Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:45 (2194475): wrapper (7.7.26015): starting
00:02:45 (2194475): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:02:45] Arguments: --nthreads 12
[2025-11-27 00:02:45] Threads: 12
[2025-11-27 00:02:45] Checking for CVMFS
[2025-11-27 00:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:47] 2.13.2.0 9630 34835 190564 153347 3 215 36725538 39288832 8726 16776704 0 24473451 99.597 22828583 31949 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:02:47] CVMFS is ok
[2025-11-27 00:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:48] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:48] Checking for apptainer binary...
[2025-11-27 00:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:48] Running /usr/bin/apptainer --version
[2025-11-27 00:02:49] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:50] c-211-17.aglt2.org
[2025-11-27 00:02:50] apptainer works
[2025-11-27 00:02:50] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:02:50] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:02:50] Starting ATLAS job with PandaID=6891106651
[2025-11-27 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:37:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:37:55] 2025-11-27 17:36:58,232 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:37:55] 2025-11-27 17:36:58,233 | INFO     | sum of square deviations: 125131120871.31523
[2025-11-27 12:37:55] 2025-11-27 17:36:58,245 | INFO     | sum of deviations: 1696847668884.5803
[2025-11-27 12:37:55] 2025-11-27 17:36:58,246 | INFO     | mean x: 1764242449.6129906
[2025-11-27 12:37:55] 2025-11-27 17:36:58,246 | INFO     | mean y: 3572073.460081191
[2025-11-27 12:37:55] 2025-11-27 17:36:58,246 | INFO     | intersect: -23920537829.23705
[2025-11-27 12:37:55] 2025-11-27 17:36:58,247 | INFO     | chi2: 6.893380577668751
[2025-11-27 12:37:55] 2025-11-27 17:36:58,248 | INFO     | sum of square deviations: 122609164366.69228
[2025-11-27 12:37:55] 2025-11-27 17:36:58,245 | INFO     | sufficient remaining disk space (51002736640 B)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,259 | INFO     | sum of deviations: 1972325226498.0037
[2025-11-27 12:37:55] 2025-11-27 17:36:58,260 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,261 | INFO     | mean x: 1764242297.1444142
[2025-11-27 12:37:55] 2025-11-27 17:36:58,261 | INFO     | mean y: 3588718.7452316075
[2025-11-27 12:37:55] 2025-11-27 17:36:58,261 | INFO     | intersect: -28376505104.46976
[2025-11-27 12:37:55] 2025-11-27 17:36:58,262 | INFO     | chi2: 4.212908257679671
[2025-11-27 12:37:55] 2025-11-27 17:36:58,262 | INFO     | current chi2=4.212908257679671 (change=38.88472846940332 %)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,263 | INFO     | sum of square deviations: 120121214104.64464
[2025-11-27 12:37:55] 2025-11-27 17:36:58,274 | INFO     | sum of deviations: 2004142234900.8171
[2025-11-27 12:37:55] 2025-11-27 17:36:58,274 | INFO     | mean x: 1764242144.6721537
[2025-11-27 12:37:55] 2025-11-27 17:36:58,275 | INFO     | mean y: 3590657.1289437586
[2025-11-27 12:37:55] 2025-11-27 17:36:58,275 | INFO     | intersect: -29431611285.21261
[2025-11-27 12:37:55] 2025-11-27 17:36:58,276 | INFO     | chi2: 4.020210332029317
[2025-11-27 12:37:55] 2025-11-27 17:36:58,276 | INFO     | current chi2=4.020210332029317 (change=4.573988177859946 %)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,276 | INFO     | right removable region: 728
[2025-11-27 12:37:55] 2025-11-27 17:36:58,277 | INFO     | sum of square deviations: 122607084876.69226
[2025-11-27 12:37:55] 2025-11-27 17:36:58,289 | INFO     | sum of deviations: 1370080123004.974
[2025-11-27 12:37:55] 2025-11-27 17:36:58,289 | INFO     | mean x: 1764242602.1444142
[2025-11-27 12:37:55] 2025-11-27 17:36:58,289 | INFO     | mean y: 3591808.2738419618
[2025-11-27 12:37:55] 2025-11-27 17:36:58,289 | INFO     | intersect: -19711041516.44472
[2025-11-27 12:37:55] 2025-11-27 17:36:58,290 | INFO     | chi2: 3.615714687556937
[2025-11-27 12:37:55] 2025-11-27 17:36:58,290 | INFO     | current chi2=3.615714687556937 (change=47.54801875773232 %)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,291 | INFO     | sum of square deviations: 120117412721.32782
[2025-11-27 12:37:55] 2025-11-27 17:36:58,303 | INFO     | sum of deviations: 1247366836250.863
[2025-11-27 12:37:55] 2025-11-27 17:36:58,303 | INFO     | mean x: 1764242754.6694102
[2025-11-27 12:37:55] 2025-11-27 17:36:58,303 | INFO     | mean y: 3599316.4019204387
[2025-11-27 12:37:55] 2025-11-27 17:36:58,303 | INFO     | intersect: -18317290664.60368
[2025-11-27 12:37:55] 2025-11-27 17:36:58,304 | INFO     | chi2: 3.2066239436934363
[2025-11-27 12:37:55] 2025-11-27 17:36:58,304 | INFO     | current chi2=3.2066239436934363 (change=11.314242942656369 %)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,304 | INFO     | left removable region: 20
[2025-11-27 12:37:55] 2025-11-27 17:36:58,305 | INFO     | sum of square deviations: 110032513778.62709
[2025-11-27 12:37:55] 2025-11-27 17:36:58,317 | INFO     | sum of deviations: 1413491945085.7532
[2025-11-27 12:37:55] 2025-11-27 17:36:58,317 | INFO     | mean x: 1764242724.279661
[2025-11-27 12:37:55] 2025-11-27 17:36:58,317 | INFO     | mean y: 3627220.642655367
[2025-11-27 12:37:55] 2025-11-27 17:36:58,318 | INFO     | intersect: -22660063667.69398
[2025-11-27 12:37:55] 2025-11-27 17:36:58,319 | INFO     | chi2: 0.1889431236434512
[2025-11-27 12:37:55] 2025-11-27 17:36:58,319 | INFO     | current memory leak: 12.85 B/s (using 708 data points, chi2=0.19)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,320 | INFO     | could have reported an average CPU frequency of 2599 MHz (28 samples)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,320 | INFO     | ..............................
[2025-11-27 12:37:55] 2025-11-27 17:36:58,320 | INFO     | . Timing measurements:
[2025-11-27 12:37:55] 2025-11-27 17:36:58,320 | INFO     | . get job = 0 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | . initial setup = 5 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | . payload setup = 33 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | . stage-in = 0 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | . payload execution = 45104 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | . stage-out = 3 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | . log creation = 0 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,321 | INFO     | ..............................
[2025-11-27 12:37:55] 2025-11-27 17:36:58,429 | INFO     | 
[2025-11-27 12:37:55] 2025-11-27 17:36:58,429 | INFO     | job summary report
[2025-11-27 12:37:55] 2025-11-27 17:36:58,429 | INFO     | --------------------------------------------------
[2025-11-27 12:37:55] 2025-11-27 17:36:58,429 | INFO     | PanDA job id: 6891106651
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | task id: 47483661
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | errors: (none)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | pilot state: finished 
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | transexitcode: 0
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | exeerrorcode: 0
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | exeerrordiag: 
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | exitcode: 0
[2025-11-27 12:37:55] 2025-11-27 17:36:58,430 | INFO     | exitmsg: OK
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | cpuconsumptiontime: 302024 s
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | nevents: 1000
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | neventsw: 0
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | pid: 2205342
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | pgrp: 2205342
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | corecount: 12
[2025-11-27 12:37:55] 2025-11-27 17:36:58,431 | INFO     | event service: False
[2025-11-27 12:37:55] 2025-11-27 17:36:58,432 | INFO     | sizes: {0: 2284304, 12: 2284304, 23: 2284622, 35: 2284622, 45142: 2331287, 45146: 2340281, 45147: 2340465, 45151: 2340711}
[2025-11-27 12:37:55] 2025-11-27 17:36:58,432 | INFO     | --------------------------------------------------
[2025-11-27 12:37:55] 2025-11-27 17:36:58,432 | INFO     | 
[2025-11-27 12:37:55] 2025-11-27 17:36:58,432 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 12:37:55] 2025-11-27 17:36:58,439 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6891106651: 10741707 B (within 2537553920 B limit)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,440 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6891106651/HITS.47483661._002417.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,440 | INFO     | total size of present files: 0 B (workdir size: 10741707 B)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,440 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6891106651/HITS.47483661._002417.pool.root.1 since it does not exist
[2025-11-27 12:37:55] 2025-11-27 17:36:58,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:37:55] 2025-11-27 17:36:58,454 | INFO     | job 6891106651 has completed (purged errors)
[2025-11-27 12:37:55] 2025-11-27 17:36:58,455 | INFO     | overall cleanup function is called
[2025-11-27 12:37:55] 2025-11-27 17:36:58,693 | INFO     | number of running child processes to parent process 2205342: 1
[2025-11-27 12:37:55] 2025-11-27 17:36:58,693 | INFO     | maximum number of monitored processes: 20
[2025-11-27 12:37:55] 2025-11-27 17:36:58,693 | INFO     | aborting job monitoring since job object (job id=6891106651) has expired
[2025-11-27 12:37:55] 2025-11-27 17:36:59,479 | INFO     | --- collectZombieJob: --- 10, [2205342]
[2025-11-27 12:37:55] 2025-11-27 17:36:59,480 | INFO     | zombie collector waiting for pid 2205342
[2025-11-27 12:37:55] 2025-11-27 17:36:59,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:37:55] 2025-11-27 17:36:59,480 | INFO     | collected zombie processes
[2025-11-27 12:37:55] 2025-11-27 17:36:59,480 | INFO     | will attempt to kill all subprocesses of pid=2205342
[2025-11-27 12:37:55] 2025-11-27 17:36:59,651 | INFO     | process IDs to be killed: [2205342] (in reverse order)
[2025-11-27 12:37:55] 2025-11-27 17:36:59,696 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:37:55] 2025-11-27 17:36:59,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:37:55] 2025-11-27 17:36:59,704 | INFO     | did not find any defunct processes belonging to 2205342
[2025-11-27 12:37:55] 2025-11-27 17:36:59,711 | INFO     | did not find any defunct processes belonging to 2205342
[2025-11-27 12:37:55] 2025-11-27 17:36:59,713 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:37:55] 2025-11-27 17:36:59,713 | INFO     | ready for new job
[2025-11-27 12:37:55] 2025-11-27 17:36:59,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:37:55] 2025-11-27 17:36:59,717 | INFO     | ***************************************
[2025-11-27 12:37:55] 2025-11-27 17:36:59,718 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:37:55] 2025-11-27 17:36:59,718 | INFO     | ***************************************
[2025-11-27 12:37:55] 2025-11-27 17:36:59,718 | INFO     | 
[2025-11-27 12:37:55] 2025-11-27 17:36:59,720 | INFO     | architecture information:
[2025-11-27 12:37:55] 2025-11-27 17:36:59,720 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:37:55] 2025-11-27 17:36:59,732 | INFO     | cat /etc/os-release:
[2025-11-27 12:37:55] NAME="CentOS Linux"
[2025-11-27 12:37:55] VERSION="7 (Core)"
[2025-11-27 12:37:55] ID="centos"
[2025-11-27 12:37:55] ID_LIKE="rhel fedora"
[2025-11-27 12:37:55] VERSION_ID="7"
[2025-11-27 12:37:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:37:55] ANSI_COLOR="0;31"
[2025-11-27 12:37:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:37:55] HOME_URL="https://www.centos.org/"
[2025-11-27 12:37:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:37:55] 
[2025-11-27 12:37:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:37:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:37:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:37:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:37:55] 
[2025-11-27 12:37:55] 2025-11-27 17:36:59,732 | INFO     | ***************************************
[2025-11-27 12:37:55] 2025-11-27 17:37:00,234 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 12:37:55] 2025-11-27 17:37:00,255 | INFO     | sufficient remaining disk space (51019513856 B)
[2025-11-27 12:37:55] 2025-11-27 17:37:00,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:37:55] 2025-11-27 17:37:00,256 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:37:55] 2025-11-27 17:37:00,256 | INFO     | update_server=False
[2025-11-27 12:37:55] 2025-11-27 17:37:00,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:37:55] 2025-11-27 17:37:00,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:37:55] 2025-11-27 17:37:00,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:37:55] 2025-11-27 17:37:00,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:37:55] 2025-11-27 17:37:00,257 | INFO     | aborting loop
[2025-11-27 12:37:55] 2025-11-27 17:37:00,766 | INFO     | all data control threads have been joined
[2025-11-27 12:37:55] 2025-11-27 17:37:01,261 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,262 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,263 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,288 | INFO     | [job] validate thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:37:55] 2025-11-27 17:37:01,338 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,344 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,576 | INFO     | all payload control threads have been joined
[2025-11-27 12:37:55] 2025-11-27 17:37:01,623 | INFO     | all job control threads have been joined
[2025-11-27 12:37:55] 2025-11-27 17:37:01,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,772 | INFO     | [data] control thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,887 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:01,967 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:02,108 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:02,385 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:02,581 | INFO     | [payload] control thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:02,628 | INFO     | [job] control thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:03,312 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:04,264 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:37:55] 2025-11-27 17:37:30,689 | INFO     | PID=2198255 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:37:55] 2025-11-27 17:37:30,689 | INFO     | .. there are 7 such processes running
[2025-11-27 12:37:55] 2025-11-27 17:37:30,690 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:37:55] 2025-11-27 17:37:30,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:37:55] 2025-11-27 17:37:30,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:37:55] 2025-11-27 17:37:48,203 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:37:55] 2025-11-27 17:37:49,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562733381440)>', '<ExcThread(monitor, started 140561721845504)>']
[2025-11-27 12:37:55] 2025-11-27 17:37:49,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:37:55] 2025-11-27 17:37:49,780 | INFO     | [monitor] control thread has ended
[2025-11-27 12:37:55] 2025-11-27 17:37:54,750 | INFO     | all workflow threads have been joined
[2025-11-27 12:37:55] 2025-11-27 17:37:54,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:37:55] 2025-11-27 17:37:54,751 | INFO     | traces error code: 0
[2025-11-27 12:37:55] 2025-11-27 17:37:54,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:37:55] 2025-11-27 17:37:54,890 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:37:55] 2025-11-27 17:37:54,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:37:55] 2025-11-27 17:37:54,898 [wrapper] pilotpid: 2198255
[2025-11-27 12:37:55] 2025-11-27 17:37:54,901 [wrapper] Pilot exit status: 0
[2025-11-27 12:37:55] 2025-11-27 17:37:54,913 [wrapper] pandaids: 6891106651
[2025-11-27 12:37:55] 2025-11-27 17:37:54,963 [wrapper] cleanup supervisor_pilot 3289341 2198256
[2025-11-27 12:37:55] 2025-11-27 17:37:54,966 [wrapper] Test setup, not cleaning
[2025-11-27 12:37:55] 2025-11-27 17:37:54,970 [wrapper] apfmon messages muted
[2025-11-27 12:37:55] 2025-11-27 17:37:54,973 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:37:55] 2025-11-27 17:37:54,976 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:37:55]  *** Error codes and diagnostics ***
[2025-11-27 12:37:55]     "exeErrorCode": 0,
[2025-11-27 12:37:55]     "exeErrorDiag": "",
[2025-11-27 12:37:55]     "pilotErrorCode": 0,
[2025-11-27 12:37:55]     "pilotErrorDiag": "",
[2025-11-27 12:37:55]  *** Listing of results directory ***
[2025-11-27 12:37:55] total 1310292
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-27 12:37:55] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:37:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 12:37:55] -rw-r--r--. 2 boincer umatlas 409245525 Nov 27 00:02 EVNT.47483658._000272.pool.root.1
[2025-11-27 12:37:55] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:37:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 12:37:55] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 00:02 input.tar.gz
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 00:02 pandaJob.out
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 12:37:55] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 12:27 init_data.xml
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas       532 Nov 27 12:28 boinc_task_state.xml
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas 911309975 Nov 27 12:36 HITS.47483661._002417.pool.root.1
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas      1055 Nov 27 12:36 memory_monitor_summary.json
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas   2437997 Nov 27 12:36 log.47483661._002417.job.log.tgz.1
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas        95 Nov 27 12:36 pilot_heartbeat.json
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas      8640 Nov 27 12:36 heartbeat.json
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:37 wrapper_checkpoint.txt
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:37 boinc_mmap_file
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas      4823 Nov 27 12:37 pilotlog.txt
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas   6194471 Nov 27 12:37 log.47483661._002417.job.log.1
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas       353 Nov 27 12:37 output.list
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:37 runtime_log
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas   8652800 Nov 27 12:37 result.tar.gz
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas       660 Nov 27 12:37 T4NNDmRtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmRKODmfV9kzn.diag
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas      8706 Nov 27 12:37 runtime_log.err
[2025-11-27 12:37:55] -rw-r--r--. 1 boincer umatlas     21571 Nov 27 12:37 stderr.txt
[2025-11-27 12:37:55] HITS file was successfully produced:
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas 911309975 Nov 27 12:36 shared/HITS.pool.root.1
[2025-11-27 12:37:55]  *** Contents of shared directory: ***
[2025-11-27 12:37:55] total 1298660
[2025-11-27 12:37:55] -rw-r--r--. 2 boincer umatlas 409245525 Nov 27 00:02 ATLAS.root_0
[2025-11-27 12:37:55] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:37:55] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 00:02 input.tar.gz
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas 911309975 Nov 27 12:36 HITS.pool.root.1
[2025-11-27 12:37:55] -rw-------. 1 boincer umatlas   8652800 Nov 27 12:37 result.tar.gz
12:37:56 (2194475): run_atlas exited; CPU time 302257.333143
12:37:56 (2194475): called boinc_finish(0)

</stderr_txt>
]]>

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