Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:00 (3299904): wrapper (7.7.26015): starting
00:05:00 (3299904): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:05:00] Arguments: --nthreads 9
[2025-11-26 00:05:00] Threads: 9
[2025-11-26 00:05:00] Checking for CVMFS
[2025-11-26 00:05:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:05:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:05:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:05:01] 2.13.2.0 6969 36269 242840 153309 0 546 32015462 40960000 23958 16776704 0 104144742 99.616 94197801 35788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:05:01] CVMFS is ok
[2025-11-26 00:05:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:05:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:05:02] Further information can be found at the LHC@home message board.
[2025-11-26 00:05:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:05:02] Checking for apptainer binary...
[2025-11-26 00:05:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:05:02] Running /usr/bin/apptainer --version
[2025-11-26 00:05:02] apptainer version 1.4.4-1.el9
[2025-11-26 00:05:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:05:02] c-212-14.aglt2.org
[2025-11-26 00:05:02] apptainer works
[2025-11-26 00:05:02] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:05:02] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:05:02] Starting ATLAS job with PandaID=6891568709
[2025-11-26 00:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:47:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:47:49] 2025-11-27 15:46:20,892 | INFO     | this job has now completed (state=finished)
[2025-11-27 10:47:49] 2025-11-27 15:46:20,892 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 10:47:49] 2025-11-27 15:46:20,892 | INFO     | log transfer has been attempted: DONE
[2025-11-27 10:47:49] 2025-11-27 15:46:20,892 | INFO     | job 6891568709 has finished - writing final server update
[2025-11-27 10:47:49] 2025-11-27 15:46:20,893 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 10:47:49] 2025-11-27 15:46:20,893 | INFO     | executing command: lscpu
[2025-11-27 10:47:49] 2025-11-27 15:46:20,963 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 10:47:49] 2025-11-27 15:46:21,713 | INFO     | time since job start (124850s) is within the limit (172800.0s)
[2025-11-27 10:47:49] 2025-11-27 15:46:22,295 | INFO     | monitor loop #7296: job 0:6891568709 is in state 'finished'
[2025-11-27 10:47:49] 2025-11-27 15:46:22,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:47:49] 2025-11-27 15:46:23,718 | INFO     | time since job start (124852s) is within the limit (172800.0s)
[2025-11-27 10:47:49] 2025-11-27 15:46:24,800 | INFO     | monitor loop #7297: job 0:6891568709 is in state 'finished'
[2025-11-27 10:47:49] 2025-11-27 15:46:24,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:47:49] 2025-11-27 15:46:25,725 | INFO     | time since job start (124854s) is within the limit (172800.0s)
[2025-11-27 10:47:49] 2025-11-27 15:46:27,305 | INFO     | monitor loop #7298: job 0:6891568709 is in state 'finished'
[2025-11-27 10:47:49] 2025-11-27 15:46:27,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:47:49] 2025-11-27 15:46:27,734 | INFO     | time since job start (124856s) is within the limit (172800.0s)
[2025-11-27 10:47:49] 2025-11-27 15:46:27,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 10:47:49] 2025-11-27 15:46:27,773 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3106.4851041666648
[2025-11-27 10:47:49] 2025-11-27 15:46:27,787 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891568709/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:47:49] 2025-11-27 15:46:27,788 | INFO     | extracted standard info from prmon json
[2025-11-27 10:47:49] 2025-11-27 15:46:27,788 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:47:49] 2025-11-27 15:46:27,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:47:49] 2025-11-27 15:46:27,813 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:47:49] 2025-11-27 15:46:27,815 | INFO     | sum of square deviations: 2655807709245.18
[2025-11-27 10:47:49] 2025-11-27 15:46:27,900 | INFO     | sum of deviations: 19522846649332.2
[2025-11-27 10:47:49] 2025-11-27 15:46:27,900 | INFO     | mean x: 1764195962.8553274
[2025-11-27 10:47:49] 2025-11-27 15:46:27,900 | INFO     | mean y: 2927529.267350929
[2025-11-27 10:47:49] 2025-11-27 15:46:27,901 | INFO     | intersect: -12965679769.483387
[2025-11-27 10:47:49] 2025-11-27 15:46:27,902 | INFO     | chi2: 21.30903079361231
[2025-11-27 10:47:49] 2025-11-27 15:46:27,904 | INFO     | sum of square deviations: 2636385428033.4707
[2025-11-27 10:47:49] 2025-11-27 15:46:27,984 | INFO     | sum of deviations: 20184982855226.207
[2025-11-27 10:47:49] 2025-11-27 15:46:27,984 | INFO     | mean x: 1764195810.3586478
[2025-11-27 10:47:49] 2025-11-27 15:46:27,984 | INFO     | mean y: 2932727.4791768743
[2025-11-27 10:47:49] 2025-11-27 15:46:27,985 | INFO     | intersect: -13504296453.31385
[2025-11-27 10:47:49] 2025-11-27 15:46:27,986 | INFO     | chi2: 18.320049104206845
[2025-11-27 10:47:49] 2025-11-27 15:46:27,986 | INFO     | current chi2=18.320049104206845 (change=14.0268307759049 %)
[2025-11-27 10:47:49] 2025-11-27 15:46:27,986 | INFO     | right removable region: 2040
[2025-11-27 10:47:49] 2025-11-27 15:46:27,988 | INFO     | sum of square deviations: 2636383736503.469
[2025-11-27 10:47:49] 2025-11-27 15:46:28,067 | INFO     | sum of deviations: 18732385083932.125
[2025-11-27 10:47:49] 2025-11-27 15:46:28,067 | INFO     | mean x: 1764196115.3586478
[2025-11-27 10:47:49] 2025-11-27 15:46:28,067 | INFO     | mean y: 2933734.648701617
[2025-11-27 10:47:49] 2025-11-27 15:46:28,067 | INFO     | intersect: -12532267624.279818
[2025-11-27 10:47:49] 2025-11-27 15:46:28,069 | INFO     | chi2: 17.58501644631875
[2025-11-27 10:47:49] 2025-11-27 15:46:28,069 | INFO     | current chi2=17.58501644631875 (change=17.476225846976977 %)
[2025-11-27 10:47:49] 2025-11-27 15:46:28,069 | INFO     | left removable region: 10
[2025-11-27 10:47:49] 2025-11-27 15:46:28,071 | INFO     | sum of square deviations: 2593986859543.556
[2025-11-27 10:47:49] 2025-11-27 15:46:28,154 | INFO     | sum of deviations: 18657265777240.16
[2025-11-27 10:47:49] 2025-11-27 15:46:28,155 | INFO     | mean x: 1764196084.86601
[2025-11-27 10:47:49] 2025-11-27 15:46:28,155 | INFO     | mean y: 2945190.8497536946
[2025-11-27 10:47:49] 2025-11-27 15:46:28,155 | INFO     | intersect: -12686045548.410774
[2025-11-27 10:47:49] 2025-11-27 15:46:28,156 | INFO     | chi2: 11.124389414278056
[2025-11-27 10:47:49] 2025-11-27 15:46:28,157 | INFO     | current memory leak: 7.19 B/s (using 2030 data points, chi2=11.12)
[2025-11-27 10:47:49] 2025-11-27 15:46:28,158 | INFO     | could have reported an average CPU frequency of 3061 MHz (72 samples)
[2025-11-27 10:47:49] 2025-11-27 15:46:28,158 | INFO     | ..............................
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . Timing measurements:
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . get job = 0 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . initial setup = 3 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . payload setup = 14 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . stage-in = 0 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . payload execution = 124792 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,159 | INFO     | . stage-out = 3 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,160 | INFO     | . log creation = 0 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,160 | INFO     | ..............................
[2025-11-27 10:47:49] 2025-11-27 15:46:28,244 | INFO     | 
[2025-11-27 10:47:49] 2025-11-27 15:46:28,253 | INFO     | job summary report
[2025-11-27 10:47:49] 2025-11-27 15:46:28,253 | INFO     | --------------------------------------------------
[2025-11-27 10:47:49] 2025-11-27 15:46:28,254 | INFO     | PanDA job id: 6891568709
[2025-11-27 10:47:49] 2025-11-27 15:46:28,254 | INFO     | task id: 47493068
[2025-11-27 10:47:49] 2025-11-27 15:46:28,254 | INFO     | errors: (none)
[2025-11-27 10:47:49] 2025-11-27 15:46:28,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:47:49] 2025-11-27 15:46:28,254 | INFO     | pilot state: finished 
[2025-11-27 10:47:49] 2025-11-27 15:46:28,254 | INFO     | transexitcode: 0
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | exeerrorcode: 0
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | exeerrordiag: 
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | exitcode: 0
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | exitmsg: OK
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | cpuconsumptiontime: 217730 s
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | nevents: 1000
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | neventsw: 0
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | pid: 3351159
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | pgrp: 3351159
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | corecount: 9
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | event service: False
[2025-11-27 10:47:49] 2025-11-27 15:46:28,255 | INFO     | sizes: {0: 2284304, 11: 2284304, 15: 2284594, 22: 2284622, 124809: 2366912, 124810: 2366911, 124814: 2376145, 124823: 2376335}
[2025-11-27 10:47:49] 2025-11-27 15:46:28,256 | INFO     | --------------------------------------------------
[2025-11-27 10:47:49] 2025-11-27 15:46:28,256 | INFO     | 
[2025-11-27 10:47:49] 2025-11-27 15:46:28,256 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 10:47:49] 2025-11-27 15:46:28,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:47:49] 2025-11-27 15:46:28,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:47:49] 2025-11-27 15:46:28,306 | INFO     | job 6891568709 has completed (purged errors)
[2025-11-27 10:47:49] 2025-11-27 15:46:28,306 | INFO     | overall cleanup function is called
[2025-11-27 10:47:49] 2025-11-27 15:46:29,324 | INFO     | --- collectZombieJob: --- 10, [3351159]
[2025-11-27 10:47:49] 2025-11-27 15:46:29,325 | INFO     | zombie collector waiting for pid 3351159
[2025-11-27 10:47:49] 2025-11-27 15:46:29,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:47:49] 2025-11-27 15:46:29,325 | INFO     | collected zombie processes
[2025-11-27 10:47:49] 2025-11-27 15:46:29,325 | INFO     | will attempt to kill all subprocesses of pid=3351159
[2025-11-27 10:47:49] 2025-11-27 15:46:29,886 | INFO     | process IDs to be killed: [3351159] (in reverse order)
[2025-11-27 10:47:49] 2025-11-27 15:46:30,023 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:47:49] 2025-11-27 15:46:30,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:47:49] 2025-11-27 15:46:30,042 | INFO     | did not find any defunct processes belonging to 3351159
[2025-11-27 10:47:49] 2025-11-27 15:46:30,060 | INFO     | did not find any defunct processes belonging to 3351159
[2025-11-27 10:47:49] 2025-11-27 15:46:30,061 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:47:49] 2025-11-27 15:46:30,062 | INFO     | ready for new job
[2025-11-27 10:47:49] 2025-11-27 15:46:30,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:47:49] 2025-11-27 15:46:30,071 | INFO     | ***************************************
[2025-11-27 10:47:49] 2025-11-27 15:46:30,071 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:47:49] 2025-11-27 15:46:30,071 | INFO     | ***************************************
[2025-11-27 10:47:49] 2025-11-27 15:46:30,071 | INFO     | 
[2025-11-27 10:47:49] 2025-11-27 15:46:30,076 | INFO     | architecture information:
[2025-11-27 10:47:49] 2025-11-27 15:46:30,077 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:47:49] 2025-11-27 15:46:30,098 | INFO     | cat /etc/os-release:
[2025-11-27 10:47:49] NAME="CentOS Linux"
[2025-11-27 10:47:49] VERSION="7 (Core)"
[2025-11-27 10:47:49] ID="centos"
[2025-11-27 10:47:49] ID_LIKE="rhel fedora"
[2025-11-27 10:47:49] VERSION_ID="7"
[2025-11-27 10:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:47:49] ANSI_COLOR="0;31"
[2025-11-27 10:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:47:49] HOME_URL="https://www.centos.org/"
[2025-11-27 10:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:47:49] 
[2025-11-27 10:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:47:49] 
[2025-11-27 10:47:49] 2025-11-27 15:46:30,098 | INFO     | ***************************************
[2025-11-27 10:47:49] 2025-11-27 15:46:30,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 10:47:49] 2025-11-27 15:46:30,620 | INFO     | sufficient remaining disk space (119102504960 B)
[2025-11-27 10:47:49] 2025-11-27 15:46:30,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:47:49] 2025-11-27 15:46:30,620 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:47:49] 2025-11-27 15:46:30,621 | INFO     | update_server=False
[2025-11-27 10:47:49] 2025-11-27 15:46:30,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:47:49] 2025-11-27 15:46:30,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:47:49] 2025-11-27 15:46:30,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:47:49] 2025-11-27 15:46:30,646 | INFO     | all data control threads have been joined
[2025-11-27 10:47:49] 2025-11-27 15:46:30,685 | INFO     | all job control threads have been joined
[2025-11-27 10:47:49] 2025-11-27 15:46:30,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:47:49] 2025-11-27 15:46:30,815 | INFO     | aborting loop
[2025-11-27 10:47:49] 2025-11-27 15:46:30,820 | INFO     | all payload control threads have been joined
[2025-11-27 10:47:49] 2025-11-27 15:46:31,627 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,651 | INFO     | [data] control thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,723 | INFO     | [job] control thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,820 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,828 | INFO     | [payload] control thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,838 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,935 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,942 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:31,970 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:32,260 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:32,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:32,286 | INFO     | [job] validate thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:32,630 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:32,953 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:33,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:47:49] 2025-11-27 15:46:34,263 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:46:34,631 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:47:49] 2025-11-27 15:47:01,299 | INFO     | PID=3317577 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:47:49] 2025-11-27 15:47:01,302 | INFO     | .. there are 23 such processes running
[2025-11-27 10:47:49] 2025-11-27 15:47:01,303 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:47:49] 2025-11-27 15:47:01,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:47:49] 2025-11-27 15:47:01,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:47:49] 2025-11-27 15:47:14,539 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:47:49] 2025-11-27 15:47:16,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962856302400)>', '<ExcThread(monitor, started 139961835710208)>']
[2025-11-27 10:47:49] 2025-11-27 15:47:16,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:47:49] 2025-11-27 15:47:16,387 | INFO     | [monitor] control thread has ended
[2025-11-27 10:47:49] 2025-11-27 15:47:21,107 | INFO     | all workflow threads have been joined
[2025-11-27 10:47:49] 2025-11-27 15:47:21,108 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:47:49] 2025-11-27 15:47:21,108 | INFO     | traces error code: 0
[2025-11-27 10:47:49] 2025-11-27 15:47:21,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:47:49] 2025-11-27 15:47:21,280 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:47:49] 2025-11-27 15:47:21,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:47:49] 2025-11-27 15:47:21,287 [wrapper] pilotpid: 3317577
[2025-11-27 10:47:49] 2025-11-27 15:47:21,290 [wrapper] Pilot exit status: 0
[2025-11-27 10:47:49] 2025-11-27 15:47:21,305 [wrapper] pandaids: 6891568709
[2025-11-27 10:47:49] 2025-11-27 15:47:21,395 [wrapper] cleanup supervisor_pilot 1783048 3317578
[2025-11-27 10:47:49] 2025-11-27 15:47:21,399 [wrapper] Test setup, not cleaning
[2025-11-27 10:47:49] 2025-11-27 15:47:21,403 [wrapper] apfmon messages muted
[2025-11-27 10:47:49] 2025-11-27 15:47:21,407 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:47:49] 2025-11-27 15:47:21,411 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:47:49]  *** Error codes and diagnostics ***
[2025-11-27 10:47:49]     "exeErrorCode": 0,
[2025-11-27 10:47:49]     "exeErrorDiag": "",
[2025-11-27 10:47:49]     "pilotErrorCode": 0,
[2025-11-27 10:47:49]     "pilotErrorDiag": "",
[2025-11-27 10:47:49]  *** Listing of results directory ***
[2025-11-27 10:47:49] total 1340660
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 10:47:49] -rwx------. 1 boincer umatlas     36292 Nov 18 10:31 runpilot2-wrapper.sh
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:32 queuedata.json
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:47:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 10:47:49] -rw-r--r--. 2 boincer umatlas 409018382 Nov 26 00:05 EVNT.47493065._000192.pool.root.1
[2025-11-27 10:47:49] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-27 10:47:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:05 shared
[2025-11-27 10:47:49] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:05 input.tar.gz
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:05 boinc_lockfile
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:05 pandaJob.out
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 10:47:49] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas      6950 Nov 27 10:36 init_data.xml
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas       533 Nov 27 10:38 boinc_task_state.xml
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas 923152986 Nov 27 10:45 HITS.47493068._001917.pool.root.1
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas      1065 Nov 27 10:46 memory_monitor_summary.json
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas   2976790 Nov 27 10:46 log.47493068._001917.job.log.tgz.1
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas      8613 Nov 27 10:46 heartbeat.json
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas        95 Nov 27 10:47 pilot_heartbeat.json
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas      4825 Nov 27 10:47 pilotlog.txt
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas  15394187 Nov 27 10:47 log.47493068._001917.job.log.1
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas       353 Nov 27 10:47 output.list
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:47 runtime_log
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas  18391040 Nov 27 10:47 result.tar.gz
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas      8705 Nov 27 10:47 runtime_log.err
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas       668 Nov 27 10:47 oeZKDmYrcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMUFKDmae6H2m.diag
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:47 wrapper_checkpoint.txt
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:47 boinc_mmap_file
[2025-11-27 10:47:49] -rw-r--r--. 1 boincer umatlas     21770 Nov 27 10:47 stderr.txt
[2025-11-27 10:47:49] HITS file was successfully produced:
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas 923152986 Nov 27 10:45 shared/HITS.pool.root.1
[2025-11-27 10:47:49]  *** Contents of shared directory: ***
[2025-11-27 10:47:49] total 1319520
[2025-11-27 10:47:49] -rw-r--r--. 2 boincer umatlas 409018382 Nov 26 00:05 ATLAS.root_0
[2025-11-27 10:47:49] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-27 10:47:49] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:05 input.tar.gz
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas 923152986 Nov 27 10:45 HITS.pool.root.1
[2025-11-27 10:47:49] -rw-------. 1 boincer umatlas  18391040 Nov 27 10:47 result.tar.gz
10:47:51 (3299904): run_atlas exited; CPU time 219570.967029
10:47:51 (3299904): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN