Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:39 (1723768): wrapper (7.7.26015): starting
14:29:39 (1723768): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 14:29:39] Arguments: --nthreads 8
[2025-11-26 14:29:39] Threads: 8
[2025-11-26 14:29:39] Checking for CVMFS
[2025-11-26 14:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:29:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:29:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:29:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:29:41] 2.13.2.0 6969 37133 245580 153333 1 565 24506373 40960001 27711 16776704 0 107855744 99.617 97393107 35761 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 14:29:41] CVMFS is ok
[2025-11-26 14:29:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:29:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:29:41] Further information can be found at the LHC@home message board.
[2025-11-26 14:29:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:29:41] Checking for apptainer binary...
[2025-11-26 14:29:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:29:41] Running /usr/bin/apptainer --version
[2025-11-26 14:29:41] apptainer version 1.4.4-1.el9
[2025-11-26 14:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:29:42] c-212-14.aglt2.org
[2025-11-26 14:29:42] apptainer works
[2025-11-26 14:29:42] Set ATHENA_PROC_NUMBER=8
[2025-11-26 14:29:42] Set ATHENA_CORE_NUMBER=8
[2025-11-26 14:29:42] Starting ATLAS job with PandaID=6891106786
[2025-11-26 14:29:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:39:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:39:56] 2025-11-27 21:39:08,584 | INFO     | time since job start (94093s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:10,100 | INFO     | monitor loop #5896: job 0:6891106786 is in state 'finished'
[2025-11-27 16:39:56] 2025-11-27 21:39:10,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:39:56] 2025-11-27 21:39:10,590 | INFO     | time since job start (94095s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:12,598 | INFO     | time since job start (94097s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:12,626 | INFO     | monitor loop #5897: job 0:6891106786 is in state 'finished'
[2025-11-27 16:39:56] 2025-11-27 21:39:12,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:39:56] 2025-11-27 21:39:14,605 | INFO     | time since job start (94099s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:15,131 | INFO     | monitor loop #5898: job 0:6891106786 is in state 'finished'
[2025-11-27 16:39:56] 2025-11-27 21:39:15,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:39:56] 2025-11-27 21:39:16,612 | INFO     | time since job start (94101s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:17,636 | INFO     | monitor loop #5899: job 0:6891106786 is in state 'finished'
[2025-11-27 16:39:56] 2025-11-27 21:39:17,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:39:56] 2025-11-27 21:39:18,619 | INFO     | time since job start (94103s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:20,141 | INFO     | monitor loop #5900: job 0:6891106786 is in state 'finished'
[2025-11-27 16:39:56] 2025-11-27 21:39:20,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:39:56] 2025-11-27 21:39:20,626 | INFO     | time since job start (94105s) is within the limit (172800.0s)
[2025-11-27 16:39:56] 2025-11-27 21:39:20,723 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 16:39:56] 2025-11-27 21:39:20,729 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3003.854885416667
[2025-11-27 16:39:56] 2025-11-27 21:39:20,746 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6891106786/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:39:56] 2025-11-27 21:39:20,746 | INFO     | extracted standard info from prmon json
[2025-11-27 16:39:56] 2025-11-27 21:39:20,746 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:39:56] 2025-11-27 21:39:20,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:39:56] 2025-11-27 21:39:20,803 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:39:56] 2025-11-27 21:39:20,804 | INFO     | sum of square deviations: 1134724034772.5356
[2025-11-27 16:39:56] 2025-11-27 21:39:20,900 | INFO     | sum of deviations: 5060904798751.514
[2025-11-27 16:39:56] 2025-11-27 21:39:20,901 | INFO     | mean x: 1764232544.4166126
[2025-11-27 16:39:56] 2025-11-27 21:39:20,901 | INFO     | mean y: 2846189.1674237507
[2025-11-27 16:39:56] 2025-11-27 21:39:20,901 | INFO     | intersect: -7865686314.368944
[2025-11-27 16:39:56] 2025-11-27 21:39:20,902 | INFO     | chi2: 38.873670550829694
[2025-11-27 16:39:56] 2025-11-27 21:39:20,908 | INFO     | sum of square deviations: 1123715266247.4688
[2025-11-27 16:39:56] 2025-11-27 21:39:20,968 | INFO     | sum of deviations: 5621593607445.258
[2025-11-27 16:39:56] 2025-11-27 21:39:20,968 | INFO     | mean x: 1764232391.9212239
[2025-11-27 16:39:56] 2025-11-27 21:39:20,968 | INFO     | mean y: 2853954.2005208335
[2025-11-27 16:39:56] 2025-11-27 21:39:20,968 | INFO     | intersect: -8823045127.505177
[2025-11-27 16:39:56] 2025-11-27 21:39:20,969 | INFO     | chi2: 34.80651931873519
[2025-11-27 16:39:56] 2025-11-27 21:39:20,970 | INFO     | current chi2=34.80651931873519 (change=10.462483152385763 %)
[2025-11-27 16:39:56] 2025-11-27 21:39:20,970 | INFO     | right removable region: 1535
[2025-11-27 16:39:56] 2025-11-27 21:39:20,971 | INFO     | sum of square deviations: 1123713934617.4683
[2025-11-27 16:39:56] 2025-11-27 21:39:21,015 | INFO     | sum of deviations: 4427557842556.1
[2025-11-27 16:39:56] 2025-11-27 21:39:21,016 | INFO     | mean x: 1764232696.9212239
[2025-11-27 16:39:56] 2025-11-27 21:39:21,016 | INFO     | mean y: 2854961.1744791665
[2025-11-27 16:39:56] 2025-11-27 21:39:21,016 | INFO     | intersect: -6948418020.953794
[2025-11-27 16:39:56] 2025-11-27 21:39:21,017 | INFO     | chi2: 34.44148375341353
[2025-11-27 16:39:56] 2025-11-27 21:39:21,017 | INFO     | current chi2=34.44148375341353 (change=11.401513504161667 %)
[2025-11-27 16:39:56] 2025-11-27 21:39:21,017 | INFO     | left removable region: 10
[2025-11-27 16:39:56] 2025-11-27 21:39:21,019 | INFO     | sum of square deviations: 1099744558301.951
[2025-11-27 16:39:56] 2025-11-27 21:39:21,064 | INFO     | sum of deviations: 4530917500804.317
[2025-11-27 16:39:56] 2025-11-27 21:39:21,064 | INFO     | mean x: 1764232666.4308197
[2025-11-27 16:39:56] 2025-11-27 21:39:21,065 | INFO     | mean y: 2871802.1593442624
[2025-11-27 16:39:56] 2025-11-27 21:39:21,065 | INFO     | intersect: -7265718529.548675
[2025-11-27 16:39:56] 2025-11-27 21:39:21,066 | INFO     | chi2: 26.543606373064936
[2025-11-27 16:39:56] 2025-11-27 21:39:21,066 | INFO     | current memory leak: 4.12 B/s (using 1525 data points, chi2=26.54)
[2025-11-27 16:39:56] 2025-11-27 21:39:21,067 | INFO     | could have reported an average CPU frequency of 3028 MHz (55 samples)
[2025-11-27 16:39:56] 2025-11-27 21:39:21,067 | INFO     | ..............................
[2025-11-27 16:39:56] 2025-11-27 21:39:21,067 | INFO     | . Timing measurements:
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . get job = 0 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . initial setup = 8 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . payload setup = 42 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . stage-in = 0 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . payload execution = 93976 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . stage-out = 7 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | . log creation = 1 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,068 | INFO     | ..............................
[2025-11-27 16:39:56] 2025-11-27 21:39:21,145 | INFO     | 
[2025-11-27 16:39:56] 2025-11-27 21:39:21,145 | INFO     | job summary report
[2025-11-27 16:39:56] 2025-11-27 21:39:21,145 | INFO     | --------------------------------------------------
[2025-11-27 16:39:56] 2025-11-27 21:39:21,145 | INFO     | PanDA job id: 6891106786
[2025-11-27 16:39:56] 2025-11-27 21:39:21,145 | INFO     | task id: 47483661
[2025-11-27 16:39:56] 2025-11-27 21:39:21,145 | INFO     | errors: (none)
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | pilot state: finished 
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | transexitcode: 0
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | exeerrorcode: 0
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | exeerrordiag: 
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | exitcode: 0
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | exitmsg: OK
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | cpuconsumptiontime: 216683 s
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | nevents: 1000
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | neventsw: 0
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | pid: 1738746
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | pgrp: 1738746
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | corecount: 8
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | event service: False
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | sizes: {0: 2284133, 1: 2284332, 2: 2284332, 13: 2284360, 21: 2284678, 24: 2284706, 94023: 2353932, 94024: 2353931, 94031: 2362981, 94032: 2363037, 94060: 2363283}
[2025-11-27 16:39:56] 2025-11-27 21:39:21,146 | INFO     | --------------------------------------------------
[2025-11-27 16:39:56] 2025-11-27 21:39:21,147 | INFO     | 
[2025-11-27 16:39:56] 2025-11-27 21:39:21,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | job 6891106786 has completed (purged errors)
[2025-11-27 16:39:56] 2025-11-27 21:39:21,190 | INFO     | overall cleanup function is called
[2025-11-27 16:39:56] 2025-11-27 21:39:22,206 | INFO     | --- collectZombieJob: --- 10, [1738746]
[2025-11-27 16:39:56] 2025-11-27 21:39:22,207 | INFO     | zombie collector waiting for pid 1738746
[2025-11-27 16:39:56] 2025-11-27 21:39:22,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:39:56] 2025-11-27 21:39:22,207 | INFO     | collected zombie processes
[2025-11-27 16:39:56] 2025-11-27 21:39:22,207 | INFO     | will attempt to kill all subprocesses of pid=1738746
[2025-11-27 16:39:56] 2025-11-27 21:39:23,038 | INFO     | process IDs to be killed: [1738746] (in reverse order)
[2025-11-27 16:39:56] 2025-11-27 21:39:23,343 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:39:56] 2025-11-27 21:39:23,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:39:56] 2025-11-27 21:39:23,465 | INFO     | did not find any defunct processes belonging to 1738746
[2025-11-27 16:39:56] 2025-11-27 21:39:23,504 | INFO     | did not find any defunct processes belonging to 1738746
[2025-11-27 16:39:56] 2025-11-27 21:39:23,516 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:39:56] 2025-11-27 21:39:23,516 | INFO     | ready for new job
[2025-11-27 16:39:56] 2025-11-27 21:39:23,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:39:56] 2025-11-27 21:39:23,527 | INFO     | ***************************************
[2025-11-27 16:39:56] 2025-11-27 21:39:23,527 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:39:56] 2025-11-27 21:39:23,527 | INFO     | ***************************************
[2025-11-27 16:39:56] 2025-11-27 21:39:23,531 | INFO     | 
[2025-11-27 16:39:56] 2025-11-27 21:39:23,541 | INFO     | architecture information:
[2025-11-27 16:39:56] 2025-11-27 21:39:23,549 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:39:56] 2025-11-27 21:39:23,588 | INFO     | cat /etc/os-release:
[2025-11-27 16:39:56] NAME="CentOS Linux"
[2025-11-27 16:39:56] VERSION="7 (Core)"
[2025-11-27 16:39:56] ID="centos"
[2025-11-27 16:39:56] ID_LIKE="rhel fedora"
[2025-11-27 16:39:56] VERSION_ID="7"
[2025-11-27 16:39:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:39:56] ANSI_COLOR="0;31"
[2025-11-27 16:39:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:39:56] HOME_URL="https://www.centos.org/"
[2025-11-27 16:39:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:39:56] 
[2025-11-27 16:39:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:39:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:39:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:39:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:39:56] 
[2025-11-27 16:39:56] 2025-11-27 21:39:23,588 | INFO     | ***************************************
[2025-11-27 16:39:56] 2025-11-27 21:39:24,092 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 16:39:56] 2025-11-27 21:39:24,159 | INFO     | sufficient remaining disk space (123055636480 B)
[2025-11-27 16:39:56] 2025-11-27 21:39:24,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:39:56] 2025-11-27 21:39:24,159 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:39:56] 2025-11-27 21:39:24,159 | INFO     | update_server=False
[2025-11-27 16:39:56] 2025-11-27 21:39:24,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:39:56] 2025-11-27 21:39:24,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:39:56] 2025-11-27 21:39:24,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:39:56] 2025-11-27 21:39:24,160 | INFO     | aborting loop
[2025-11-27 16:39:56] 2025-11-27 21:39:24,310 | INFO     | all data control threads have been joined
[2025-11-27 16:39:56] 2025-11-27 21:39:25,166 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:25,166 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:25,239 | INFO     | all payload control threads have been joined
[2025-11-27 16:39:56] 2025-11-27 21:39:25,317 | INFO     | [data] control thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:25,558 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:25,637 | INFO     | [job] validate thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:25,637 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:25,867 | INFO     | all job control threads have been joined
[2025-11-27 16:39:56] 2025-11-27 21:39:25,891 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,168 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:39:56] 2025-11-27 21:39:26,245 | INFO     | [payload] control thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,286 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,335 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,361 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:26,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:39:56] 2025-11-27 21:39:26,872 | INFO     | [job] control thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:27,175 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:30,714 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:39:56] 2025-11-27 21:39:40,263 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:39:56] 2025-11-27 21:39:41,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069020559168)>', '<ExcThread(monitor, started 140068513625856)>']
[2025-11-27 16:39:56] 2025-11-27 21:39:46,944 | INFO     | all workflow threads have been joined
[2025-11-27 16:39:56] 2025-11-27 21:39:46,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:39:56] 2025-11-27 21:39:46,945 | INFO     | traces error code: 0
[2025-11-27 16:39:56] 2025-11-27 21:39:46,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:39:56] 2025-11-27 21:39:54,775 | INFO     | PID=1730612 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:39:56] 2025-11-27 21:39:54,775 | INFO     | .. there are 25 such processes running
[2025-11-27 16:39:56] 2025-11-27 21:39:54,775 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:39:56] 2025-11-27 21:39:54,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:39:56] 2025-11-27 21:39:54,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:39:56] 2025-11-27 21:39:54,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:39:56] 2025-11-27 21:39:54,776 | INFO     | [monitor] control thread has ended
[2025-11-27 16:39:56] 2025-11-27 21:39:54,969 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:39:56] 2025-11-27 21:39:54,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:39:56] 2025-11-27 21:39:54,979 [wrapper] pilotpid: 1730612
[2025-11-27 16:39:56] 2025-11-27 21:39:54,999 [wrapper] Pilot exit status: 0
[2025-11-27 16:39:56] 2025-11-27 21:39:55,039 [wrapper] pandaids: 6891106786
[2025-11-27 16:39:56] 2025-11-27 21:39:55,371 [wrapper] cleanup supervisor_pilot 2831659 1730613
[2025-11-27 16:39:56] 2025-11-27 21:39:55,406 [wrapper] Test setup, not cleaning
[2025-11-27 16:39:56] 2025-11-27 21:39:55,447 [wrapper] apfmon messages muted
[2025-11-27 16:39:56] 2025-11-27 21:39:55,522 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:39:56] 2025-11-27 21:39:55,572 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:39:56]  *** Error codes and diagnostics ***
[2025-11-27 16:39:56]     "exeErrorCode": 0,
[2025-11-27 16:39:56]     "exeErrorDiag": "",
[2025-11-27 16:39:56]     "pilotErrorCode": 0,
[2025-11-27 16:39:56]     "pilotErrorDiag": "",
[2025-11-27 16:39:56]  *** Listing of results directory ***
[2025-11-27 16:39:56] total 1333696
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-27 16:39:56] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas       100 Nov 26 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:39:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 14:29 run_atlas
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas       105 Nov 26 14:29 job.xml
[2025-11-27 16:39:56] -rw-r--r--. 2 boincer umatlas 410665357 Nov 26 14:29 EVNT.47483658._000277.pool.root.1
[2025-11-27 16:39:56] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 14:29 start_atlas.sh
[2025-11-27 16:39:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 14:29 shared
[2025-11-27 16:39:56] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 14:29 input.tar.gz
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas         0 Nov 26 14:29 boinc_lockfile
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 14:29 pandaJob.out
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas    991522 Nov 26 14:30 agis_schedconf.cvmfs.json
[2025-11-27 16:39:56] drwx------. 5 boincer umatlas      4096 Nov 26 14:30 pilot3
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:54 boinc_task_state.xml
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas 921502175 Nov 27 16:36 HITS.47483661._002464.pool.root.1
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas      1064 Nov 27 16:38 memory_monitor_summary.json
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:38 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas   2569714 Nov 27 16:38 log.47483661._002464.job.log.tgz.1
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas        95 Nov 27 16:39 pilot_heartbeat.json
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas      8622 Nov 27 16:39 heartbeat.json
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 16:39 init_data.xml
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas       823 Nov 27 16:39 pilotlog.txt
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas        29 Nov 27 16:39 wrapper_checkpoint.txt
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:39 boinc_mmap_file
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas  12240510 Nov 27 16:39 log.47483661._002464.job.log.1
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas       353 Nov 27 16:39 output.list
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:39 runtime_log
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas  14827520 Nov 27 16:39 result.tar.gz
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 16:39 runtime_log.err
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas       665 Nov 27 16:39 mnDNDmctUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTArMDmsjeGNo.diag
[2025-11-27 16:39:56] -rw-r--r--. 1 boincer umatlas     21816 Nov 27 16:39 stderr.txt
[2025-11-27 16:39:56] HITS file was successfully produced:
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas 921502175 Nov 27 16:36 shared/HITS.pool.root.1
[2025-11-27 16:39:56]  *** Contents of shared directory: ***
[2025-11-27 16:39:56] total 1316036
[2025-11-27 16:39:56] -rw-r--r--. 2 boincer umatlas 410665357 Nov 26 14:29 ATLAS.root_0
[2025-11-27 16:39:56] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 14:29 start_atlas.sh
[2025-11-27 16:39:56] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 14:29 input.tar.gz
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas 921502175 Nov 27 16:36 HITS.pool.root.1
[2025-11-27 16:39:56] -rw-------. 1 boincer umatlas  14827520 Nov 27 16:39 result.tar.gz
16:39:58 (1723768): run_atlas exited; CPU time 218383.978965
16:39:58 (1723768): called boinc_finish(0)

</stderr_txt>
]]>

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