Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:31 (3519023): wrapper (7.7.26015): starting
00:05:31 (3519023): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:05:31] Arguments: --nthreads 8
[2025-11-26 00:05:31] Threads: 8
[2025-11-26 00:05:31] Checking for CVMFS
[2025-11-26 00:05:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:05:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:05:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:05:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:05:32] 2.13.3.0 12537 29605 362884 153309 1 223 39612715 40960001 31322 16776704 43 170572254 99.715 129440754 37337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:05:32] CVMFS is ok
[2025-11-26 00:05:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:05:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:05:32] Further information can be found at the LHC@home message board.
[2025-11-26 00:05:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:05:32] Checking for apptainer binary...
[2025-11-26 00:05:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:05:32] Running /usr/bin/apptainer --version
[2025-11-26 00:05:32] apptainer version 1.4.4-1.el9
[2025-11-26 00:05:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:05:32] c7-11-14.aglt2.org
[2025-11-26 00:05:32] apptainer works
[2025-11-26 00:05:32] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:05:32] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:05:32] Starting ATLAS job with PandaID=6891107042
[2025-11-26 00:05:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:22:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:22:01] 2025-11-27 01:21:19,594 | INFO     | time since job start (72931s) is within the limit (172800.0s)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,635 | INFO     | sum of deviations: 2964295411595.541
[2025-11-26 20:22:01] 2025-11-27 01:21:19,636 | INFO     | mean x: 1764169999.591632
[2025-11-26 20:22:01] 2025-11-27 01:21:19,636 | INFO     | mean y: 2875238.953974895
[2025-11-26 20:22:01] 2025-11-27 01:21:19,636 | INFO     | intersect: -9879908825.965132
[2025-11-26 20:22:01] 2025-11-27 01:21:19,637 | INFO     | chi2: 9.057646157387634
[2025-11-26 20:22:01] 2025-11-27 01:21:19,638 | INFO     | sum of square deviations: 522540507449.4591
[2025-11-26 20:22:01] 2025-11-27 01:21:19,662 | INFO     | sum of deviations: 3379526194106.8135
[2025-11-26 20:22:01] 2025-11-27 01:21:19,662 | INFO     | mean x: 1764169847.0941176
[2025-11-26 20:22:01] 2025-11-27 01:21:19,662 | INFO     | mean y: 2884815.1445378154
[2025-11-26 20:22:01] 2025-11-27 01:21:19,662 | INFO     | intersect: -11406868350.612936
[2025-11-26 20:22:01] 2025-11-27 01:21:19,663 | INFO     | chi2: 5.645802633012518
[2025-11-26 20:22:01] 2025-11-27 01:21:19,663 | INFO     | current chi2=5.645802633012518 (change=37.668103446416204 %)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,664 | INFO     | sum of square deviations: 515981725685.1842
[2025-11-26 20:22:01] 2025-11-27 01:21:19,690 | INFO     | sum of deviations: 3734929487278.0864
[2025-11-26 20:22:01] 2025-11-27 01:21:19,691 | INFO     | mean x: 1764169694.5966244
[2025-11-26 20:22:01] 2025-11-27 01:21:19,691 | INFO     | mean y: 2893071.9206751054
[2025-11-26 20:22:01] 2025-11-27 01:21:19,691 | INFO     | intersect: -12767034785.817999
[2025-11-26 20:22:01] 2025-11-27 01:21:19,692 | INFO     | chi2: 2.846665304976196
[2025-11-26 20:22:01] 2025-11-27 01:21:19,692 | INFO     | current chi2=2.846665304976196 (change=49.57908573829729 %)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,692 | INFO     | sum of square deviations: 509477917029.79236
[2025-11-26 20:22:01] 2025-11-27 01:21:19,707 | INFO     | sum of deviations: 3748644796969.8438
[2025-11-26 20:22:01] 2025-11-27 01:21:19,708 | INFO     | mean x: 1764169542.0974576
[2025-11-26 20:22:01] 2025-11-27 01:21:19,708 | INFO     | mean y: 2893390.7491525426
[2025-11-26 20:22:01] 2025-11-27 01:21:19,708 | INFO     | intersect: -12977541587.690922
[2025-11-26 20:22:01] 2025-11-27 01:21:19,709 | INFO     | chi2: 2.7489867168854025
[2025-11-26 20:22:01] 2025-11-27 01:21:19,709 | INFO     | current chi2=2.7489867168854025 (change=3.431333775700419 %)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,709 | INFO     | right removable region: 1179
[2025-11-26 20:22:01] 2025-11-27 01:21:19,710 | INFO     | sum of square deviations: 522540221603.8322
[2025-11-26 20:22:01] 2025-11-27 01:21:19,731 | INFO     | sum of deviations: 2616755703073.3037
[2025-11-26 20:22:01] 2025-11-27 01:21:19,731 | INFO     | mean x: 1764170152.092437
[2025-11-26 20:22:01] 2025-11-27 01:21:19,732 | INFO     | mean y: 2883245.1336134453
[2025-11-26 20:22:01] 2025-11-27 01:21:19,732 | INFO     | intersect: -8831656405.250547
[2025-11-26 20:22:01] 2025-11-27 01:21:19,732 | INFO     | chi2: 6.636092158624635
[2025-11-26 20:22:01] 2025-11-27 01:21:19,733 | INFO     | current chi2=6.636092158624635 (change=26.734914973333566 %)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,734 | INFO     | sum of square deviations: 515981734577.3834
[2025-11-26 20:22:01] 2025-11-27 01:21:19,757 | INFO     | sum of deviations: 2512118706740.6284
[2025-11-26 20:22:01] 2025-11-27 01:21:19,758 | INFO     | mean x: 1764170304.5864978
[2025-11-26 20:22:01] 2025-11-27 01:21:19,758 | INFO     | mean y: 2885677.676793249
[2025-11-26 20:22:01] 2025-11-27 01:21:19,758 | INFO     | intersect: -8586188173.276358
[2025-11-26 20:22:01] 2025-11-27 01:21:19,759 | INFO     | chi2: 6.541794901997871
[2025-11-26 20:22:01] 2025-11-27 01:21:19,759 | INFO     | current chi2=6.541794901997871 (change=1.420975694320482 %)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,759 | INFO     | left removable region: 20
[2025-11-26 20:22:01] 2025-11-27 01:21:19,760 | INFO     | sum of square deviations: 482758946614.68506
[2025-11-26 20:22:01] 2025-11-27 01:21:19,783 | INFO     | sum of deviations: 3127383516955.421
[2025-11-26 20:22:01] 2025-11-27 01:21:19,783 | INFO     | mean x: 1764170121.5884383
[2025-11-26 20:22:01] 2025-11-27 01:21:19,783 | INFO     | mean y: 2907805.46419327
[2025-11-26 20:22:01] 2025-11-27 01:21:19,784 | INFO     | intersect: -11425645923.162022
[2025-11-26 20:22:01] 2025-11-27 01:21:19,784 | INFO     | chi2: 0.12835374383872364
[2025-11-26 20:22:01] 2025-11-27 01:21:19,785 | INFO     | current memory leak: 6.48 B/s (using 1159 data points, chi2=0.13)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,785 | INFO     | could have reported an average CPU frequency of 3290 MHz (44 samples)
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | ..............................
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . Timing measurements:
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . get job = 0 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . initial setup = 2 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . payload setup = 9 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . stage-in = 0 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . payload execution = 72885 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . stage-out = 3 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | . log creation = 1 s
[2025-11-26 20:22:01] 2025-11-27 01:21:19,786 | INFO     | ..............................
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | 
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | job summary report
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | --------------------------------------------------
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | PanDA job id: 6891107042
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | task id: 47483661
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | errors: (none)
[2025-11-26 20:22:01] 2025-11-27 01:21:20,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | pilot state: finished 
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | transexitcode: 0
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | exeerrorcode: 0
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | exeerrordiag: 
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | exitcode: 0
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | exitmsg: OK
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | cpuconsumptiontime: 200980 s
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | nevents: 1000
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | neventsw: 0
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | pid: 3547903
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | pgrp: 3547903
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | corecount: 8
[2025-11-26 20:22:01] 2025-11-27 01:21:20,099 | INFO     | event service: False
[2025-11-26 20:22:01] 2025-11-27 01:21:20,100 | INFO     | sizes: {0: 2284077, 1: 2284332, 7: 2284594, 12: 2284622, 72898: 2344291, 72899: 2344290, 72903: 2353468, 72905: 2353524, 72914: 2353770}
[2025-11-26 20:22:01] 2025-11-27 01:21:20,100 | INFO     | --------------------------------------------------
[2025-11-26 20:22:01] 2025-11-27 01:21:20,100 | INFO     | 
[2025-11-26 20:22:01] 2025-11-27 01:21:20,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:22:01] 2025-11-27 01:21:20,222 | INFO     | job 6891107042 has completed (purged errors)
[2025-11-26 20:22:01] 2025-11-27 01:21:20,222 | INFO     | overall cleanup function is called
[2025-11-26 20:22:01] 2025-11-27 01:21:21,241 | INFO     | --- collectZombieJob: --- 10, [3547903]
[2025-11-26 20:22:01] 2025-11-27 01:21:21,241 | INFO     | zombie collector waiting for pid 3547903
[2025-11-26 20:22:01] 2025-11-27 01:21:21,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:22:01] 2025-11-27 01:21:21,241 | INFO     | collected zombie processes
[2025-11-26 20:22:01] 2025-11-27 01:21:21,241 | INFO     | will attempt to kill all subprocesses of pid=3547903
[2025-11-26 20:22:01] 2025-11-27 01:21:21,904 | INFO     | process IDs to be killed: [3547903] (in reverse order)
[2025-11-26 20:22:01] 2025-11-27 01:21:22,161 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:22:01] 2025-11-27 01:21:22,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:22:01] 2025-11-27 01:21:22,222 | INFO     | did not find any defunct processes belonging to 3547903
[2025-11-26 20:22:01] 2025-11-27 01:21:22,248 | INFO     | did not find any defunct processes belonging to 3547903
[2025-11-26 20:22:01] 2025-11-27 01:21:22,249 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:22:01] 2025-11-27 01:21:22,250 | INFO     | ready for new job
[2025-11-26 20:22:01] 2025-11-27 01:21:22,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:22:01] 2025-11-27 01:21:22,261 | INFO     | ***************************************
[2025-11-26 20:22:01] 2025-11-27 01:21:22,261 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:22:01] 2025-11-27 01:21:22,261 | INFO     | ***************************************
[2025-11-26 20:22:01] 2025-11-27 01:21:22,261 | INFO     | 
[2025-11-26 20:22:01] 2025-11-27 01:21:22,270 | INFO     | architecture information:
[2025-11-26 20:22:01] 2025-11-27 01:21:22,273 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:22:01] 2025-11-27 01:21:22,295 | INFO     | cat /etc/os-release:
[2025-11-26 20:22:01] NAME="CentOS Linux"
[2025-11-26 20:22:01] VERSION="7 (Core)"
[2025-11-26 20:22:01] ID="centos"
[2025-11-26 20:22:01] ID_LIKE="rhel fedora"
[2025-11-26 20:22:01] VERSION_ID="7"
[2025-11-26 20:22:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:22:01] ANSI_COLOR="0;31"
[2025-11-26 20:22:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:22:01] HOME_URL="https://www.centos.org/"
[2025-11-26 20:22:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:22:01] 
[2025-11-26 20:22:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:22:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:22:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:22:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:22:01] 
[2025-11-26 20:22:01] 2025-11-27 01:21:22,296 | INFO     | ***************************************
[2025-11-26 20:22:01] 2025-11-27 01:21:22,798 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 20:22:01] 2025-11-27 01:21:22,825 | INFO     | sufficient remaining disk space (77150027776 B)
[2025-11-26 20:22:01] 2025-11-27 01:21:22,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:22:01] 2025-11-27 01:21:22,825 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:22:01] 2025-11-27 01:21:22,825 | INFO     | update_server=False
[2025-11-26 20:22:01] 2025-11-27 01:21:22,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:22:01] 2025-11-27 01:21:22,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:22:01] 2025-11-27 01:21:23,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 20:22:01] 2025-11-27 01:21:23,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 20:22:01] 2025-11-27 01:21:23,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:22:01] 2025-11-27 01:21:23,013 | INFO     | will abort loop
[2025-11-26 20:22:01] 2025-11-27 01:21:23,390 | INFO     | all payload control threads have been joined
[2025-11-26 20:22:01] 2025-11-27 01:21:23,578 | INFO     | all data control threads have been joined
[2025-11-26 20:22:01] 2025-11-27 01:21:23,830 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,018 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,269 | INFO     | all job control threads have been joined
[2025-11-26 20:22:01] 2025-11-27 01:21:24,400 | INFO     | [payload] control thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,450 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,584 | INFO     | [data] control thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,645 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,715 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,835 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:22:01] 2025-11-27 01:21:24,943 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:24,996 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:25,132 | INFO     | [job] validate thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:25,147 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:25,279 | INFO     | [job] control thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:25,891 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:26,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:22:01] 2025-11-27 01:21:30,214 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:33,122 | INFO     | job.realtimelogging is not enabled
[2025-11-26 20:22:01] 2025-11-27 01:21:34,128 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:22:01] 2025-11-27 01:21:54,200 | INFO     | PID=3529625 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:22:01] 2025-11-27 01:21:54,201 | INFO     | .. there are 54 such processes running
[2025-11-26 20:22:01] 2025-11-27 01:21:54,235 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:22:01] 2025-11-27 01:21:54,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:22:01] 2025-11-27 01:21:54,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:22:01] 2025-11-27 01:21:54,990 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:22:01] 2025-11-27 01:21:55,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566077130560)>', '<ExcThread(monitor, started 140565203113728)>']
[2025-11-26 20:22:01] 2025-11-27 01:21:55,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:22:01] 2025-11-27 01:21:55,241 | INFO     | [monitor] control thread has ended
[2025-11-26 20:22:01] 2025-11-27 01:22:00,231 | INFO     | all workflow threads have been joined
[2025-11-26 20:22:01] 2025-11-27 01:22:00,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:22:01] 2025-11-27 01:22:00,231 | INFO     | traces error code: 0
[2025-11-26 20:22:01] 2025-11-27 01:22:00,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:22:01] 2025-11-27 01:22:00,652 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:22:01] 2025-11-27 01:22:00,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:22:01] 2025-11-27 01:22:00,661 [wrapper] pilotpid: 3529625
[2025-11-26 20:22:01] 2025-11-27 01:22:00,665 [wrapper] Pilot exit status: 0
[2025-11-26 20:22:01] 2025-11-27 01:22:00,712 [wrapper] pandaids: 6891107042
[2025-11-26 20:22:01] 2025-11-27 01:22:00,870 [wrapper] cleanup supervisor_pilot 2814540 3529626
[2025-11-26 20:22:01] 2025-11-27 01:22:00,882 [wrapper] Test setup, not cleaning
[2025-11-26 20:22:01] 2025-11-27 01:22:00,932 [wrapper] apfmon messages muted
[2025-11-26 20:22:01] 2025-11-27 01:22:00,969 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:22:01] 2025-11-27 01:22:01,002 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:22:01]  *** Error codes and diagnostics ***
[2025-11-26 20:22:01]     "exeErrorCode": 0,
[2025-11-26 20:22:01]     "exeErrorDiag": "",
[2025-11-26 20:22:01]     "pilotErrorCode": 0,
[2025-11-26 20:22:01]     "pilotErrorDiag": "",
[2025-11-26 20:22:01]  *** Listing of results directory ***
[2025-11-26 20:22:01] total 1324056
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-26 20:22:01] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:22:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:05 run_atlas
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:05 job.xml
[2025-11-26 20:22:01] -rw-r--r--. 2 boincer umatlas 410161884 Nov 26 00:05 EVNT.47483658._000288.pool.root.1
[2025-11-26 20:22:01] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-26 20:22:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:05 shared
[2025-11-26 20:22:01] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:05 input.tar.gz
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:05 boinc_lockfile
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:05 pandaJob.out
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 20:22:01] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas       532 Nov 26 20:07 boinc_task_state.xml
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas      6905 Nov 26 20:20 init_data.xml
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas 918099449 Nov 26 20:20 HITS.47483661._002574.pool.root.1
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas      1059 Nov 26 20:21 memory_monitor_summary.json
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas   2317762 Nov 26 20:21 log.47483661._002574.job.log.tgz.1
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas      8610 Nov 26 20:21 heartbeat.json
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas        95 Nov 26 20:21 pilot_heartbeat.json
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas      5082 Nov 26 20:22 pilotlog.txt
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:22 wrapper_checkpoint.txt
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:22 boinc_mmap_file
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas   9507164 Nov 26 20:22 log.47483661._002574.job.log.1
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas       353 Nov 26 20:22 output.list
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:22 runtime_log
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas  11847680 Nov 26 20:22 result.tar.gz
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas      8704 Nov 26 20:22 runtime_log.err
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas       664 Nov 26 20:22 oHDODmmtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRTKODmbpJ1Lo.diag
[2025-11-26 20:22:01] -rw-r--r--. 1 boincer umatlas     21202 Nov 26 20:22 stderr.txt
[2025-11-26 20:22:01] HITS file was successfully produced:
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas 918099449 Nov 26 20:20 shared/HITS.pool.root.1
[2025-11-26 20:22:01]  *** Contents of shared directory: ***
[2025-11-26 20:22:01] total 1309308
[2025-11-26 20:22:01] -rw-r--r--. 2 boincer umatlas 410161884 Nov 26 00:05 ATLAS.root_0
[2025-11-26 20:22:01] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-26 20:22:01] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:05 input.tar.gz
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas 918099449 Nov 26 20:20 HITS.pool.root.1
[2025-11-26 20:22:01] -rw-------. 1 boincer umatlas  11847680 Nov 26 20:22 result.tar.gz
20:22:43 (3519023): run_atlas exited; CPU time 201701.760867
20:22:43 (3519023): called boinc_finish(0)

</stderr_txt>
]]>

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