE="rhel fedora"
[2025-11-27 09:30:38] VERSION_ID="7"
[2025-11-27 09:30:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:30:38] ANSI_COLOR="0;31"
[2025-11-27 09:30:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:30:38] HOME_URL="https://www.centos.org/"
[2025-11-27 09:30:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:30:38] 
[2025-11-27 09:30:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:30:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:30:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:30:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:30:38] 
[2025-11-27 09:30:38] 2025-11-27 14:30:06,898 | INFO     | ***************************************
[2025-11-27 09:30:38] 2025-11-27 14:30:07,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 09:30:38] 2025-11-27 14:30:07,435 | INFO     | sufficient remaining disk space (125398155264 B)
[2025-11-27 09:30:38] 2025-11-27 14:30:07,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:30:38] 2025-11-27 14:30:07,436 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:30:38] 2025-11-27 14:30:07,436 | INFO     | update_server=False
[2025-11-27 09:30:38] 2025-11-27 14:30:07,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:30:38] 2025-11-27 14:30:07,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:30:38] 2025-11-27 14:30:07,768 | INFO     | all job control threads have been joined
[2025-11-27 09:30:38] 2025-11-27 14:30:07,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:30:38] 2025-11-27 14:30:07,877 | INFO     | aborting loop
[2025-11-27 09:30:38] 2025-11-27 14:30:07,919 | INFO     | all payload control threads have been joined
[2025-11-27 09:30:38] 2025-11-27 14:30:08,117 | INFO     | all data control threads have been joined
[2025-11-27 09:30:38] 2025-11-27 14:30:08,442 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:08,517 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:08,774 | INFO     | [job] control thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:08,884 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:08,925 | INFO     | [payload] control thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,003 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,124 | INFO     | [data] control thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,331 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,372 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,442 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,466 | INFO     | [job] validate thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,890 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:09,955 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:10,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:30:38] 2025-11-27 14:30:10,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:30:38] 2025-11-27 14:30:10,583 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:30:38] 2025-11-27 14:30:11,100 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:14,422 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:17,775 | INFO     | job.realtimelogging is not enabled
[2025-11-27 09:30:38] 2025-11-27 14:30:18,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:30:38] 2025-11-27 14:30:20,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723103651648)>', '<ExcThread(monitor, started 139722533893888)>']
[2025-11-27 09:30:38] 2025-11-27 14:30:25,731 | INFO     | all workflow threads have been joined
[2025-11-27 09:30:38] 2025-11-27 14:30:25,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:30:38] 2025-11-27 14:30:25,732 | INFO     | traces error code: 0
[2025-11-27 09:30:38] 2025-11-27 14:30:25,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:30:38] 2025-11-27 14:30:37,828 | INFO     | PID=442456 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 09:30:38] 2025-11-27 14:30:37,828 | INFO     | .. there are 23 such processes running
[2025-11-27 09:30:38] 2025-11-27 14:30:37,829 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:30:38] 2025-11-27 14:30:37,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:30:38] 2025-11-27 14:30:37,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:30:38] 2025-11-27 14:30:37,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:30:38] 2025-11-27 14:30:37,829 | INFO     | [monitor] control thread has ended
[2025-11-27 09:30:38] 2025-11-27 14:30:37,952 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:30:38] 2025-11-27 14:30:37,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:30:38] 2025-11-27 14:30:37,967 [wrapper] pilotpid: 442456
[2025-11-27 09:30:38] 2025-11-27 14:30:37,972 [wrapper] Pilot exit status: 0
[2025-11-27 09:30:38] 2025-11-27 14:30:38,008 [wrapper] pandaids: 6891107017
[2025-11-27 09:30:38] 2025-11-27 14:30:38,113 [wrapper] cleanup supervisor_pilot 2675212 442457
[2025-11-27 09:30:38] 2025-11-27 14:30:38,122 [wrapper] Test setup, not cleaning
[2025-11-27 09:30:38] 2025-11-27 14:30:38,129 [wrapper] apfmon messages muted
[2025-11-27 09:30:38] 2025-11-27 14:30:38,132 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:30:38] 2025-11-27 14:30:38,136 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:30:38]  *** Error codes and diagnostics ***
[2025-11-27 09:30:38]     "exeErrorCode": 0,
[2025-11-27 09:30:38]     "exeErrorDiag": "",
[2025-11-27 09:30:38]     "pilotErrorCode": 0,
[2025-11-27 09:30:38]     "pilotErrorDiag": "",
[2025-11-27 09:30:38]  *** Listing of results directory ***
[2025-11-27 09:30:38] total 1335928
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-27 09:30:38] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:30:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:10 run_atlas
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:10 job.xml
[2025-11-27 09:30:38] -rw-r--r--. 2 boincer umatlas 410190027 Nov 26 00:10 EVNT.47483658._000285.pool.root.1
[2025-11-27 09:30:38] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:10 input.tar.gz
[2025-11-27 09:30:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:10 start_atlas.sh
[2025-11-27 09:30:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:10 shared
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:10 boinc_lockfile
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:10 pandaJob.out
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas    991877 Nov 26 00:11 agis_schedconf.cvmfs.json
[2025-11-27 09:30:38] drwx------. 5 boincer umatlas      4096 Nov 26 00:11 pilot3
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:21 boinc_task_state.xml
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas 918145757 Nov 27 09:29 HITS.47483661._002549.pool.root.1
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 09:29 init_data.xml
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas      1064 Nov 27 09:29 memory_monitor_summary.json
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas   2952315 Nov 27 09:29 log.47483661._002549.job.log.tgz.1
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas      8599 Nov 27 09:30 heartbeat.json
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:30 boinc_mmap_file
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:30 wrapper_checkpoint.txt
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas        95 Nov 27 09:30 pilot_heartbeat.json
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas       822 Nov 27 09:30 pilotlog.txt
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas  14915459 Nov 27 09:30 log.47483661._002549.job.log.1
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas       353 Nov 27 09:30 output.list
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:30 runtime_log
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas  17889280 Nov 27 09:30 result.tar.gz
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas      8700 Nov 27 09:30 runtime_log.err
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas       666 Nov 27 09:30 a4kNDmmtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SKODmrzKtRn.diag
[2025-11-27 09:30:38] -rw-r--r--. 1 boincer umatlas     21150 Nov 27 09:30 stderr.txt
[2025-11-27 09:30:38] HITS file was successfully produced:
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas 918145757 Nov 27 09:29 shared/HITS.pool.root.1
[2025-11-27 09:30:38]  *** Contents of shared directory: ***
[2025-11-27 09:30:38] total 1315284
[2025-11-27 09:30:38] -rw-r--r--. 2 boincer umatlas 410190027 Nov 26 00:10 ATLAS.root_0
[2025-11-27 09:30:38] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:10 input.tar.gz
[2025-11-27 09:30:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:10 start_atlas.sh
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas 918145757 Nov 27 09:29 HITS.pool.root.1
[2025-11-27 09:30:38] -rw-------. 1 boincer umatlas  17889280 Nov 27 09:30 result.tar.gz
09:30:39 (430501): run_atlas exited; CPU time 219351.097226
09:30:39 (430501): called boinc_finish(0)

</stderr_txt>
]]>

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