Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:49 (3548132): wrapper (7.7.26015): starting
00:19:49 (3548132): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:19:49] Arguments: --nthreads 9
[2025-11-26 00:19:49] Threads: 9
[2025-11-26 00:19:49] Checking for CVMFS
[2025-11-26 00:19:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:19:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:19:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:19:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:19:51] 2.13.2.0 12166 35413 277756 153311 2 67 33894104 40960000 22489 16776704 0 65351943 99.728 39437975 33641 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:19:51] CVMFS is ok
[2025-11-26 00:19:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:19:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:19:51] Further information can be found at the LHC@home message board.
[2025-11-26 00:19:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:19:51] Checking for apptainer binary...
[2025-11-26 00:19:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:19:51] Running /usr/bin/apptainer --version
[2025-11-26 00:19:51] apptainer version 1.4.4-1.el9
[2025-11-26 00:19:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:19:52] c-211-33-1.aglt2.org
[2025-11-26 00:19:52] apptainer works
[2025-11-26 00:19:52] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:19:52] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:19:53] Starting ATLAS job with PandaID=6891106900
[2025-11-26 00:19:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:31:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:31:12] 2025-11-27 16:29:59,200 | INFO     | monitor loop #7268: job 0:6891106900 is in state 'finished'
[2025-11-27 11:31:12] 2025-11-27 16:29:59,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:31:12] 2025-11-27 16:30:01,136 | INFO     | time since job start (126529s) is within the limit (172800.0s)
[2025-11-27 11:31:12] 2025-11-27 16:30:01,708 | INFO     | monitor loop #7269: job 0:6891106900 is in state 'finished'
[2025-11-27 11:31:12] 2025-11-27 16:30:01,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:31:12] 2025-11-27 16:30:03,143 | INFO     | time since job start (126531s) is within the limit (172800.0s)
[2025-11-27 11:31:12] 2025-11-27 16:30:04,213 | INFO     | monitor loop #7270: job 0:6891106900 is in state 'finished'
[2025-11-27 11:31:12] 2025-11-27 16:30:04,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:31:12] 2025-11-27 16:30:05,150 | INFO     | time since job start (126533s) is within the limit (172800.0s)
[2025-11-27 11:31:12] 2025-11-27 16:30:06,720 | INFO     | monitor loop #7271: job 0:6891106900 is in state 'finished'
[2025-11-27 11:31:12] 2025-11-27 16:30:06,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:31:12] 2025-11-27 16:30:07,141 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 11:31:12] 2025-11-27 16:30:07,173 | INFO     | time since job start (126535s) is within the limit (172800.0s)
[2025-11-27 11:31:12] 2025-11-27 16:30:07,220 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2582.5550729166666
[2025-11-27 11:31:12] 2025-11-27 16:30:07,259 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6891106900/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:31:12] 2025-11-27 16:30:07,261 | INFO     | extracted standard info from prmon json
[2025-11-27 11:31:12] 2025-11-27 16:30:07,261 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:31:12] 2025-11-27 16:30:07,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:31:12] 2025-11-27 16:30:07,298 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:31:12] 2025-11-27 16:30:07,302 | INFO     | sum of square deviations: 2754455012565.628
[2025-11-27 11:31:12] 2025-11-27 16:30:07,526 | INFO     | sum of deviations: 16397042562215.264
[2025-11-27 11:31:12] 2025-11-27 16:30:07,527 | INFO     | mean x: 1764197782.286818
[2025-11-27 11:31:12] 2025-11-27 16:30:07,527 | INFO     | mean y: 3031623.4978271364
[2025-11-27 11:31:12] 2025-11-27 16:30:07,527 | INFO     | intersect: -10499091661.274282
[2025-11-27 11:31:12] 2025-11-27 16:30:07,538 | INFO     | chi2: 21.941373350373834
[2025-11-27 11:31:12] 2025-11-27 16:30:07,549 | INFO     | sum of square deviations: 2734556318716.6147
[2025-11-27 11:31:12] 2025-11-27 16:30:07,744 | INFO     | sum of deviations: 17179115892313.959
[2025-11-27 11:31:12] 2025-11-27 16:30:07,745 | INFO     | mean x: 1764197629.7967086
[2025-11-27 11:31:12] 2025-11-27 16:30:07,745 | INFO     | mean y: 3037615.995159729
[2025-11-27 11:31:12] 2025-11-27 16:30:07,745 | INFO     | intersect: -11080060337.331009
[2025-11-27 11:31:12] 2025-11-27 16:30:07,752 | INFO     | chi2: 18.287072858530465
[2025-11-27 11:31:12] 2025-11-27 16:30:07,752 | INFO     | current chi2=18.287072858530465 (change=16.654839391724344 %)
[2025-11-27 11:31:12] 2025-11-27 16:30:07,752 | INFO     | right removable region: 2065
[2025-11-27 11:31:12] 2025-11-27 16:30:07,759 | INFO     | sum of square deviations: 2734551029216.025
[2025-11-27 11:31:12] 2025-11-27 16:30:07,932 | INFO     | sum of deviations: 15479929797919.852
[2025-11-27 11:31:12] 2025-11-27 16:30:07,933 | INFO     | mean x: 1764197934.7971926
[2025-11-27 11:31:12] 2025-11-27 16:30:07,946 | INFO     | mean y: 3038650.3862536303
[2025-11-27 11:31:12] 2025-11-27 16:30:07,947 | INFO     | intersect: -9983851295.538507
[2025-11-27 11:31:12] 2025-11-27 16:30:08,076 | INFO     | chi2: 17.394890735249756
[2025-11-27 11:31:12] 2025-11-27 16:30:08,076 | INFO     | current chi2=17.394890735249756 (change=20.7210485074154 %)
[2025-11-27 11:31:12] 2025-11-27 16:30:08,076 | INFO     | left removable region: 10
[2025-11-27 11:31:12] 2025-11-27 16:30:08,198 | INFO     | sum of square deviations: 2691106941977.8584
[2025-11-27 11:31:12] 2025-11-27 16:30:08,875 | INFO     | sum of deviations: 15608036886732.416
[2025-11-27 11:31:12] 2025-11-27 16:30:08,876 | INFO     | mean x: 1764197904.3182483
[2025-11-27 11:31:12] 2025-11-27 16:30:08,876 | INFO     | mean y: 3051933.509975669
[2025-11-27 11:31:12] 2025-11-27 16:30:08,876 | INFO     | intersect: -10229044582.82453
[2025-11-27 11:31:12] 2025-11-27 16:30:08,883 | INFO     | chi2: 9.824999126431472
[2025-11-27 11:31:12] 2025-11-27 16:30:08,883 | INFO     | current memory leak: 5.80 B/s (using 2055 data points, chi2=9.82)
[2025-11-27 11:31:12] 2025-11-27 16:30:08,890 | INFO     | could have reported an average CPU frequency of 2554 MHz (72 samples)
[2025-11-27 11:31:12] 2025-11-27 16:30:08,890 | INFO     | ..............................
[2025-11-27 11:31:12] 2025-11-27 16:30:08,890 | INFO     | . Timing measurements:
[2025-11-27 11:31:12] 2025-11-27 16:30:08,890 | INFO     | . get job = 0 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,890 | INFO     | . initial setup = 8 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,891 | INFO     | . payload setup = 54 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,891 | INFO     | . stage-in = 0 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,891 | INFO     | . payload execution = 126346 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,891 | INFO     | . stage-out = 12 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,891 | INFO     | . log creation = 3 s
[2025-11-27 11:31:12] 2025-11-27 16:30:08,891 | INFO     | ..............................
[2025-11-27 11:31:12] 2025-11-27 16:30:09,182 | INFO     | time since job start (126537s) is within the limit (172800.0s)
[2025-11-27 11:31:12] 2025-11-27 16:30:09,343 | INFO     | 
[2025-11-27 11:31:12] 2025-11-27 16:30:09,344 | INFO     | job summary report
[2025-11-27 11:31:12] 2025-11-27 16:30:09,344 | INFO     | --------------------------------------------------
[2025-11-27 11:31:12] 2025-11-27 16:30:09,344 | INFO     | PanDA job id: 6891106900
[2025-11-27 11:31:12] 2025-11-27 16:30:09,344 | INFO     | task id: 47483661
[2025-11-27 11:31:12] 2025-11-27 16:30:09,344 | INFO     | errors: (none)
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | pilot state: finished 
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | transexitcode: 0
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | exeerrorcode: 0
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | exeerrordiag: 
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | exitcode: 0
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | exitmsg: OK
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | cpuconsumptiontime: 295608 s
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | nevents: 1000
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | neventsw: 0
[2025-11-27 11:31:12] 2025-11-27 16:30:09,345 | INFO     | pid: 3563519
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | pgrp: 3563519
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | corecount: 9
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | event service: False
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | sizes: {0: 2284077, 1: 2284133, 3: 2284360, 4: 2284360, 15: 2284388, 26: 2284416, 38: 2284416, 39: 2284834, 50: 2284862, 126404: 2366912, 126405: 2366911, 126419: 
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | --------------------------------------------------
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | 
[2025-11-27 11:31:12] 2025-11-27 16:30:09,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 11:31:12] 2025-11-27 16:30:09,467 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:31:12] 2025-11-27 16:30:09,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:31:12] 2025-11-27 16:30:09,520 | INFO     | job 6891106900 has completed (purged errors)
[2025-11-27 11:31:12] 2025-11-27 16:30:09,520 | INFO     | overall cleanup function is called
[2025-11-27 11:31:12] 2025-11-27 16:30:10,595 | INFO     | --- collectZombieJob: --- 10, [3563519]
[2025-11-27 11:31:12] 2025-11-27 16:30:10,596 | INFO     | zombie collector waiting for pid 3563519
[2025-11-27 11:31:12] 2025-11-27 16:30:10,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:31:12] 2025-11-27 16:30:10,596 | INFO     | collected zombie processes
[2025-11-27 11:31:12] 2025-11-27 16:30:10,596 | INFO     | will attempt to kill all subprocesses of pid=3563519
[2025-11-27 11:31:12] 2025-11-27 16:30:12,690 | INFO     | PID=3556571 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:31:12] 2025-11-27 16:30:12,690 | INFO     | .. there are 19 such processes running
[2025-11-27 11:31:12] 2025-11-27 16:30:12,807 | INFO     | process IDs to be killed: [3563519] (in reverse order)
[2025-11-27 11:31:12] 2025-11-27 16:30:13,184 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:31:12] 2025-11-27 16:30:13,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:31:12] 2025-11-27 16:30:13,267 | INFO     | did not find any defunct processes belonging to 3563519
[2025-11-27 11:31:12] 2025-11-27 16:30:13,308 | INFO     | did not find any defunct processes belonging to 3563519
[2025-11-27 11:31:12] 2025-11-27 16:30:13,315 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:31:12] 2025-11-27 16:30:13,315 | INFO     | ready for new job
[2025-11-27 11:31:12] 2025-11-27 16:30:13,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:31:12] 2025-11-27 16:30:13,340 | INFO     | ***************************************
[2025-11-27 11:31:12] 2025-11-27 16:30:13,344 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:31:12] 2025-11-27 16:30:13,345 | INFO     | ***************************************
[2025-11-27 11:31:12] 2025-11-27 16:30:13,345 | INFO     | 
[2025-11-27 11:31:12] 2025-11-27 16:30:13,355 | INFO     | architecture information:
[2025-11-27 11:31:12] 2025-11-27 16:30:13,357 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:31:12] 2025-11-27 16:30:13,566 | INFO     | cat /etc/os-release:
[2025-11-27 11:31:12] NAME="CentOS Linux"
[2025-11-27 11:31:12] VERSION="7 (Core)"
[2025-11-27 11:31:12] ID="centos"
[2025-11-27 11:31:12] ID_LIKE="rhel fedora"
[2025-11-27 11:31:12] VERSION_ID="7"
[2025-11-27 11:31:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:31:12] ANSI_COLOR="0;31"
[2025-11-27 11:31:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:31:12] HOME_URL="https://www.centos.org/"
[2025-11-27 11:31:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:31:12] 
[2025-11-27 11:31:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:31:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:31:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:31:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:31:12] 
[2025-11-27 11:31:12] 2025-11-27 16:30:13,566 | INFO     | ***************************************
[2025-11-27 11:31:12] 2025-11-27 16:30:14,069 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 11:31:12] 2025-11-27 16:30:14,153 | INFO     | sufficient remaining disk space (120903958528 B)
[2025-11-27 11:31:12] 2025-11-27 16:30:14,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:31:12] 2025-11-27 16:30:14,158 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:31:12] 2025-11-27 16:30:14,160 | INFO     | update_server=False
[2025-11-27 11:31:12] 2025-11-27 16:30:14,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:31:12] 2025-11-27 16:30:14,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:31:12] 2025-11-27 16:30:14,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:31:12] 2025-11-27 16:30:14,284 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 11:31:12] 2025-11-27 16:30:14,284 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 11:31:12] 2025-11-27 16:30:14,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:31:12] 2025-11-27 16:30:14,284 | INFO     | will abort loop
[2025-11-27 11:31:12] 2025-11-27 16:30:14,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:31:12] 2025-11-27 16:30:14,822 | INFO     | all data control threads have been joined
[2025-11-27 11:31:12] 2025-11-27 16:30:15,183 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,189 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,290 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,378 | INFO     | all payload control threads have been joined
[2025-11-27 11:31:12] 2025-11-27 16:30:15,677 | INFO     | all job control threads have been joined
[2025-11-27 11:31:12] 2025-11-27 16:30:15,828 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,828 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,829 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,830 | INFO     | [data] control thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,834 | INFO     | [job] validate thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,970 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:15,983 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:16,384 | INFO     | [payload] control thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:16,480 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:16,651 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:16,688 | INFO     | [job] control thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:18,214 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:31:12] 2025-11-27 16:30:48,803 | INFO     | PID=3556571 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:31:12] 2025-11-27 16:30:48,803 | INFO     | .. there are 19 such processes running
[2025-11-27 11:31:12] 2025-11-27 16:30:48,822 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:31:12] 2025-11-27 16:30:48,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:31:12] 2025-11-27 16:30:48,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:31:12] 2025-11-27 16:31:03,493 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:31:12] 2025-11-27 16:31:04,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665820268352)>', '<ExcThread(monitor, started 140665321146112)>']
[2025-11-27 11:31:12] 2025-11-27 16:31:05,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:31:12] 2025-11-27 16:31:05,031 | INFO     | [monitor] control thread has ended
[2025-11-27 11:31:12] 2025-11-27 16:31:09,798 | INFO     | all workflow threads have been joined
[2025-11-27 11:31:12] 2025-11-27 16:31:09,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:31:12] 2025-11-27 16:31:09,798 | INFO     | traces error code: 0
[2025-11-27 11:31:12] 2025-11-27 16:31:09,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:31:12] 2025-11-27 16:31:10,566 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:31:12] 2025-11-27 16:31:10,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:31:12] 2025-11-27 16:31:10,592 [wrapper] pilotpid: 3556571
[2025-11-27 11:31:12] 2025-11-27 16:31:10,608 [wrapper] Pilot exit status: 0
[2025-11-27 11:31:12] 2025-11-27 16:31:10,694 [wrapper] pandaids: 6891106900
[2025-11-27 11:31:12] 2025-11-27 16:31:10,838 [wrapper] cleanup supervisor_pilot   96506 3556572
[2025-11-27 11:31:12] 2025-11-27 16:31:10,864 [wrapper] Test setup, not cleaning
[2025-11-27 11:31:12] 2025-11-27 16:31:10,873 [wrapper] apfmon messages muted
[2025-11-27 11:31:12] 2025-11-27 16:31:10,891 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:31:12] 2025-11-27 16:31:10,909 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:31:12]  *** Error codes and diagnostics ***
[2025-11-27 11:31:12]     "exeErrorCode": 0,
[2025-11-27 11:31:12]     "exeErrorDiag": "",
[2025-11-27 11:31:12]     "pilotErrorCode": 0,
[2025-11-27 11:31:12]     "pilotErrorDiag": "",
[2025-11-27 11:31:12]  *** Listing of results directory ***
[2025-11-27 11:31:12] total 1329048
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-27 11:31:12] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:31:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:19 run_atlas
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:19 job.xml
[2025-11-27 11:31:12] -rw-r--r--. 2 boincer umatlas 409603981 Nov 26 00:19 EVNT.47483658._000280.pool.root.1
[2025-11-27 11:31:12] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:19 input.tar.gz
[2025-11-27 11:31:12] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:19 start_atlas.sh
[2025-11-27 11:31:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:19 shared
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:19 boinc_lockfile
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:19 pandaJob.out
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas    991877 Nov 26 00:21 agis_schedconf.cvmfs.json
[2025-11-27 11:31:12] drwx------. 5 boincer umatlas      4096 Nov 26 00:21 pilot3
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas       533 Nov 27 11:08 boinc_task_state.xml
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas 910352786 Nov 27 11:26 HITS.47483661._002495.pool.root.1
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas      6881 Nov 27 11:28 init_data.xml
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas      1064 Nov 27 11:29 memory_monitor_summary.json
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas   1516240 Nov 27 11:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas   2999311 Nov 27 11:29 log.47483661._002495.job.log.tgz.1
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas      8631 Nov 27 11:30 heartbeat.json
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas        95 Nov 27 11:30 pilot_heartbeat.json
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas      5011 Nov 27 11:31 pilotlog.txt
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas  15533742 Nov 27 11:31 log.47483661._002495.job.log.1
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas       353 Nov 27 11:31 output.list
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 11:31 boinc_mmap_file
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas        29 Nov 27 11:31 wrapper_checkpoint.txt
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas       620 Nov 27 11:31 runtime_log
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas  18554880 Nov 27 11:31 result.tar.gz
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas      8715 Nov 27 11:31 runtime_log.err
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas       665 Nov 27 11:31 KPmNDmRtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8RKODmhIIyjn.diag
[2025-11-27 11:31:12] -rw-r--r--. 1 boincer umatlas     21881 Nov 27 11:31 stderr.txt
[2025-11-27 11:31:12] HITS file was successfully produced:
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas 910352786 Nov 27 11:26 shared/HITS.pool.root.1
[2025-11-27 11:31:12]  *** Contents of shared directory: ***
[2025-11-27 11:31:12] total 1307748
[2025-11-27 11:31:12] -rw-r--r--. 2 boincer umatlas 409603981 Nov 26 00:19 ATLAS.root_0
[2025-11-27 11:31:12] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:19 input.tar.gz
[2025-11-27 11:31:12] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:19 start_atlas.sh
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas 910352786 Nov 27 11:26 HITS.pool.root.1
[2025-11-27 11:31:12] -rw-------. 1 boincer umatlas  18554880 Nov 27 11:31 result.tar.gz
11:31:35 (3548132): run_atlas exited; CPU time 298858.783823
11:31:35 (3548132): called boinc_finish(0)

</stderr_txt>
]]>

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