Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:32 (1851551): wrapper (7.7.26015): starting
00:05:32 (1851551): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:05:33] Arguments: --nthreads 9
[2025-11-26 00:05:33] Threads: 9
[2025-11-26 00:05:33] Checking for CVMFS
[2025-11-26 00:05:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:05:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:05:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:05:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:05:35] 2.13.3.0 44796 29466 376700 153309 3 764 23800292 32947201 30598 16776704 0 116074701 99.462 160957725 35588 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:05:35] CVMFS is ok
[2025-11-26 00:05:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:05:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:05:35] Further information can be found at the LHC@home message board.
[2025-11-26 00:05:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:05:35] Checking for apptainer binary...
[2025-11-26 00:05:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:05:35] Running /usr/bin/apptainer --version
[2025-11-26 00:05:35] apptainer version 1.4.4-1.el9
[2025-11-26 00:05:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:05:35] c6-6-8-2.aglt2.org
[2025-11-26 00:05:35] apptainer works
[2025-11-26 00:05:35] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:05:35] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:05:36] Starting ATLAS job with PandaID=6891106895
[2025-11-26 00:05:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:48:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:48:04] 2025-11-27 07:47:12,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:48:04] 2025-11-27 07:47:14,500 | INFO     | PID=1862328 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:48:04] 2025-11-27 07:47:14,500 | INFO     | .. there are 39 such processes running
[2025-11-27 02:48:04] 2025-11-27 07:47:15,336 | INFO     | monitor loop #5034: job 0:6891106895 is in state 'finished'
[2025-11-27 02:48:04] 2025-11-27 07:47:15,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:48:04] 2025-11-27 07:47:15,501 | INFO     | time since job start (96022s) is within the limit (172800.0s)
[2025-11-27 02:48:04] 2025-11-27 07:47:17,508 | INFO     | time since job start (96024s) is within the limit (172800.0s)
[2025-11-27 02:48:04] 2025-11-27 07:47:17,845 | INFO     | monitor loop #5035: job 0:6891106895 is in state 'finished'
[2025-11-27 02:48:04] 2025-11-27 07:47:17,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:48:04] 2025-11-27 07:47:19,540 | INFO     | time since job start (96026s) is within the limit (172800.0s)
[2025-11-27 02:48:04] 2025-11-27 07:47:20,380 | INFO     | monitor loop #5036: job 0:6891106895 is in state 'finished'
[2025-11-27 02:48:04] 2025-11-27 07:47:20,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:48:04] 2025-11-27 07:47:21,546 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 02:48:04] 2025-11-27 07:47:21,569 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2572.906322916667
[2025-11-27 02:48:04] 2025-11-27 07:47:21,573 | INFO     | time since job start (96028s) is within the limit (172800.0s)
[2025-11-27 02:48:04] 2025-11-27 07:47:21,694 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6891106895/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:48:04] 2025-11-27 07:47:21,695 | INFO     | extracted standard info from prmon json
[2025-11-27 02:48:04] 2025-11-27 07:47:21,695 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:48:04] 2025-11-27 07:47:21,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:48:04] 2025-11-27 07:47:21,885 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:48:04] 2025-11-27 07:47:21,908 | INFO     | sum of square deviations: 1202251991353.833
[2025-11-27 02:48:04] 2025-11-27 07:47:22,279 | INFO     | sum of deviations: 6997970271032.11
[2025-11-27 02:48:04] 2025-11-27 07:47:22,280 | INFO     | mean x: 1764181659.1133037
[2025-11-27 02:48:04] 2025-11-27 07:47:22,280 | INFO     | mean y: 3045041.903882877
[2025-11-27 02:48:04] 2025-11-27 07:47:22,280 | INFO     | intersect: -10265759578.059988
[2025-11-27 02:48:04] 2025-11-27 07:47:22,307 | INFO     | chi2: 21.90949909852567
[2025-11-27 02:48:04] 2025-11-27 07:47:22,310 | INFO     | sum of square deviations: 1190810984836.468
[2025-11-27 02:48:04] 2025-11-27 07:47:22,682 | INFO     | sum of deviations: 7588375126851.696
[2025-11-27 02:48:04] 2025-11-27 07:47:22,683 | INFO     | mean x: 1764181506.6264367
[2025-11-27 02:48:04] 2025-11-27 07:47:22,683 | INFO     | mean y: 3052909.3020434226
[2025-11-27 02:48:04] 2025-11-27 07:47:22,683 | INFO     | intersect: -11239093186.599358
[2025-11-27 02:48:04] 2025-11-27 07:47:22,685 | INFO     | chi2: 18.379810887445068
[2025-11-27 02:48:04] 2025-11-27 07:47:22,685 | INFO     | current chi2=18.379810887445068 (change=16.11030994003018 %)
[2025-11-27 02:48:04] 2025-11-27 07:47:22,686 | INFO     | right removable region: 1565
[2025-11-27 02:48:04] 2025-11-27 07:47:22,706 | INFO     | sum of square deviations: 1190807043016.4648
[2025-11-27 02:48:04] 2025-11-27 07:47:22,997 | INFO     | monitor loop #5037: job 0:6891106895 is in state 'finished'
[2025-11-27 02:48:04] 2025-11-27 07:47:22,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:48:04] 2025-11-27 07:47:23,189 | INFO     | sum of deviations: 6305381279722.252
[2025-11-27 02:48:04] 2025-11-27 07:47:23,214 | INFO     | mean x: 1764181811.6264367
[2025-11-27 02:48:04] 2025-11-27 07:47:23,214 | INFO     | mean y: 3054270.5593869733
[2025-11-27 02:48:04] 2025-11-27 07:47:23,214 | INFO     | intersect: -9338374329.72646
[2025-11-27 02:48:04] 2025-11-27 07:47:23,216 | INFO     | chi2: 17.351667890597206
[2025-11-27 02:48:04] 2025-11-27 07:47:23,216 | INFO     | current chi2=17.351667890597206 (change=20.802991375714154 %)
[2025-11-27 02:48:04] 2025-11-27 07:47:23,217 | INFO     | left removable region: 10
[2025-11-27 02:48:04] 2025-11-27 07:47:23,246 | INFO     | sum of square deviations: 1165888951192.338
[2025-11-27 02:48:04] 2025-11-27 07:47:23,579 | INFO     | sum of deviations: 6386986456394.491
[2025-11-27 02:48:04] 2025-11-27 07:47:23,580 | INFO     | mean x: 1764181781.155627
[2025-11-27 02:48:04] 2025-11-27 07:47:23,580 | INFO     | mean y: 3071963.6508038584
[2025-11-27 02:48:04] 2025-11-27 07:47:23,580 | INFO     | intersect: -9661489254.924496
[2025-11-27 02:48:04] 2025-11-27 07:47:23,582 | INFO     | chi2: 9.680401818913197
[2025-11-27 02:48:04] 2025-11-27 07:47:23,583 | INFO     | current memory leak: 5.48 B/s (using 1555 data points, chi2=9.68)
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | could have reported an average CPU frequency of 2573 MHz (56 samples)
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | ..............................
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | . Timing measurements:
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | . get job = 0 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | . initial setup = 4 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | . payload setup = 55 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,607 | INFO     | . stage-in = 0 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,608 | INFO     | . payload execution = 95853 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,608 | INFO     | . stage-out = 14 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,608 | INFO     | . log creation = 1 s
[2025-11-27 02:48:04] 2025-11-27 07:47:23,608 | INFO     | ..............................
[2025-11-27 02:48:04] 2025-11-27 07:47:23,706 | INFO     | time since job start (96030s) is within the limit (172800.0s)
[2025-11-27 02:48:04] 2025-11-27 07:47:24,351 | INFO     | 
[2025-11-27 02:48:04] 2025-11-27 07:47:24,354 | INFO     | job summary report
[2025-11-27 02:48:04] 2025-11-27 07:47:24,354 | INFO     | --------------------------------------------------
[2025-11-27 02:48:04] 2025-11-27 07:47:24,354 | INFO     | PanDA job id: 6891106895
[2025-11-27 02:48:04] 2025-11-27 07:47:24,354 | INFO     | task id: 47483661
[2025-11-27 02:48:04] 2025-11-27 07:47:24,354 | INFO     | errors: (none)
[2025-11-27 02:48:04] 2025-11-27 07:47:24,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | pilot state: finished 
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | transexitcode: 0
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | exeerrorcode: 0
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | exeerrordiag: 
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | exitcode: 0
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | exitmsg: OK
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | cpuconsumptiontime: 288069 s
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | nevents: 1000
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | neventsw: 0
[2025-11-27 02:48:04] 2025-11-27 07:47:24,355 | INFO     | pid: 1887026
[2025-11-27 02:48:04] 2025-11-27 07:47:24,375 | INFO     | pgrp: 1887026
[2025-11-27 02:48:04] 2025-11-27 07:47:24,376 | INFO     | corecount: 9
[2025-11-27 02:48:04] 2025-11-27 07:47:24,376 | INFO     | event service: False
[2025-11-27 02:48:04] 2025-11-27 07:47:24,376 | INFO     | sizes: {0: 2284133, 1: 2284332, 2: 2284332, 13: 2284360, 24: 2284416, 34: 2284706, 36: 2284862, 95913: 2353041, 95928: 2362035, 95930: 2362091, 95960: 2362337}
[2025-11-27 02:48:04] 2025-11-27 07:47:24,376 | INFO     | --------------------------------------------------
[2025-11-27 02:48:04] 2025-11-27 07:47:24,376 | INFO     | 
[2025-11-27 02:48:04] 2025-11-27 07:47:24,376 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 02:48:04] 2025-11-27 07:47:24,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:48:04] 2025-11-27 07:47:24,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:48:04] 2025-11-27 07:47:24,444 | INFO     | job 6891106895 has completed (purged errors)
[2025-11-27 02:48:04] 2025-11-27 07:47:24,444 | INFO     | overall cleanup function is called
[2025-11-27 02:48:04] 2025-11-27 07:47:25,503 | INFO     | --- collectZombieJob: --- 10, [1887026]
[2025-11-27 02:48:04] 2025-11-27 07:47:25,504 | INFO     | zombie collector waiting for pid 1887026
[2025-11-27 02:48:04] 2025-11-27 07:47:25,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:48:04] 2025-11-27 07:47:25,504 | INFO     | collected zombie processes
[2025-11-27 02:48:04] 2025-11-27 07:47:25,504 | INFO     | will attempt to kill all subprocesses of pid=1887026
[2025-11-27 02:48:04] 2025-11-27 07:47:30,462 | INFO     | process IDs to be killed: [1887026] (in reverse order)
[2025-11-27 02:48:04] 2025-11-27 07:47:30,845 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:48:04] 2025-11-27 07:47:30,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:48:04] 2025-11-27 07:47:30,887 | INFO     | did not find any defunct processes belonging to 1887026
[2025-11-27 02:48:04] 2025-11-27 07:47:30,925 | INFO     | did not find any defunct processes belonging to 1887026
[2025-11-27 02:48:04] 2025-11-27 07:47:30,930 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:48:04] 2025-11-27 07:47:30,931 | INFO     | ready for new job
[2025-11-27 02:48:04] 2025-11-27 07:47:30,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:48:04] 2025-11-27 07:47:30,937 | INFO     | ***************************************
[2025-11-27 02:48:04] 2025-11-27 07:47:30,938 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:48:04] 2025-11-27 07:47:30,938 | INFO     | ***************************************
[2025-11-27 02:48:04] 2025-11-27 07:47:30,938 | INFO     | 
[2025-11-27 02:48:04] 2025-11-27 07:47:30,943 | INFO     | architecture information:
[2025-11-27 02:48:04] 2025-11-27 07:47:30,948 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:48:04] 2025-11-27 07:47:31,006 | INFO     | cat /etc/os-release:
[2025-11-27 02:48:04] NAME="CentOS Linux"
[2025-11-27 02:48:04] VERSION="7 (Core)"
[2025-11-27 02:48:04] ID="centos"
[2025-11-27 02:48:04] ID_LIKE="rhel fedora"
[2025-11-27 02:48:04] VERSION_ID="7"
[2025-11-27 02:48:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:48:04] ANSI_COLOR="0;31"
[2025-11-27 02:48:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:48:04] HOME_URL="https://www.centos.org/"
[2025-11-27 02:48:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:48:04] 
[2025-11-27 02:48:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:48:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:48:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:48:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:48:04] 
[2025-11-27 02:48:04] 2025-11-27 07:47:31,006 | INFO     | ***************************************
[2025-11-27 02:48:04] 2025-11-27 07:47:31,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 02:48:04] 2025-11-27 07:47:31,554 | INFO     | sufficient remaining disk space (69265784832 B)
[2025-11-27 02:48:04] 2025-11-27 07:47:31,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:48:04] 2025-11-27 07:47:31,555 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:48:04] 2025-11-27 07:47:31,555 | INFO     | update_server=False
[2025-11-27 02:48:04] 2025-11-27 07:47:31,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:48:04] 2025-11-27 07:47:31,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:48:04] 2025-11-27 07:47:31,643 | INFO     | all payload control threads have been joined
[2025-11-27 02:48:04] 2025-11-27 07:47:31,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:48:04] 2025-11-27 07:47:31,744 | INFO     | aborting loop
[2025-11-27 02:48:04] 2025-11-27 07:47:31,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:48:04] 2025-11-27 07:47:32,013 | INFO     | all data control threads have been joined
[2025-11-27 02:48:04] 2025-11-27 07:47:32,191 | INFO     | all job control threads have been joined
[2025-11-27 02:48:04] 2025-11-27 07:47:32,562 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,620 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,659 | INFO     | [payload] control thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,753 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,914 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,954 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,963 | INFO     | [job] validate thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:32,963 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:33,025 | INFO     | [data] control thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:33,131 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:33,157 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:33,208 | INFO     | [job] control thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:33,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:48:04] 2025-11-27 07:47:33,563 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:34,525 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:35,940 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:48:04] 2025-11-27 07:47:51,941 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:48:04] 2025-11-27 07:47:54,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169806993216)>', '<ExcThread(monitor, started 140169294354176)>']
[2025-11-27 02:48:04] 2025-11-27 07:47:55,751 | INFO     | 96037s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 02:48:04] 2025-11-27 07:47:59,098 | INFO     | all workflow threads have been joined
[2025-11-27 02:48:04] 2025-11-27 07:47:59,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:48:04] 2025-11-27 07:47:59,099 | INFO     | traces error code: 0
[2025-11-27 02:48:04] 2025-11-27 07:47:59,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:48:04] 2025-11-27 07:48:01,734 | INFO     | PID=1862328 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:48:04] 2025-11-27 07:48:01,735 | INFO     | .. there are 39 such processes running
[2025-11-27 02:48:04] 2025-11-27 07:48:01,736 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:48:04] 2025-11-27 07:48:01,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:48:04] 2025-11-27 07:48:01,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:48:04] 2025-11-27 07:48:01,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:48:04] 2025-11-27 07:48:01,736 | INFO     | [monitor] control thread has ended
[2025-11-27 02:48:04] 2025-11-27 07:48:03,301 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:48:04] 2025-11-27 07:48:03,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:48:04] 2025-11-27 07:48:03,355 [wrapper] pilotpid: 1862328
[2025-11-27 02:48:04] 2025-11-27 07:48:03,384 [wrapper] Pilot exit status: 0
[2025-11-27 02:48:04] 2025-11-27 07:48:03,584 [wrapper] pandaids: 6891106895
[2025-11-27 02:48:04] 2025-11-27 07:48:03,825 [wrapper] cleanup supervisor_pilot 3467315 1862329
[2025-11-27 02:48:04] 2025-11-27 07:48:03,838 [wrapper] Test setup, not cleaning
[2025-11-27 02:48:04] 2025-11-27 07:48:03,865 [wrapper] apfmon messages muted
[2025-11-27 02:48:04] 2025-11-27 07:48:03,883 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:48:04] 2025-11-27 07:48:03,898 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:48:04]  *** Error codes and diagnostics ***
[2025-11-27 02:48:04]     "exeErrorCode": 0,
[2025-11-27 02:48:04]     "exeErrorDiag": "",
[2025-11-27 02:48:04]     "pilotErrorCode": 0,
[2025-11-27 02:48:04]     "pilotErrorDiag": "",
[2025-11-27 02:48:04]  *** Listing of results directory ***
[2025-11-27 02:48:04] total 1329868
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-27 02:48:04] -rwx------ 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas       100 Nov 26 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:48:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 00:05 run_atlas
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas       105 Nov 26 00:05 job.xml
[2025-11-27 02:48:04] -rw-r--r-- 2 boincer umatlas 410695556 Nov 26 00:05 EVNT.47483658._000279.pool.root.1
[2025-11-27 02:48:04] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-27 02:48:04] drwxrwx--x 2 boincer umatlas      4096 Nov 26 00:05 shared
[2025-11-27 02:48:04] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 00:05 input.tar.gz
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas         0 Nov 26 00:05 boinc_lockfile
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 00:05 pandaJob.out
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas    991877 Nov 26 00:06 agis_schedconf.cvmfs.json
[2025-11-27 02:48:04] drwx------ 5 boincer umatlas      4096 Nov 26 00:06 pilot3
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas       533 Nov 27 02:28 boinc_task_state.xml
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas 919545988 Nov 27 02:44 HITS.47483661._002490.pool.root.1
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas      6878 Nov 27 02:45 init_data.xml
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas      1071 Nov 27 02:46 memory_monitor_summary.json
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas   1516240 Nov 27 02:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas   2615227 Nov 27 02:46 log.47483661._002490.job.log.tgz.1
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas      8629 Nov 27 02:47 heartbeat.json
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 02:48 boinc_mmap_file
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas        95 Nov 27 02:48 pilot_heartbeat.json
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas       823 Nov 27 02:48 pilotlog.txt
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas        29 Nov 27 02:48 wrapper_checkpoint.txt
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas  11197310 Nov 27 02:48 log.47483661._002490.job.log.1
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas       353 Nov 27 02:48 output.list
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas       620 Nov 27 02:48 runtime_log
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas  13834240 Nov 27 02:48 result.tar.gz
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas      8704 Nov 27 02:48 runtime_log.err
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas       660 Nov 27 02:48 RBkNDmRtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6RKODmTcogJm.diag
[2025-11-27 02:48:04] -rw-r--r-- 1 boincer umatlas     21911 Nov 27 02:48 stderr.txt
[2025-11-27 02:48:04] HITS file was successfully produced:
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas 919545988 Nov 27 02:44 shared/HITS.pool.root.1
[2025-11-27 02:48:04]  *** Contents of shared directory: ***
[2025-11-27 02:48:04] total 1313184
[2025-11-27 02:48:04] -rw-r--r-- 2 boincer umatlas 410695556 Nov 26 00:05 ATLAS.root_0
[2025-11-27 02:48:04] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-27 02:48:04] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 00:05 input.tar.gz
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas 919545988 Nov 27 02:44 HITS.pool.root.1
[2025-11-27 02:48:04] -rw------- 1 boincer umatlas  13834240 Nov 27 02:48 result.tar.gz
02:48:06 (1851551): run_atlas exited; CPU time 291599.084721
02:48:06 (1851551): called boinc_finish(0)

</stderr_txt>
]]>

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