Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:52 (2211620): wrapper (7.7.26015): starting
00:04:52 (2211620): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:52] Arguments: --nthreads 9
[2025-11-26 00:04:52] Threads: 9
[2025-11-26 00:04:52] Checking for CVMFS
[2025-11-26 00:04:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:54] 2.13.2.0 6699 35394 233408 153309 3 286 34295656 40960000 21096 16776704 0 91848683 99.614 92157175 37458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:54] CVMFS is ok
[2025-11-26 00:04:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:54] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:54] Checking for apptainer binary...
[2025-11-26 00:04:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:54] Running /usr/bin/apptainer --version
[2025-11-26 00:04:54] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:55] c-212-4.aglt2.org
[2025-11-26 00:04:55] apptainer works
[2025-11-26 00:04:55] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:55] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:55] Starting ATLAS job with PandaID=6891568711
[2025-11-26 00:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:22:05]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:22:05] 2025-11-27 01:21:08,955 | INFO     | sum of square deviations: 527678245836.1612
[2025-11-26 20:22:05] 2025-11-27 01:21:09,031 | INFO     | sum of deviations: 3791968912529.6196
[2025-11-26 20:22:05] 2025-11-27 01:21:09,032 | INFO     | mean x: 1764169979.5728643
[2025-11-26 20:22:05] 2025-11-27 01:21:09,032 | INFO     | mean y: 3012198.975711893
[2025-11-26 20:22:05] 2025-11-27 01:21:09,032 | INFO     | intersect: -12674557459.70488
[2025-11-26 20:22:05] 2025-11-27 01:21:09,033 | INFO     | chi2: 11.338523913134232
[2025-11-26 20:22:05] 2025-11-27 01:21:09,035 | INFO     | sum of square deviations: 521076834399.45026
[2025-11-26 20:22:05] 2025-11-27 01:21:09,102 | INFO     | sum of deviations: 4198055506505.4575
[2025-11-26 20:22:05] 2025-11-27 01:21:09,102 | INFO     | mean x: 1764169827.0941968
[2025-11-26 20:22:05] 2025-11-27 01:21:09,103 | INFO     | mean y: 3021579.8351555928
[2025-11-26 20:22:05] 2025-11-27 01:21:09,107 | INFO     | intersect: -14210012598.855991
[2025-11-26 20:22:05] 2025-11-27 01:21:09,108 | INFO     | chi2: 8.23487708747592
[2025-11-26 20:22:05] 2025-11-27 01:21:09,108 | INFO     | current chi2=8.23487708747592 (change=27.372582616888362 %)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,110 | INFO     | sum of square deviations: 514530726324.1481
[2025-11-26 20:22:05] 2025-11-27 01:21:09,191 | INFO     | sum of deviations: 4670516284432.485
[2025-11-26 20:22:05] 2025-11-27 01:21:09,191 | INFO     | mean x: 1764169674.6157095
[2025-11-26 20:22:05] 2025-11-27 01:21:09,191 | INFO     | mean y: 3032583.748310811
[2025-11-26 20:22:05] 2025-11-27 01:21:09,191 | INFO     | intersect: -16010750019.01076
[2025-11-26 20:22:05] 2025-11-27 01:21:09,193 | INFO     | chi2: 4.275211376421849
[2025-11-26 20:22:05] 2025-11-27 01:21:09,193 | INFO     | current chi2=4.275211376421849 (change=48.084090011205646 %)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,210 | INFO     | sum of square deviations: 508039689047.74097
[2025-11-26 20:22:05] 2025-11-27 01:21:09,260 | INFO     | sum of deviations: 4882838524862.908
[2025-11-26 20:22:05] 2025-11-27 01:21:09,260 | INFO     | mean x: 1764169522.1374047
[2025-11-26 20:22:05] 2025-11-27 01:21:09,260 | INFO     | mean y: 3037568.475826972
[2025-11-26 20:22:05] 2025-11-27 01:21:09,261 | INFO     | intersect: -16952635566.48672
[2025-11-26 20:22:05] 2025-11-27 01:21:09,266 | INFO     | chi2: 3.2047620854226766
[2025-11-26 20:22:05] 2025-11-27 01:21:09,266 | INFO     | current chi2=3.2047620854226766 (change=25.038511473439428 %)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,267 | INFO     | sum of square deviations: 501603346310.3474
[2025-11-26 20:22:05] 2025-11-27 01:21:09,320 | INFO     | sum of deviations: 5014965244377.982
[2025-11-26 20:22:05] 2025-11-27 01:21:09,321 | INFO     | mean x: 1764169369.6575809
[2025-11-26 20:22:05] 2025-11-27 01:21:09,321 | INFO     | mean y: 3040698.0919931857
[2025-11-26 20:22:05] 2025-11-27 01:21:09,321 | INFO     | intersect: -17634896008.48471
[2025-11-26 20:22:05] 2025-11-27 01:21:09,322 | INFO     | chi2: 2.688901666369316
[2025-11-26 20:22:05] 2025-11-27 01:21:09,322 | INFO     | current chi2=2.688901666369316 (change=16.09668378816094 %)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,322 | INFO     | right removable region: 1173
[2025-11-26 20:22:05] 2025-11-27 01:21:09,327 | INFO     | sum of square deviations: 521073212228.637
[2025-11-26 20:22:05] 2025-11-27 01:21:09,366 | INFO     | sum of deviations: 3436834872730.382
[2025-11-26 20:22:05] 2025-11-27 01:21:09,367 | INFO     | mean x: 1764170132.0933557
[2025-11-26 20:22:05] 2025-11-27 01:21:09,367 | INFO     | mean y: 3020391.528174937
[2025-11-26 20:22:05] 2025-11-27 01:21:09,367 | INFO     | intersect: -11632890434.65993
[2025-11-26 20:22:05] 2025-11-27 01:21:09,368 | INFO     | chi2: 9.076002381920583
[2025-11-26 20:22:05] 2025-11-27 01:21:09,368 | INFO     | current chi2=9.076002381920583 (change=19.95428636520144 %)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,368 | INFO     | left removable region: 10
[2025-11-26 20:22:05] 2025-11-27 01:21:09,369 | INFO     | sum of square deviations: 487629273945.47095
[2025-11-26 20:22:05] 2025-11-27 01:21:09,381 | INFO     | time since job start (72944s) is within the limit (172800.0s)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,410 | INFO     | sum of deviations: 4560155279863.945
[2025-11-26 20:22:05] 2025-11-27 01:21:09,411 | INFO     | mean x: 1764169644.1934652
[2025-11-26 20:22:05] 2025-11-27 01:21:09,411 | INFO     | mean y: 3052455.3602751503
[2025-11-26 20:22:05] 2025-11-27 01:21:09,411 | INFO     | intersect: -16494906029.478651
[2025-11-26 20:22:05] 2025-11-27 01:21:09,412 | INFO     | chi2: 0.23810781216876709
[2025-11-26 20:22:05] 2025-11-27 01:21:09,413 | INFO     | current memory leak: 9.35 B/s (using 1163 data points, chi2=0.24)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | could have reported an average CPU frequency of 3103 MHz (43 samples)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | ..............................
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | . Timing measurements:
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | . get job = 0 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | . initial setup = 3 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | . payload setup = 13 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,414 | INFO     | . stage-in = 0 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,415 | INFO     | . payload execution = 72842 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,415 | INFO     | . stage-out = 17 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,415 | INFO     | . log creation = 8 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,415 | INFO     | ..............................
[2025-11-26 20:22:05] 2025-11-27 01:21:09,560 | INFO     | 
[2025-11-26 20:22:05] 2025-11-27 01:21:09,565 | INFO     | job summary report
[2025-11-26 20:22:05] 2025-11-27 01:21:09,565 | INFO     | --------------------------------------------------
[2025-11-26 20:22:05] 2025-11-27 01:21:09,565 | INFO     | PanDA job id: 6891568711
[2025-11-26 20:22:05] 2025-11-27 01:21:09,565 | INFO     | task id: 47493068
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | errors: (none)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | pilot state: finished 
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | transexitcode: 0
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | exeerrorcode: 0
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | exeerrordiag: 
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | exitcode: 0
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | exitmsg: OK
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | cpuconsumptiontime: 204334 s
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | nevents: 1000
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | neventsw: 0
[2025-11-26 20:22:05] 2025-11-27 01:21:09,566 | INFO     | pid: 2250864
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | pgrp: 2250864
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | corecount: 9
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | event service: False
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | sizes: {0: 2284304, 11: 2284304, 16: 2284594, 22: 2284622, 72861: 2343407, 72862: 2343406, 72879: 2352584, 72883: 2352640, 72904: 2352886}
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | --------------------------------------------------
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | 
[2025-11-26 20:22:05] 2025-11-27 01:21:09,567 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 20:22:05] 2025-11-27 01:21:09,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | job 6891568711 has completed (purged errors)
[2025-11-26 20:22:05] 2025-11-27 01:21:09,683 | INFO     | overall cleanup function is called
[2025-11-26 20:22:05] 2025-11-27 01:21:10,714 | INFO     | --- collectZombieJob: --- 10, [2250864]
[2025-11-26 20:22:05] 2025-11-27 01:21:10,714 | INFO     | zombie collector waiting for pid 2250864
[2025-11-26 20:22:05] 2025-11-27 01:21:10,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:22:05] 2025-11-27 01:21:10,715 | INFO     | collected zombie processes
[2025-11-26 20:22:05] 2025-11-27 01:21:10,715 | INFO     | will attempt to kill all subprocesses of pid=2250864
[2025-11-26 20:22:05] 2025-11-27 01:21:11,533 | INFO     | process IDs to be killed: [2250864] (in reverse order)
[2025-11-26 20:22:05] 2025-11-27 01:21:12,054 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:22:05] 2025-11-27 01:21:12,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:22:05] 2025-11-27 01:21:12,210 | INFO     | did not find any defunct processes belonging to 2250864
[2025-11-26 20:22:05] 2025-11-27 01:21:12,244 | INFO     | did not find any defunct processes belonging to 2250864
[2025-11-26 20:22:05] 2025-11-27 01:21:12,252 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:22:05] 2025-11-27 01:21:12,252 | INFO     | ready for new job
[2025-11-26 20:22:05] 2025-11-27 01:21:12,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:22:05] 2025-11-27 01:21:12,282 | INFO     | ***************************************
[2025-11-26 20:22:05] 2025-11-27 01:21:12,282 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:22:05] 2025-11-27 01:21:12,282 | INFO     | ***************************************
[2025-11-26 20:22:05] 2025-11-27 01:21:12,283 | INFO     | 
[2025-11-26 20:22:05] 2025-11-27 01:21:12,313 | INFO     | architecture information:
[2025-11-26 20:22:05] 2025-11-27 01:21:12,325 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:22:05] 2025-11-27 01:21:12,473 | INFO     | cat /etc/os-release:
[2025-11-26 20:22:05] NAME="CentOS Linux"
[2025-11-26 20:22:05] VERSION="7 (Core)"
[2025-11-26 20:22:05] ID="centos"
[2025-11-26 20:22:05] ID_LIKE="rhel fedora"
[2025-11-26 20:22:05] VERSION_ID="7"
[2025-11-26 20:22:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:22:05] ANSI_COLOR="0;31"
[2025-11-26 20:22:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:22:05] HOME_URL="https://www.centos.org/"
[2025-11-26 20:22:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:22:05] 
[2025-11-26 20:22:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:22:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:22:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:22:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:22:05] 
[2025-11-26 20:22:05] 2025-11-27 01:21:12,473 | INFO     | ***************************************
[2025-11-26 20:22:05] 2025-11-27 01:21:12,983 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 20:22:05] 2025-11-27 01:21:13,189 | INFO     | sufficient remaining disk space (122644594688 B)
[2025-11-26 20:22:05] 2025-11-27 01:21:13,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:22:05] 2025-11-27 01:21:13,190 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:22:05] 2025-11-27 01:21:13,190 | INFO     | update_server=False
[2025-11-26 20:22:05] 2025-11-27 01:21:13,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:22:05] 2025-11-27 01:21:13,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:22:05] 2025-11-27 01:21:13,489 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 20:22:05] 2025-11-27 01:21:13,489 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 20:22:05] 2025-11-27 01:21:13,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:22:05] 2025-11-27 01:21:13,489 | INFO     | will abort loop
[2025-11-26 20:22:05] 2025-11-27 01:21:13,894 | INFO     | all payload control threads have been joined
[2025-11-26 20:22:05] 2025-11-27 01:21:14,196 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,343 | INFO     | all data control threads have been joined
[2025-11-26 20:22:05] 2025-11-27 01:21:14,413 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,492 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,495 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:22:05] 2025-11-27 01:21:14,664 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,778 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,797 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:14,841 | INFO     | all job control threads have been joined
[2025-11-26 20:22:05] 2025-11-27 01:21:14,901 | INFO     | [payload] control thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:15,199 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:15,336 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:15,350 | INFO     | [data] control thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:15,601 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:15,651 | INFO     | [job] validate thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:15,848 | INFO     | [job] control thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:16,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:22:05] 2025-11-27 01:21:20,649 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:22:05] 2025-11-27 01:21:40,006 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:22:05] 2025-11-27 01:21:40,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497083877184)>', '<ExcThread(monitor, started 140496726894336)>']
[2025-11-26 20:22:05] 2025-11-27 01:21:45,674 | INFO     | all workflow threads have been joined
[2025-11-26 20:22:05] 2025-11-27 01:21:45,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:22:05] 2025-11-27 01:21:45,675 | INFO     | traces error code: 0
[2025-11-26 20:22:05] 2025-11-27 01:21:45,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:22:05] 2025-11-27 01:22:00,346 | INFO     | PID=2218704 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:22:05] 2025-11-27 01:22:00,346 | INFO     | .. there are 25 such processes running
[2025-11-26 20:22:05] 2025-11-27 01:22:00,347 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:22:05] 2025-11-27 01:22:00,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:22:05] 2025-11-27 01:22:00,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:22:05] 2025-11-27 01:22:00,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:22:05] 2025-11-27 01:22:00,447 | INFO     | [monitor] control thread has ended
[2025-11-26 20:22:05] 2025-11-27 01:22:04,130 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:22:05] 2025-11-27 01:22:04,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:22:05] 2025-11-27 01:22:04,195 [wrapper] pilotpid: 2218704
[2025-11-26 20:22:05] 2025-11-27 01:22:04,216 [wrapper] Pilot exit status: 0
[2025-11-26 20:22:05] 2025-11-27 01:22:04,427 [wrapper] pandaids: 6891568711
[2025-11-26 20:22:05] 2025-11-27 01:22:04,991 [wrapper] cleanup supervisor_pilot 2792043 2218705
[2025-11-26 20:22:05] 2025-11-27 01:22:05,026 [wrapper] Test setup, not cleaning
[2025-11-26 20:22:05] 2025-11-27 01:22:05,048 [wrapper] apfmon messages muted
[2025-11-26 20:22:05] 2025-11-27 01:22:05,068 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:22:05] 2025-11-27 01:22:05,104 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:22:05]  *** Error codes and diagnostics ***
[2025-11-26 20:22:05]     "exeErrorCode": 0,
[2025-11-26 20:22:05]     "exeErrorDiag": "",
[2025-11-26 20:22:05]     "pilotErrorCode": 0,
[2025-11-26 20:22:05]     "pilotErrorDiag": "",
[2025-11-26 20:22:05]  *** Listing of results directory ***
[2025-11-26 20:22:05] total 1317712
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-26 20:22:05] -rwx------. 1 boincer umatlas     36292 Nov 18 10:31 runpilot2-wrapper.sh
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:32 queuedata.json
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:22:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 20:22:05] -rw-r--r--. 2 boincer umatlas 409018382 Nov 26 00:04 EVNT.47493065._000192.pool.root.1
[2025-11-26 20:22:05] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-26 20:22:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 20:22:05] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:04 input.tar.gz
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 20:22:05] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas       533 Nov 26 19:55 boinc_task_state.xml
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas      6947 Nov 26 20:19 init_data.xml
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas 913896297 Nov 26 20:19 HITS.47493068._001919.pool.root.1
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas      1070 Nov 26 20:20 memory_monitor_summary.json
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas   2371498 Nov 26 20:20 log.47493068._001919.job.log.tgz.1
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas      8628 Nov 26 20:21 heartbeat.json
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas        96 Nov 26 20:22 pilot_heartbeat.json
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas       823 Nov 26 20:22 pilotlog.txt
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:22 boinc_mmap_file
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:22 wrapper_checkpoint.txt
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas   8879179 Nov 26 20:22 log.47493068._001919.job.log.1
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas       353 Nov 26 20:22 output.list
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:22 runtime_log
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas  11274240 Nov 26 20:22 result.tar.gz
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas      8699 Nov 26 20:22 runtime_log.err
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas       664 Nov 26 20:22 4IcKDmYrcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOUFKDm45cozn.diag
[2025-11-26 20:22:05] -rw-r--r--. 1 boincer umatlas     21208 Nov 26 20:22 stderr.txt
[2025-11-26 20:22:05] HITS file was successfully produced:
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas 913896297 Nov 26 20:19 shared/HITS.pool.root.1
[2025-11-26 20:22:05]  *** Contents of shared directory: ***
[2025-11-26 20:22:05] total 1303532
[2025-11-26 20:22:05] -rw-r--r--. 2 boincer umatlas 409018382 Nov 26 00:04 ATLAS.root_0
[2025-11-26 20:22:05] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-26 20:22:05] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:04 input.tar.gz
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas 913896297 Nov 26 20:19 HITS.pool.root.1
[2025-11-26 20:22:05] -rw-------. 1 boincer umatlas  11274240 Nov 26 20:22 result.tar.gz
20:22:06 (2211620): run_atlas exited; CPU time 205044.579272
20:22:06 (2211620): called boinc_finish(0)

</stderr_txt>
]]>

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