Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:53 (3497288): wrapper (7.7.26015): starting
00:04:53 (3497288): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 00:04:53] Arguments: --nthreads 12
[2025-11-26 00:04:53] Threads: 12
[2025-11-26 00:04:53] Checking for CVMFS
[2025-11-26 00:04:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:55] 2.13.2.0 12166 35398 277404 153309 1 100 33865186 40960001 21989 16776704 0 65223372 99.727 39435349 33641 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:55] CVMFS is ok
[2025-11-26 00:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:55] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:55] Checking for apptainer binary...
[2025-11-26 00:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:55] Running /usr/bin/apptainer --version
[2025-11-26 00:04:55] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:55] c-211-33-1.aglt2.org
[2025-11-26 00:04:55] apptainer works
[2025-11-26 00:04:55] Set ATHENA_PROC_NUMBER=12
[2025-11-26 00:04:55] Set ATHENA_CORE_NUMBER=12
[2025-11-26 00:04:56] Starting ATLAS job with PandaID=6891564399
[2025-11-26 00:04:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:20:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:20:54] 2025-11-27 15:19:44,226 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:20:54] 2025-11-27 15:19:44,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:20:54] 2025-11-27 15:19:44,264 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:20:54] 2025-11-27 15:19:44,267 | INFO     | sum of square deviations: 2548591506068.013
[2025-11-27 10:20:54] 2025-11-27 15:19:44,351 | INFO     | sum of deviations: 15272096297211.668
[2025-11-27 10:20:54] 2025-11-27 15:19:44,352 | INFO     | mean x: 1764195238.8379583
[2025-11-27 10:20:54] 2025-11-27 15:19:44,353 | INFO     | mean y: 3514170.378097126
[2025-11-27 10:20:54] 2025-11-27 15:19:44,353 | INFO     | intersect: -10568191617.09957
[2025-11-27 10:20:54] 2025-11-27 15:19:44,356 | INFO     | chi2: 14.23095555280587
[2025-11-27 10:20:54] 2025-11-27 15:19:44,360 | INFO     | sum of square deviations: 2529700903714.165
[2025-11-27 10:20:54] 2025-11-27 15:19:44,464 | INFO     | sum of deviations: 16185040018383.102
[2025-11-27 10:20:54] 2025-11-27 15:19:44,464 | INFO     | mean x: 1764195086.3537009
[2025-11-27 10:20:54] 2025-11-27 15:19:44,464 | INFO     | mean y: 3521538.908594138
[2025-11-27 10:20:54] 2025-11-27 15:19:44,464 | INFO     | intersect: -11283808133.52283
[2025-11-27 10:20:54] 2025-11-27 15:19:44,467 | INFO     | chi2: 10.386785800627901
[2025-11-27 10:20:54] 2025-11-27 15:19:44,468 | INFO     | current chi2=10.386785800627901 (change=27.012731070051206 %)
[2025-11-27 10:20:54] 2025-11-27 15:19:44,471 | INFO     | sum of square deviations: 2510903931021.813
[2025-11-27 10:20:54] 2025-11-27 15:19:44,572 | INFO     | sum of deviations: 17053184328973.068
[2025-11-27 10:20:54] 2025-11-27 15:19:44,572 | INFO     | mean x: 1764194933.8695219
[2025-11-27 10:20:54] 2025-11-27 15:19:44,572 | INFO     | mean y: 3528580.187250996
[2025-11-27 10:20:54] 2025-11-27 15:19:44,572 | INFO     | intersect: -11978268504.05016
[2025-11-27 10:20:54] 2025-11-27 15:19:44,575 | INFO     | chi2: 6.837289114603752
[2025-11-27 10:20:54] 2025-11-27 15:19:44,575 | INFO     | current chi2=6.837289114603752 (change=34.17319615669339 %)
[2025-11-27 10:20:54] 2025-11-27 15:19:44,578 | INFO     | sum of square deviations: 2492199865643.5303
[2025-11-27 10:20:54] 2025-11-27 15:19:44,760 | INFO     | sum of deviations: 17444450074547.812
[2025-11-27 10:20:54] 2025-11-27 15:19:44,761 | INFO     | mean x: 1764194781.3834248
[2025-11-27 10:20:54] 2025-11-27 15:19:44,761 | INFO     | mean y: 3531768.8557164255
[2025-11-27 10:20:54] 2025-11-27 15:19:44,761 | INFO     | intersect: -12345159927.1348
[2025-11-27 10:20:54] 2025-11-27 15:19:44,764 | INFO     | chi2: 5.856061945891051
[2025-11-27 10:20:54] 2025-11-27 15:19:44,764 | INFO     | current chi2=5.856061945891051 (change=14.351114195491602 %)
[2025-11-27 10:20:54] 2025-11-27 15:19:44,764 | INFO     | right removable region: 2002
[2025-11-27 10:20:54] 2025-11-27 15:19:44,767 | INFO     | sum of square deviations: 2529677709842.9785
[2025-11-27 10:20:54] 2025-11-27 15:19:44,857 | INFO     | sum of deviations: 14329745491006.873
[2025-11-27 10:20:54] 2025-11-27 15:19:44,858 | INFO     | mean x: 1764195391.4157972
[2025-11-27 10:20:54] 2025-11-27 15:19:44,858 | INFO     | mean y: 3521771.430203676
[2025-11-27 10:20:54] 2025-11-27 15:19:44,858 | INFO     | intersect: -9990032291.614779
[2025-11-27 10:20:54] 2025-11-27 15:19:44,861 | INFO     | chi2: 10.57675256558605
[2025-11-27 10:20:54] 2025-11-27 15:19:44,861 | INFO     | current chi2=10.57675256558605 (change=25.67784695595745 %)
[2025-11-27 10:20:54] 2025-11-27 15:19:44,864 | INFO     | sum of square deviations: 2510858279523.8423
[2025-11-27 10:20:54] 2025-11-27 15:19:44,948 | INFO     | sum of deviations: 13885089392996.084
[2025-11-27 10:20:54] 2025-11-27 15:19:44,948 | INFO     | mean x: 1764195543.991036
[2025-11-27 10:20:54] 2025-11-27 15:19:44,948 | INFO     | mean y: 3525374.33814741
[2025-11-27 10:20:54] 2025-11-27 15:19:44,948 | INFO     | intersect: -9752506272.213524
[2025-11-27 10:20:54] 2025-11-27 15:19:44,951 | INFO     | chi2: 9.802586084843064
[2025-11-27 10:20:54] 2025-11-27 15:19:44,951 | INFO     | current chi2=9.802586084843064 (change=7.319510179919672 %)
[2025-11-27 10:20:54] 2025-11-27 15:19:44,951 | INFO     | left removable region: 20
[2025-11-27 10:20:54] 2025-11-27 15:19:44,954 | INFO     | sum of square deviations: 2414576583345.0327
[2025-11-27 10:20:54] 2025-11-27 15:19:45,034 | INFO     | sum of deviations: 15580376281263.67
[2025-11-27 10:20:54] 2025-11-27 15:19:45,034 | INFO     | mean x: 1764195361.1634712
[2025-11-27 10:20:54] 2025-11-27 15:19:45,034 | INFO     | mean y: 3547320.68617558
[2025-11-27 10:20:54] 2025-11-27 15:19:45,035 | INFO     | intersect: -11380157694.173147
[2025-11-27 10:20:54] 2025-11-27 15:19:45,037 | INFO     | chi2: 1.183468595855173
[2025-11-27 10:20:54] 2025-11-27 15:19:45,037 | INFO     | current memory leak: 6.45 B/s (using 1982 data points, chi2=1.18)
[2025-11-27 10:20:54] 2025-11-27 15:19:45,052 | INFO     | could have reported an average CPU frequency of 2550 MHz (70 samples)
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | ..............................
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . Timing measurements:
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . get job = 0 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . initial setup = 4 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . payload setup = 41 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . stage-in = 0 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . payload execution = 123092 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,053 | INFO     | . stage-out = 6 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,054 | INFO     | . log creation = 1 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,054 | INFO     | ..............................
[2025-11-27 10:20:54] 2025-11-27 15:19:45,162 | INFO     | 
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | job summary report
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | --------------------------------------------------
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | PanDA job id: 6891564399
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | task id: 47493068
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | errors: (none)
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | pilot state: finished 
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | transexitcode: 0
[2025-11-27 10:20:54] 2025-11-27 15:19:45,163 | INFO     | exeerrorcode: 0
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | exeerrordiag: 
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | exitcode: 0
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | exitmsg: OK
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | cpuconsumptiontime: 296780 s
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | nevents: 1000
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | neventsw: 0
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | pid: 3523282
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | pgrp: 3523282
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | corecount: 12
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | event service: False
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | sizes: {0: 2284133, 1: 2284332, 2: 2284360, 13: 2284360, 24: 2284416, 30: 2284706, 35: 2284862, 123138: 2365885, 123145: 2374879, 123148: 2374935, 123160: 2375181}
[2025-11-27 10:20:54] 2025-11-27 15:19:45,164 | INFO     | --------------------------------------------------
[2025-11-27 10:20:54] 2025-11-27 15:19:45,165 | INFO     | 
[2025-11-27 10:20:54] 2025-11-27 15:19:45,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 10:20:54] 2025-11-27 15:19:45,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:20:54] 2025-11-27 15:19:45,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:20:54] 2025-11-27 15:19:45,195 | INFO     | job 6891564399 has completed (purged errors)
[2025-11-27 10:20:54] 2025-11-27 15:19:45,195 | INFO     | overall cleanup function is called
[2025-11-27 10:20:54] 2025-11-27 15:19:46,222 | INFO     | --- collectZombieJob: --- 10, [3523282]
[2025-11-27 10:20:54] 2025-11-27 15:19:46,222 | INFO     | zombie collector waiting for pid 3523282
[2025-11-27 10:20:54] 2025-11-27 15:19:46,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:20:54] 2025-11-27 15:19:46,222 | INFO     | collected zombie processes
[2025-11-27 10:20:54] 2025-11-27 15:19:46,222 | INFO     | will attempt to kill all subprocesses of pid=3523282
[2025-11-27 10:20:54] 2025-11-27 15:19:46,752 | INFO     | process IDs to be killed: [3523282] (in reverse order)
[2025-11-27 10:20:54] 2025-11-27 15:19:46,887 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:20:54] 2025-11-27 15:19:46,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:20:54] 2025-11-27 15:19:46,904 | INFO     | did not find any defunct processes belonging to 3523282
[2025-11-27 10:20:54] 2025-11-27 15:19:46,918 | INFO     | did not find any defunct processes belonging to 3523282
[2025-11-27 10:20:54] 2025-11-27 15:19:46,919 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:20:54] 2025-11-27 15:19:46,919 | INFO     | ready for new job
[2025-11-27 10:20:54] 2025-11-27 15:19:46,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:20:54] 2025-11-27 15:19:46,929 | INFO     | ***************************************
[2025-11-27 10:20:54] 2025-11-27 15:19:46,929 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:20:54] 2025-11-27 15:19:46,929 | INFO     | ***************************************
[2025-11-27 10:20:54] 2025-11-27 15:19:46,930 | INFO     | 
[2025-11-27 10:20:54] 2025-11-27 15:19:46,935 | INFO     | architecture information:
[2025-11-27 10:20:54] 2025-11-27 15:19:46,936 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:20:54] 2025-11-27 15:19:46,956 | INFO     | cat /etc/os-release:
[2025-11-27 10:20:54] NAME="CentOS Linux"
[2025-11-27 10:20:54] VERSION="7 (Core)"
[2025-11-27 10:20:54] ID="centos"
[2025-11-27 10:20:54] ID_LIKE="rhel fedora"
[2025-11-27 10:20:54] VERSION_ID="7"
[2025-11-27 10:20:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:20:54] ANSI_COLOR="0;31"
[2025-11-27 10:20:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:20:54] HOME_URL="https://www.centos.org/"
[2025-11-27 10:20:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:20:54] 
[2025-11-27 10:20:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:20:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:20:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:20:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:20:54] 
[2025-11-27 10:20:54] 2025-11-27 15:19:46,957 | INFO     | ***************************************
[2025-11-27 10:20:54] 2025-11-27 15:19:47,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 10:20:54] 2025-11-27 15:19:47,493 | INFO     | sufficient remaining disk space (119892082688 B)
[2025-11-27 10:20:54] 2025-11-27 15:19:47,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:20:54] 2025-11-27 15:19:47,493 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:20:54] 2025-11-27 15:19:47,493 | INFO     | update_server=False
[2025-11-27 10:20:54] 2025-11-27 15:19:47,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:20:54] 2025-11-27 15:19:47,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:20:54] 2025-11-27 15:19:47,494 | INFO     | aborting loop
[2025-11-27 10:20:54] 2025-11-27 15:19:47,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:20:54] 2025-11-27 15:19:48,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:20:54] 2025-11-27 15:19:48,060 | INFO     | all job control threads have been joined
[2025-11-27 10:20:54] 2025-11-27 15:19:48,106 | INFO     | all data control threads have been joined
[2025-11-27 10:20:54] 2025-11-27 15:19:48,501 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:48,502 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:48,703 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:48,818 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:48,879 | INFO     | all payload control threads have been joined
[2025-11-27 10:20:54] 2025-11-27 15:19:49,066 | INFO     | [job] control thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,112 | INFO     | [data] control thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,272 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,338 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,363 | INFO     | [job] validate thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,399 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,399 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,673 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:49,885 | INFO     | [payload] control thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:50,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:20:54] 2025-11-27 15:19:51,189 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:19:52,060 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:20:54] 2025-11-27 15:20:17,887 | INFO     | PID=3504409 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:20:54] 2025-11-27 15:20:17,888 | INFO     | .. there are 19 such processes running
[2025-11-27 10:20:54] 2025-11-27 15:20:17,888 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:20:54] 2025-11-27 15:20:17,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:20:54] 2025-11-27 15:20:17,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:20:54] 2025-11-27 15:20:46,830 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:20:54] 2025-11-27 15:20:48,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251715233600)>', '<ExcThread(monitor, started 140251441895168)>']
[2025-11-27 10:20:54] 2025-11-27 15:20:49,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:20:54] 2025-11-27 15:20:49,079 | INFO     | [monitor] control thread has ended
[2025-11-27 10:20:54] 2025-11-27 15:20:53,778 | INFO     | all workflow threads have been joined
[2025-11-27 10:20:54] 2025-11-27 15:20:53,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:20:54] 2025-11-27 15:20:53,779 | INFO     | traces error code: 0
[2025-11-27 10:20:54] 2025-11-27 15:20:53,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:20:54] 2025-11-27 15:20:54,088 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:20:54] 2025-11-27 15:20:54,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:20:54] 2025-11-27 15:20:54,104 [wrapper] pilotpid: 3504409
[2025-11-27 10:20:54] 2025-11-27 15:20:54,109 [wrapper] Pilot exit status: 0
[2025-11-27 10:20:54] 2025-11-27 15:20:54,138 [wrapper] pandaids: 6891564399
[2025-11-27 10:20:54] 2025-11-27 15:20:54,224 [wrapper] cleanup supervisor_pilot 3719251 3504410
[2025-11-27 10:20:54] 2025-11-27 15:20:54,228 [wrapper] Test setup, not cleaning
[2025-11-27 10:20:54] 2025-11-27 15:20:54,231 [wrapper] apfmon messages muted
[2025-11-27 10:20:54] 2025-11-27 15:20:54,234 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:20:54] 2025-11-27 15:20:54,237 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:20:54]  *** Error codes and diagnostics ***
[2025-11-27 10:20:54]     "exeErrorCode": 0,
[2025-11-27 10:20:54]     "exeErrorDiag": "",
[2025-11-27 10:20:54]     "pilotErrorCode": 0,
[2025-11-27 10:20:54]     "pilotErrorDiag": "",
[2025-11-27 10:20:54]  *** Listing of results directory ***
[2025-11-27 10:20:54] total 1344992
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:29 queuedata.json
[2025-11-27 10:20:54] -rwx------. 1 boincer umatlas     36292 Nov 18 10:29 runpilot2-wrapper.sh
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:20:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 10:20:54] -rw-r--r--. 2 boincer umatlas 411312519 Nov 26 00:04 EVNT.47493065._000115.pool.root.1
[2025-11-27 10:20:54] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 10:20:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 10:20:54] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:04 input.tar.gz
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 10:20:54] drwx------. 5 boincer umatlas      4096 Nov 26 00:06 pilot3
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas       533 Nov 27 10:00 boinc_task_state.xml
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas 925315177 Nov 27 10:17 HITS.47493068._001144.pool.root.1
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas      1064 Nov 27 10:19 memory_monitor_summary.json
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas   3286308 Nov 27 10:19 log.47493068._001144.job.log.tgz.1
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas        95 Nov 27 10:19 pilot_heartbeat.json
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas      8627 Nov 27 10:19 heartbeat.json
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas      6882 Nov 27 10:20 init_data.xml
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:20 wrapper_checkpoint.txt
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:20 boinc_mmap_file
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas      4825 Nov 27 10:20 pilotlog.txt
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas  15071222 Nov 27 10:20 log.47493068._001144.job.log.1
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas       353 Nov 27 10:20 output.list
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:20 runtime_log
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas  18380800 Nov 27 10:20 result.tar.gz
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas      8717 Nov 27 10:20 runtime_log.err
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas       665 Nov 27 10:20 6MONDmXpcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5EFKDmycjuwm.diag
[2025-11-27 10:20:54] -rw-r--r--. 1 boincer umatlas     21180 Nov 27 10:20 stderr.txt
[2025-11-27 10:20:54] HITS file was successfully produced:
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas 925315177 Nov 27 10:17 shared/HITS.pool.root.1
[2025-11-27 10:20:54]  *** Contents of shared directory: ***
[2025-11-27 10:20:54] total 1323864
[2025-11-27 10:20:54] -rw-r--r--. 2 boincer umatlas 411312519 Nov 26 00:04 ATLAS.root_0
[2025-11-27 10:20:54] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 10:20:54] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:04 input.tar.gz
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas 925315177 Nov 27 10:17 HITS.pool.root.1
[2025-11-27 10:20:54] -rw-------. 1 boincer umatlas  18380800 Nov 27 10:20 result.tar.gz
10:20:55 (3497288): run_atlas exited; CPU time 299636.120656
10:20:55 (3497288): called boinc_finish(0)

</stderr_txt>
]]>

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