Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:43 (335771): wrapper (7.7.26015): starting
00:04:43 (335771): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 00:04:43] Arguments: --nthreads 12
[2025-11-26 00:04:43] Threads: 12
[2025-11-26 00:04:43] Checking for CVMFS
[2025-11-26 00:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:45] 2.13.2.0 6892 36271 169264 153309 2 312 27095125 40960000 18097 16776704 0 96754266 99.745 58299138 35543 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:45] CVMFS is ok
[2025-11-26 00:04:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:45] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:45] Checking for apptainer binary...
[2025-11-26 00:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:45] Running /usr/bin/apptainer --version
[2025-11-26 00:04:45] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:45] c-212-5.aglt2.org
[2025-11-26 00:04:45] apptainer works
[2025-11-26 00:04:45] Set ATHENA_PROC_NUMBER=12
[2025-11-26 00:04:45] Set ATHENA_CORE_NUMBER=12
[2025-11-26 00:04:45] Starting ATLAS job with PandaID=6891104779
[2025-11-26 00:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:57:23]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:57:23] 2025-11-27 07:56:24,542 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:57:23] 2025-11-27 07:56:24,570 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2957.5178854166684
[2025-11-27 02:57:23] 2025-11-27 07:56:24,603 | INFO     | PID=343457 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:57:23] 2025-11-27 07:56:24,603 | INFO     | .. there are 20 such processes running
[2025-11-27 02:57:23] 2025-11-27 07:56:24,675 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6891104779/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:57:23] 2025-11-27 07:56:24,676 | INFO     | extracted standard info from prmon json
[2025-11-27 02:57:23] 2025-11-27 07:56:24,676 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:57:23] 2025-11-27 07:56:24,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:57:23] 2025-11-27 07:56:24,825 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:57:23] 2025-11-27 07:56:24,826 | INFO     | sum of square deviations: 1229985593801.642
[2025-11-27 02:57:23] 2025-11-27 07:56:24,910 | INFO     | sum of deviations: 8900432640373.809
[2025-11-27 02:57:23] 2025-11-27 07:56:24,910 | INFO     | mean x: 1764181851.4200885
[2025-11-27 02:57:23] 2025-11-27 07:56:24,914 | INFO     | mean y: 3537696.7416298166
[2025-11-27 02:57:23] 2025-11-27 07:56:24,915 | INFO     | intersect: -12762450631.140108
[2025-11-27 02:57:23] 2025-11-27 07:56:24,916 | INFO     | chi2: 8.04822932227327
[2025-11-27 02:57:23] 2025-11-27 07:56:24,917 | INFO     | sum of square deviations: 1218368506235.47
[2025-11-27 02:57:23] 2025-11-27 07:56:25,017 | INFO     | sum of deviations: 9584482742877.723
[2025-11-27 02:57:23] 2025-11-27 07:56:25,017 | INFO     | mean x: 1764181698.9309251
[2025-11-27 02:57:23] 2025-11-27 07:56:25,017 | INFO     | mean y: 3546674.7313054497
[2025-11-27 02:57:23] 2025-11-27 07:56:25,017 | INFO     | intersect: -13874659272.128792
[2025-11-27 02:57:23] 2025-11-27 07:56:25,020 | INFO     | chi2: 4.606835508415827
[2025-11-27 02:57:23] 2025-11-27 07:56:25,020 | INFO     | current chi2=4.606835508415827 (change=42.7596391212844 %)
[2025-11-27 02:57:23] 2025-11-27 07:56:25,021 | INFO     | sum of square deviations: 1206823178809.765
[2025-11-27 02:57:23] 2025-11-27 07:56:25,219 | INFO     | sum of deviations: 9751179705001.88
[2025-11-27 02:57:23] 2025-11-27 07:56:25,220 | INFO     | mean x: 1764181546.4310236
[2025-11-27 02:57:23] 2025-11-27 07:56:25,220 | INFO     | mean y: 3548874.9205340114
[2025-11-27 02:57:23] 2025-11-27 07:56:25,220 | INFO     | intersect: -14251108802.820976
[2025-11-27 02:57:23] 2025-11-27 07:56:25,222 | INFO     | chi2: 4.203386683055432
[2025-11-27 02:57:23] 2025-11-27 07:56:25,222 | INFO     | current chi2=4.203386683055432 (change=8.757612999712485 %)
[2025-11-27 02:57:23] 2025-11-27 07:56:25,222 | INFO     | right removable region: 1572
[2025-11-27 02:57:23] 2025-11-27 07:56:25,231 | INFO     | sum of square deviations: 1218365203695.4712
[2025-11-27 02:57:23] 2025-11-27 07:56:25,580 | INFO     | sum of deviations: 8224885765331.416
[2025-11-27 02:57:23] 2025-11-27 07:56:25,580 | INFO     | mean x: 1764182003.9309251
[2025-11-27 02:57:23] 2025-11-27 07:56:25,581 | INFO     | mean y: 3546561.0773130544
[2025-11-27 02:57:23] 2025-11-27 07:56:25,581 | INFO     | intersect: -11906015044.567595
[2025-11-27 02:57:23] 2025-11-27 07:56:25,582 | INFO     | chi2: 5.023409162880588
[2025-11-27 02:57:23] 2025-11-27 07:56:25,582 | INFO     | current chi2=5.023409162880588 (change=37.58367261009287 %)
[2025-11-27 02:57:23] 2025-11-27 07:56:25,604 | INFO     | sum of square deviations: 1206819174142.6992
[2025-11-27 02:57:23] 2025-11-27 07:56:25,634 | INFO     | time since job start (96660s) is within the limit (172800.0s)
[2025-11-27 02:57:23] 2025-11-27 07:56:25,947 | INFO     | sum of deviations: 7993765041891.976
[2025-11-27 02:57:23] 2025-11-27 07:56:25,947 | INFO     | mean x: 1764182156.4354737
[2025-11-27 02:57:23] 2025-11-27 07:56:25,947 | INFO     | mean y: 3549613.6350921807
[2025-11-27 02:57:23] 2025-11-27 07:56:25,947 | INFO     | intersect: -11682093067.391748
[2025-11-27 02:57:23] 2025-11-27 07:56:25,968 | INFO     | chi2: 4.836349817869508
[2025-11-27 02:57:23] 2025-11-27 07:56:25,969 | INFO     | current chi2=4.836349817869508 (change=3.723752912530299 %)
[2025-11-27 02:57:23] 2025-11-27 07:56:25,969 | INFO     | left removable region: 20
[2025-11-27 02:57:23] 2025-11-27 07:56:25,992 | INFO     | sum of square deviations: 1159130928151.2522
[2025-11-27 02:57:23] 2025-11-27 07:56:26,086 | INFO     | sum of deviations: 8437754935540.785
[2025-11-27 02:57:23] 2025-11-27 07:56:26,086 | INFO     | mean x: 1764182125.9207475
[2025-11-27 02:57:23] 2025-11-27 07:56:26,086 | INFO     | mean y: 3566355.0470360825
[2025-11-27 02:57:23] 2025-11-27 07:56:26,086 | INFO     | intersect: -12838586398.069925
[2025-11-27 02:57:23] 2025-11-27 07:56:26,087 | INFO     | chi2: 0.727818852811579
[2025-11-27 02:57:23] 2025-11-27 07:56:26,088 | INFO     | current memory leak: 7.28 B/s (using 1552 data points, chi2=0.73)
[2025-11-27 02:57:23] 2025-11-27 07:56:26,089 | INFO     | could have reported an average CPU frequency of 3019 MHz (56 samples)
[2025-11-27 02:57:23] 2025-11-27 07:56:26,089 | INFO     | ..............................
[2025-11-27 02:57:23] 2025-11-27 07:56:26,089 | INFO     | . Timing measurements:
[2025-11-27 02:57:23] 2025-11-27 07:56:26,089 | INFO     | . get job = 0 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,089 | INFO     | . initial setup = 3 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,090 | INFO     | . payload setup = 30 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,090 | INFO     | . stage-in = 0 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,090 | INFO     | . payload execution = 96578 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,090 | INFO     | . stage-out = 9 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,090 | INFO     | . log creation = 1 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,090 | INFO     | ..............................
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | 
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | job summary report
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | --------------------------------------------------
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | PanDA job id: 6891104779
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | task id: 47483661
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | errors: (none)
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | pilot state: finished 
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | transexitcode: 0
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | exeerrorcode: 0
[2025-11-27 02:57:23] 2025-11-27 07:56:26,657 | INFO     | exeerrordiag: 
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | exitcode: 0
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | exitmsg: OK
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | cpuconsumptiontime: 225046 s
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | nevents: 1000
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | neventsw: 0
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | pid: 370724
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | pgrp: 370724
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | corecount: 12
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | event service: False
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | sizes: {0: 2283476, 1: 2284161, 2: 2284360, 11: 2284622, 13: 2284650, 96613: 2353339, 96624: 2362333, 96628: 2362389, 96637: 2362635}
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | --------------------------------------------------
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | 
[2025-11-27 02:57:23] 2025-11-27 07:56:26,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:57:23] 2025-11-27 07:56:26,706 | INFO     | job 6891104779 has completed (purged errors)
[2025-11-27 02:57:23] 2025-11-27 07:56:26,707 | INFO     | overall cleanup function is called
[2025-11-27 02:57:23] 2025-11-27 07:56:27,807 | INFO     | --- collectZombieJob: --- 10, [370724]
[2025-11-27 02:57:23] 2025-11-27 07:56:27,807 | INFO     | zombie collector waiting for pid 370724
[2025-11-27 02:57:23] 2025-11-27 07:56:27,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:57:23] 2025-11-27 07:56:27,807 | INFO     | collected zombie processes
[2025-11-27 02:57:23] 2025-11-27 07:56:27,807 | INFO     | will attempt to kill all subprocesses of pid=370724
[2025-11-27 02:57:23] 2025-11-27 07:56:29,879 | INFO     | process IDs to be killed: [370724] (in reverse order)
[2025-11-27 02:57:23] 2025-11-27 07:56:30,024 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:57:23] 2025-11-27 07:56:30,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:57:23] 2025-11-27 07:56:30,165 | INFO     | did not find any defunct processes belonging to 370724
[2025-11-27 02:57:23] 2025-11-27 07:56:30,181 | INFO     | did not find any defunct processes belonging to 370724
[2025-11-27 02:57:23] 2025-11-27 07:56:30,183 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:57:23] 2025-11-27 07:56:30,183 | INFO     | ready for new job
[2025-11-27 02:57:23] 2025-11-27 07:56:30,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:57:23] 2025-11-27 07:56:30,216 | INFO     | ***************************************
[2025-11-27 02:57:23] 2025-11-27 07:56:30,217 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:57:23] 2025-11-27 07:56:30,217 | INFO     | ***************************************
[2025-11-27 02:57:23] 2025-11-27 07:56:30,217 | INFO     | 
[2025-11-27 02:57:23] 2025-11-27 07:56:30,244 | INFO     | architecture information:
[2025-11-27 02:57:23] 2025-11-27 07:56:30,267 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:57:23] 2025-11-27 07:56:30,304 | INFO     | cat /etc/os-release:
[2025-11-27 02:57:23] NAME="CentOS Linux"
[2025-11-27 02:57:23] VERSION="7 (Core)"
[2025-11-27 02:57:23] ID="centos"
[2025-11-27 02:57:23] ID_LIKE="rhel fedora"
[2025-11-27 02:57:23] VERSION_ID="7"
[2025-11-27 02:57:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:57:23] ANSI_COLOR="0;31"
[2025-11-27 02:57:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:57:23] HOME_URL="https://www.centos.org/"
[2025-11-27 02:57:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:57:23] 
[2025-11-27 02:57:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:57:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:57:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:57:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:57:23] 
[2025-11-27 02:57:23] 2025-11-27 07:56:30,304 | INFO     | ***************************************
[2025-11-27 02:57:23] 2025-11-27 07:56:30,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 02:57:23] 2025-11-27 07:56:30,855 | INFO     | sufficient remaining disk space (121477529600 B)
[2025-11-27 02:57:23] 2025-11-27 07:56:30,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:57:23] 2025-11-27 07:56:30,856 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:57:23] 2025-11-27 07:56:30,856 | INFO     | update_server=False
[2025-11-27 02:57:23] 2025-11-27 07:56:30,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:57:23] 2025-11-27 07:56:30,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:57:23] 2025-11-27 07:56:30,857 | INFO     | aborting loop
[2025-11-27 02:57:23] 2025-11-27 07:56:30,866 | INFO     | all payload control threads have been joined
[2025-11-27 02:57:23] 2025-11-27 07:56:31,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:57:23] 2025-11-27 07:56:31,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:57:23] 2025-11-27 07:56:31,577 | INFO     | all job control threads have been joined
[2025-11-27 02:57:23] 2025-11-27 07:56:31,771 | INFO     | all data control threads have been joined
[2025-11-27 02:57:23] 2025-11-27 07:56:31,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:57:23] 2025-11-27 07:56:31,861 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:31,863 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:31,873 | INFO     | [payload] control thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,167 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,251 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,400 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,580 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,584 | INFO     | [job] control thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,778 | INFO     | [data] control thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,845 | INFO     | [job] validate thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:32,959 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:33,236 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:33,263 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:33,267 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:35,841 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:57:23] 2025-11-27 07:56:59,253 | INFO     | PID=343457 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 02:57:23] 2025-11-27 07:56:59,253 | INFO     | .. there are 20 such processes running
[2025-11-27 02:57:23] 2025-11-27 07:56:59,253 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:57:23] 2025-11-27 07:56:59,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:57:23] 2025-11-27 07:56:59,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:57:23] 2025-11-27 07:57:15,399 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:57:23] 2025-11-27 07:57:17,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679484340032)>', '<ExcThread(monitor, started 140678625486592)>']
[2025-11-27 02:57:23] 2025-11-27 07:57:17,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:57:23] 2025-11-27 07:57:17,350 | INFO     | [monitor] control thread has ended
[2025-11-27 02:57:23] 2025-11-27 07:57:22,255 | INFO     | all workflow threads have been joined
[2025-11-27 02:57:23] 2025-11-27 07:57:22,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:57:23] 2025-11-27 07:57:22,255 | INFO     | traces error code: 0
[2025-11-27 02:57:23] 2025-11-27 07:57:22,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:57:23] 2025-11-27 07:57:22,460 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:57:23] 2025-11-27 07:57:22,484 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:57:23] 2025-11-27 07:57:22,516 [wrapper] pilotpid: 343457
[2025-11-27 02:57:23] 2025-11-27 07:57:22,535 [wrapper] Pilot exit status: 0
[2025-11-27 02:57:23] 2025-11-27 07:57:22,625 [wrapper] pandaids: 6891104779
[2025-11-27 02:57:23] 2025-11-27 07:57:22,768 [wrapper] cleanup supervisor_pilot  194337 343458
[2025-11-27 02:57:23] 2025-11-27 07:57:22,777 [wrapper] Test setup, not cleaning
[2025-11-27 02:57:23] 2025-11-27 07:57:22,781 [wrapper] apfmon messages muted
[2025-11-27 02:57:23] 2025-11-27 07:57:22,783 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:57:23] 2025-11-27 07:57:22,792 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:57:23]  *** Error codes and diagnostics ***
[2025-11-27 02:57:23]     "exeErrorCode": 0,
[2025-11-27 02:57:23]     "exeErrorDiag": "",
[2025-11-27 02:57:23]     "pilotErrorCode": 0,
[2025-11-27 02:57:23]     "pilotErrorDiag": "",
[2025-11-27 02:57:23]  *** Listing of results directory ***
[2025-11-27 02:57:23] total 1344224
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:57 queuedata.json
[2025-11-27 02:57:23] -rwx------. 1 boincer umatlas     36292 Nov 18 01:58 runpilot2-wrapper.sh
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:57:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 02:57:23] -rw-r--r--. 2 boincer umatlas 409925726 Nov 26 00:04 EVNT.47483658._000227.pool.root.1
[2025-11-27 02:57:23] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 02:57:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 02:57:23] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:04 input.tar.gz
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 02:57:23] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:42 boinc_task_state.xml
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas 932223198 Nov 27 02:54 HITS.47483661._001962.pool.root.1
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 02:55 init_data.xml
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas      1074 Nov 27 02:55 memory_monitor_summary.json
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas   2991730 Nov 27 02:56 log.47483661._001962.job.log.tgz.1
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas        95 Nov 27 02:56 pilot_heartbeat.json
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas      7946 Nov 27 02:56 heartbeat.json
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:57 wrapper_checkpoint.txt
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas      4824 Nov 27 02:57 pilotlog.txt
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:57 boinc_mmap_file
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas  12220617 Nov 27 02:57 log.47483661._001962.job.log.1
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas       353 Nov 27 02:57 output.list
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:57 runtime_log
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas  15226880 Nov 27 02:57 result.tar.gz
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas      8701 Nov 27 02:57 runtime_log.err
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas       666 Nov 27 02:57 AzIODmRqUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDm86qMDmiHtrQo.diag
[2025-11-27 02:57:23] -rw-r--r--. 1 boincer umatlas     21408 Nov 27 02:57 stderr.txt
[2025-11-27 02:57:23] HITS file was successfully produced:
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas 932223198 Nov 27 02:54 shared/HITS.pool.root.1
[2025-11-27 02:57:23]  *** Contents of shared directory: ***
[2025-11-27 02:57:23] total 1326172
[2025-11-27 02:57:23] -rw-r--r--. 2 boincer umatlas 409925726 Nov 26 00:04 ATLAS.root_0
[2025-11-27 02:57:23] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 02:57:23] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:04 input.tar.gz
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas 932223198 Nov 27 02:54 HITS.pool.root.1
[2025-11-27 02:57:23] -rw-------. 1 boincer umatlas  15226880 Nov 27 02:57 result.tar.gz
02:57:24 (335771): run_atlas exited; CPU time 224608.317370
02:57:24 (335771): called boinc_finish(0)

</stderr_txt>
]]>

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