Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:15:15 (3747706): wrapper (7.7.26015): starting
00:15:15 (3747706): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:15:15] Arguments: --nthreads 12
[2025-11-27 00:15:15] Threads: 12
[2025-11-27 00:15:15] Checking for CVMFS
[2025-11-27 00:15:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:15:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:15:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:15:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:15:17] 2.13.2.0 7688 33917 182152 153348 2 57 34000314 39288833 7116 16776704 0 25366721 99.615 26773571 37303 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:15:17] CVMFS is ok
[2025-11-27 00:15:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:15:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:15:17] Further information can be found at the LHC@home message board.
[2025-11-27 00:15:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:15:17] Checking for apptainer binary...
[2025-11-27 00:15:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:15:17] Running /usr/bin/apptainer --version
[2025-11-27 00:15:17] apptainer version 1.4.4-1.el9
[2025-11-27 00:15:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:15:17] c-210-1.aglt2.org
[2025-11-27 00:15:17] apptainer works
[2025-11-27 00:15:17] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:15:17] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:15:17] Starting ATLAS job with PandaID=6891105268
[2025-11-27 00:15:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:24:51]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:24:51] 2025-11-28 06:23:47,972 | INFO     | monitor loop #5766: job 0:6891105268 is in state 'finished'
[2025-11-28 01:24:51] 2025-11-28 06:23:47,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:24:51] 2025-11-28 06:23:48,405 | INFO     | time since job start (90467s) is within the limit (172800.0s)
[2025-11-28 01:24:51] 2025-11-28 06:23:50,441 | INFO     | time since job start (90469s) is within the limit (172800.0s)
[2025-11-28 01:24:51] 2025-11-28 06:23:50,477 | INFO     | monitor loop #5767: job 0:6891105268 is in state 'finished'
[2025-11-28 01:24:51] 2025-11-28 06:23:50,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:24:51] 2025-11-28 06:23:52,451 | INFO     | time since job start (90471s) is within the limit (172800.0s)
[2025-11-28 01:24:51] 2025-11-28 06:23:53,012 | INFO     | monitor loop #5768: job 0:6891105268 is in state 'finished'
[2025-11-28 01:24:51] 2025-11-28 06:23:53,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:24:51] 2025-11-28 06:23:54,249 | INFO     | PID=3751730 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:24:51] 2025-11-28 06:23:54,249 | INFO     | .. there are 8 such processes running
[2025-11-28 01:24:51] 2025-11-28 06:23:55,250 | INFO     | time since job start (90474s) is within the limit (172800.0s)
[2025-11-28 01:24:51] 2025-11-28 06:23:55,526 | INFO     | monitor loop #5769: job 0:6891105268 is in state 'finished'
[2025-11-28 01:24:51] 2025-11-28 06:23:55,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,119 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 01:24:51] 2025-11-28 06:23:57,140 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8630000000003
[2025-11-28 01:24:51] 2025-11-28 06:23:57,151 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6891105268/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,160 | INFO     | extracted standard info from prmon json
[2025-11-28 01:24:51] 2025-11-28 06:23:57,160 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:24:51] 2025-11-28 06:23:57,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:24:51] 2025-11-28 06:23:57,236 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:24:51] 2025-11-28 06:23:57,239 | INFO     | sum of square deviations: 1009247744127.7546
[2025-11-28 01:24:51] 2025-11-28 06:23:57,280 | INFO     | time since job start (90476s) is within the limit (172800.0s)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,433 | INFO     | sum of deviations: 5339923929943.608
[2025-11-28 01:24:51] 2025-11-28 06:23:57,433 | INFO     | mean x: 1764265818.5674763
[2025-11-28 01:24:51] 2025-11-28 06:23:57,433 | INFO     | mean y: 3561744.2240215926
[2025-11-28 01:24:51] 2025-11-28 06:23:57,433 | INFO     | intersect: -9331158415.583897
[2025-11-28 01:24:51] 2025-11-28 06:23:57,441 | INFO     | chi2: 23.009912006978755
[2025-11-28 01:24:51] 2025-11-28 06:23:57,458 | INFO     | sum of square deviations: 999068359132.2499
[2025-11-28 01:24:51] 2025-11-28 06:23:57,517 | INFO     | sum of deviations: 6002518843357.146
[2025-11-28 01:24:51] 2025-11-28 06:23:57,517 | INFO     | mean x: 1764265666.0812457
[2025-11-28 01:24:51] 2025-11-28 06:23:57,517 | INFO     | mean y: 3571668.9654705483
[2025-11-28 01:24:51] 2025-11-28 06:23:57,517 | INFO     | intersect: -10596341548.723457
[2025-11-28 01:24:51] 2025-11-28 06:23:57,519 | INFO     | chi2: 19.208455274965193
[2025-11-28 01:24:51] 2025-11-28 06:23:57,520 | INFO     | current chi2=19.208455274965193 (change=16.520952930461473 %)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,520 | INFO     | right removable region: 1476
[2025-11-28 01:24:51] 2025-11-28 06:23:57,522 | INFO     | sum of square deviations: 999064682052.25
[2025-11-28 01:24:51] 2025-11-28 06:23:57,577 | INFO     | sum of deviations: 4623675988629.186
[2025-11-28 01:24:51] 2025-11-28 06:23:57,577 | INFO     | mean x: 1764265971.0812457
[2025-11-28 01:24:51] 2025-11-28 06:23:57,577 | INFO     | mean y: 3572470.2234258633
[2025-11-28 01:24:51] 2025-11-28 06:23:57,577 | INFO     | intersect: -8161458637.959904
[2025-11-28 01:24:51] 2025-11-28 06:23:57,579 | INFO     | chi2: 19.193723638019314
[2025-11-28 01:24:51] 2025-11-28 06:23:57,580 | INFO     | current chi2=19.193723638019314 (change=16.584975934727677 %)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,580 | INFO     | left removable region: 10
[2025-11-28 01:24:51] 2025-11-28 06:23:57,582 | INFO     | sum of square deviations: 976907850880.1533
[2025-11-28 01:24:51] 2025-11-28 06:23:57,633 | INFO     | sum of deviations: 4920708861351.184
[2025-11-28 01:24:51] 2025-11-28 06:23:57,633 | INFO     | mean x: 1764265940.611869
[2025-11-28 01:24:51] 2025-11-28 06:23:57,633 | INFO     | mean y: 3591913.977489768
[2025-11-28 01:24:51] 2025-11-28 06:23:57,634 | INFO     | intersect: -8883059001.896807
[2025-11-28 01:24:51] 2025-11-28 06:23:57,636 | INFO     | chi2: 12.995474568116375
[2025-11-28 01:24:51] 2025-11-28 06:23:57,636 | INFO     | current memory leak: 5.04 B/s (using 1466 data points, chi2=13.00)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,637 | INFO     | could have reported an average CPU frequency of 2599 MHz (53 samples)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | ..............................
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | . Timing measurements:
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | . get job = 0 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | . initial setup = 4 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | . payload setup = 23 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | . stage-in = 0 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,638 | INFO     | . payload execution = 90377 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,639 | INFO     | . stage-out = 5 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,639 | INFO     | . log creation = 1 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,639 | INFO     | ..............................
[2025-11-28 01:24:51] 2025-11-28 06:23:57,787 | INFO     | 
[2025-11-28 01:24:51] 2025-11-28 06:23:57,788 | INFO     | job summary report
[2025-11-28 01:24:51] 2025-11-28 06:23:57,792 | INFO     | --------------------------------------------------
[2025-11-28 01:24:51] 2025-11-28 06:23:57,792 | INFO     | PanDA job id: 6891105268
[2025-11-28 01:24:51] 2025-11-28 06:23:57,792 | INFO     | task id: 47483661
[2025-11-28 01:24:51] 2025-11-28 06:23:57,792 | INFO     | errors: (none)
[2025-11-28 01:24:51] 2025-11-28 06:23:57,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:24:51] 2025-11-28 06:23:57,792 | INFO     | pilot state: finished 
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | transexitcode: 0
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | exeerrorcode: 0
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | exeerrordiag: 
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | exitcode: 0
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | exitmsg: OK
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | cpuconsumptiontime: 310078 s
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | nevents: 1000
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | neventsw: 0
[2025-11-28 01:24:51] 2025-11-28 06:23:57,793 | INFO     | pid: 3760578
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | pgrp: 3760578
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | corecount: 12
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | event service: False
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 18: 2284622, 23: 2284650, 90405: 2352874, 90412: 2361896, 90415: 2361952, 90436: 2362294}
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | --------------------------------------------------
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | 
[2025-11-28 01:24:51] 2025-11-28 06:23:57,794 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 01:24:51] 2025-11-28 06:23:58,040 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:24:51] 2025-11-28 06:23:58,047 | INFO     | job 6891105268 has completed (purged errors)
[2025-11-28 01:24:51] 2025-11-28 06:23:58,047 | INFO     | overall cleanup function is called
[2025-11-28 01:24:51] 2025-11-28 06:23:59,073 | INFO     | --- collectZombieJob: --- 10, [3760578]
[2025-11-28 01:24:51] 2025-11-28 06:23:59,073 | INFO     | zombie collector waiting for pid 3760578
[2025-11-28 01:24:51] 2025-11-28 06:23:59,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:24:51] 2025-11-28 06:23:59,073 | INFO     | collected zombie processes
[2025-11-28 01:24:51] 2025-11-28 06:23:59,073 | INFO     | will attempt to kill all subprocesses of pid=3760578
[2025-11-28 01:24:51] 2025-11-28 06:23:59,652 | INFO     | process IDs to be killed: [3760578] (in reverse order)
[2025-11-28 01:24:51] 2025-11-28 06:23:59,770 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:24:51] 2025-11-28 06:23:59,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:24:51] 2025-11-28 06:23:59,790 | INFO     | did not find any defunct processes belonging to 3760578
[2025-11-28 01:24:51] 2025-11-28 06:23:59,804 | INFO     | did not find any defunct processes belonging to 3760578
[2025-11-28 01:24:51] 2025-11-28 06:23:59,813 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:24:51] 2025-11-28 06:23:59,814 | INFO     | ready for new job
[2025-11-28 01:24:51] 2025-11-28 06:23:59,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:24:51] 2025-11-28 06:23:59,825 | INFO     | ***************************************
[2025-11-28 01:24:51] 2025-11-28 06:23:59,825 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:24:51] 2025-11-28 06:23:59,825 | INFO     | ***************************************
[2025-11-28 01:24:51] 2025-11-28 06:23:59,825 | INFO     | 
[2025-11-28 01:24:51] 2025-11-28 06:23:59,827 | INFO     | architecture information:
[2025-11-28 01:24:51] 2025-11-28 06:23:59,828 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:24:51] 2025-11-28 06:23:59,985 | INFO     | cat /etc/os-release:
[2025-11-28 01:24:51] NAME="CentOS Linux"
[2025-11-28 01:24:51] VERSION="7 (Core)"
[2025-11-28 01:24:51] ID="centos"
[2025-11-28 01:24:51] ID_LIKE="rhel fedora"
[2025-11-28 01:24:51] VERSION_ID="7"
[2025-11-28 01:24:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:24:51] ANSI_COLOR="0;31"
[2025-11-28 01:24:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:24:51] HOME_URL="https://www.centos.org/"
[2025-11-28 01:24:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:24:51] 
[2025-11-28 01:24:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:24:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:24:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:24:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:24:51] 
[2025-11-28 01:24:51] 2025-11-28 06:23:59,985 | INFO     | ***************************************
[2025-11-28 01:24:51] 2025-11-28 06:24:00,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 01:24:51] 2025-11-28 06:24:00,533 | INFO     | sufficient remaining disk space (50250907648 B)
[2025-11-28 01:24:51] 2025-11-28 06:24:00,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:24:51] 2025-11-28 06:24:00,537 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:24:51] 2025-11-28 06:24:00,537 | INFO     | update_server=False
[2025-11-28 01:24:51] 2025-11-28 06:24:00,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:24:51] 2025-11-28 06:24:00,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:24:51] 2025-11-28 06:24:00,542 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 01:24:51] 2025-11-28 06:24:00,542 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 01:24:51] 2025-11-28 06:24:00,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:24:51] 2025-11-28 06:24:00,542 | INFO     | will abort loop
[2025-11-28 01:24:51] 2025-11-28 06:24:00,586 | INFO     | all job control threads have been joined
[2025-11-28 01:24:51] 2025-11-28 06:24:00,880 | INFO     | all data control threads have been joined
[2025-11-28 01:24:51] 2025-11-28 06:24:01,087 | INFO     | all payload control threads have been joined
[2025-11-28 01:24:51] 2025-11-28 06:24:01,543 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:01,548 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:01,592 | INFO     | [job] control thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:01,688 | INFO     | [job] validate thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:01,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:24:51] 2025-11-28 06:24:01,886 | INFO     | [data] control thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,006 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,031 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,093 | INFO     | [payload] control thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,211 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,275 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,547 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,597 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:02,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:24:51] 2025-11-28 06:24:02,986 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:03,828 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:05,863 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:24:51] 2025-11-28 06:24:30,755 | INFO     | PID=3751730 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:24:51] 2025-11-28 06:24:30,756 | INFO     | .. there are 8 such processes running
[2025-11-28 01:24:51] 2025-11-28 06:24:30,756 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:24:51] 2025-11-28 06:24:30,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:24:51] 2025-11-28 06:24:30,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:24:51] 2025-11-28 06:24:45,262 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:24:51] 2025-11-28 06:24:45,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232236635968)>', '<ExcThread(monitor, started 140231755953920)>']
[2025-11-28 01:24:51] 2025-11-28 06:24:45,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:24:51] 2025-11-28 06:24:45,848 | INFO     | [monitor] control thread has ended
[2025-11-28 01:24:51] 2025-11-28 06:24:50,470 | INFO     | all workflow threads have been joined
[2025-11-28 01:24:51] 2025-11-28 06:24:50,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:24:51] 2025-11-28 06:24:50,471 | INFO     | traces error code: 0
[2025-11-28 01:24:51] 2025-11-28 06:24:50,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:24:51] 2025-11-28 06:24:50,878 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:24:51] 2025-11-28 06:24:50,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:24:51] 2025-11-28 06:24:50,913 [wrapper] pilotpid: 3751730
[2025-11-28 01:24:51] 2025-11-28 06:24:50,929 [wrapper] Pilot exit status: 0
[2025-11-28 01:24:51] 2025-11-28 06:24:51,038 [wrapper] pandaids: 6891105268
[2025-11-28 01:24:51] 2025-11-28 06:24:51,303 [wrapper] cleanup supervisor_pilot 2191652 3751731
[2025-11-28 01:24:51] 2025-11-28 06:24:51,306 [wrapper] Test setup, not cleaning
[2025-11-28 01:24:51] 2025-11-28 06:24:51,309 [wrapper] apfmon messages muted
[2025-11-28 01:24:51] 2025-11-28 06:24:51,311 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:24:51] 2025-11-28 06:24:51,313 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:24:51]  *** Error codes and diagnostics ***
[2025-11-28 01:24:51]     "exeErrorCode": 0,
[2025-11-28 01:24:51]     "exeErrorDiag": "",
[2025-11-28 01:24:51]     "pilotErrorCode": 0,
[2025-11-28 01:24:51]     "pilotErrorDiag": "",
[2025-11-28 01:24:51]  *** Listing of results directory ***
[2025-11-28 01:24:51] total 1326228
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-28 01:24:51] -rwx------. 1 boincer umatlas     36292 Nov 18 01:59 runpilot2-wrapper.sh
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:24:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:15 run_atlas
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:15 job.xml
[2025-11-28 01:24:51] -rw-r--r--. 2 boincer umatlas 407808290 Nov 27 00:15 EVNT.47483658._000240.pool.root.1
[2025-11-28 01:24:51] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:15 start_atlas.sh
[2025-11-28 01:24:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:15 shared
[2025-11-28 01:24:51] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:15 input.tar.gz
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:15 boinc_lockfile
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 00:15 pandaJob.out
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas    991570 Nov 27 00:15 agis_schedconf.cvmfs.json
[2025-11-28 01:24:51] drwx------. 5 boincer umatlas      4096 Nov 27 00:16 pilot3
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas       533 Nov 28 00:51 boinc_task_state.xml
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas      6662 Nov 28 01:20 init_data.xml
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas 916607327 Nov 28 01:22 HITS.47483661._002100.pool.root.1
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas      1057 Nov 28 01:23 memory_monitor_summary.json
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas   1516240 Nov 28 01:23 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas   2973257 Nov 28 01:23 log.47483661._002100.job.log.tgz.1
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas        95 Nov 28 01:23 pilot_heartbeat.json
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas      8622 Nov 28 01:23 heartbeat.json
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas      5009 Nov 28 01:24 pilotlog.txt
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas        29 Nov 28 01:24 wrapper_checkpoint.txt
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 01:24 boinc_mmap_file
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas  11887999 Nov 28 01:24 log.47483661._002100.job.log.1
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas       353 Nov 28 01:24 output.list
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas       620 Nov 28 01:24 runtime_log
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas  14878720 Nov 28 01:24 result.tar.gz
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas      8701 Nov 28 01:24 runtime_log.err
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas       659 Nov 28 01:24 pRbMDmfrUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxOKODmz3LvQo.diag
[2025-11-28 01:24:51] -rw-r--r--. 1 boincer umatlas     21840 Nov 28 01:24 stderr.txt
[2025-11-28 01:24:51] HITS file was successfully produced:
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas 916607327 Nov 28 01:22 shared/HITS.pool.root.1
[2025-11-28 01:24:51]  *** Contents of shared directory: ***
[2025-11-28 01:24:51] total 1308516
[2025-11-28 01:24:51] -rw-r--r--. 2 boincer umatlas 407808290 Nov 27 00:15 ATLAS.root_0
[2025-11-28 01:24:51] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:15 start_atlas.sh
[2025-11-28 01:24:51] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:15 input.tar.gz
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas 916607327 Nov 28 01:22 HITS.pool.root.1
[2025-11-28 01:24:51] -rw-------. 1 boincer umatlas  14878720 Nov 28 01:24 result.tar.gz
01:24:52 (3747706): run_atlas exited; CPU time 310436.757139
01:24:52 (3747706): called boinc_finish(0)

</stderr_txt>
]]>

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