Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:07 (2408483): wrapper (7.7.26015): starting
00:11:07 (2408483): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:11:07] Arguments: --nthreads 8
[2025-11-26 00:11:07] Threads: 8
[2025-11-26 00:11:07] Checking for CVMFS
[2025-11-26 00:11:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:11:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:11:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:11:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:11:10] 2.13.3.0 11561 27916 152944 153310 2 59 24639609 32935937 24369 16776704 0 160941694 99.795 81695465 32134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:11:10] CVMFS is ok
[2025-11-26 00:11:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:11:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:11:10] Further information can be found at the LHC@home message board.
[2025-11-26 00:11:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:11:10] Checking for apptainer binary...
[2025-11-26 00:11:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:11:10] Running /usr/bin/apptainer --version
[2025-11-26 00:11:10] apptainer version 1.4.4-1.el9
[2025-11-26 00:11:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:11:10] c-8-14.aglt2.org
[2025-11-26 00:11:10] apptainer works
[2025-11-26 00:11:10] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:11:10] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:11:11] Starting ATLAS job with PandaID=6891555860
[2025-11-26 00:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:13:53]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:13:53] 2025-11-27 06:41:07,754 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 09:13:53] 2025-11-27 06:41:07,779 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.156625
[2025-11-27 09:13:53] 2025-11-27 06:41:07,795 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6891555860/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:13:53] 2025-11-27 06:41:07,796 | INFO     | extracted standard info from prmon json
[2025-11-27 09:13:53] 2025-11-27 06:41:07,799 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:13:53] 2025-11-27 06:41:07,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:13:53] 2025-11-27 06:41:07,864 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:13:53] 2025-11-27 06:41:07,872 | INFO     | sum of square deviations: 1048594352984.1843
[2025-11-27 09:13:53] 2025-11-27 06:41:07,940 | INFO     | sum of deviations: 6151504680700.896
[2025-11-27 09:13:53] 2025-11-27 06:41:07,940 | INFO     | mean x: 1764179837.0233178
[2025-11-27 09:13:53] 2025-11-27 06:41:07,940 | INFO     | mean y: 2909275.9173884075
[2025-11-27 09:13:53] 2025-11-27 06:41:07,940 | INFO     | intersect: -10346527085.400463
[2025-11-27 09:13:53] 2025-11-27 06:41:07,942 | INFO     | chi2: 12.15115312585103
[2025-11-27 09:13:53] 2025-11-27 06:41:07,944 | INFO     | sum of square deviations: 1038150420978.9296
[2025-11-27 09:13:53] 2025-11-27 06:41:08,037 | INFO     | sum of deviations: 6614078785842.286
[2025-11-27 09:13:53] 2025-11-27 06:41:08,038 | INFO     | mean x: 1764179684.526738
[2025-11-27 09:13:53] 2025-11-27 06:41:08,038 | INFO     | mean y: 2916030.2179144383
[2025-11-27 09:13:53] 2025-11-27 06:41:08,038 | INFO     | intersect: -11236710896.71569
[2025-11-27 09:13:53] 2025-11-27 06:41:08,040 | INFO     | chi2: 9.51534519884982
[2025-11-27 09:13:53] 2025-11-27 06:41:08,040 | INFO     | current chi2=9.51534519884982 (change=21.691833686085705 %)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,040 | INFO     | right removable region: 1495
[2025-11-27 09:13:53] 2025-11-27 06:41:08,042 | INFO     | sum of square deviations: 1038149484018.9312
[2025-11-27 09:13:53] 2025-11-27 06:41:08,151 | INFO     | time since job start (91730s) is within the limit (172800.0s)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,500 | INFO     | monitor loop #5482: job 0:6891555860 is in state 'finished'
[2025-11-27 09:13:53] 2025-11-27 06:41:08,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,510 | INFO     | sum of deviations: 5573135098184.543
[2025-11-27 09:13:53] 2025-11-27 06:41:08,515 | INFO     | mean x: 1764179989.526738
[2025-11-27 09:13:53] 2025-11-27 06:41:08,515 | INFO     | mean y: 2917718.811497326
[2025-11-27 09:13:53] 2025-11-27 06:41:08,515 | INFO     | intersect: -9467792974.107378
[2025-11-27 09:13:53] 2025-11-27 06:41:08,517 | INFO     | chi2: 8.400347109473085
[2025-11-27 09:13:53] 2025-11-27 06:41:08,517 | INFO     | current chi2=8.400347109473085 (change=30.867901815822517 %)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,523 | INFO     | sum of square deviations: 1027774197753.6422
[2025-11-27 09:13:53] 2025-11-27 06:41:08,577 | INFO     | sum of deviations: 5079099029991.928
[2025-11-27 09:13:53] 2025-11-27 06:41:08,578 | INFO     | mean x: 1764180142.0301812
[2025-11-27 09:13:53] 2025-11-27 06:41:08,578 | INFO     | mean y: 2924978.1126760566
[2025-11-27 09:13:53] 2025-11-27 06:41:08,578 | INFO     | intersect: -8715376831.46859
[2025-11-27 09:13:53] 2025-11-27 06:41:08,580 | INFO     | chi2: 5.734469503478316
[2025-11-27 09:13:53] 2025-11-27 06:41:08,580 | INFO     | current chi2=5.734469503478316 (change=31.73532678177613 %)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,582 | INFO     | sum of square deviations: 1017468534116.0131
[2025-11-27 09:13:53] 2025-11-27 06:41:08,636 | INFO     | sum of deviations: 4875178652025.282
[2025-11-27 09:13:53] 2025-11-27 06:41:08,637 | INFO     | mean x: 1764180294.5316286
[2025-11-27 09:13:53] 2025-11-27 06:41:08,637 | INFO     | mean y: 2927993.057873486
[2025-11-27 09:13:53] 2025-11-27 06:41:08,637 | INFO     | intersect: -8450104038.735267
[2025-11-27 09:13:53] 2025-11-27 06:41:08,639 | INFO     | chi2: 5.295310975035264
[2025-11-27 09:13:53] 2025-11-27 06:41:08,639 | INFO     | current chi2=5.295310975035264 (change=7.658224150929301 %)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,640 | INFO     | left removable region: 30
[2025-11-27 09:13:53] 2025-11-27 06:41:08,641 | INFO     | sum of square deviations: 974938769314.555
[2025-11-27 09:13:53] 2025-11-27 06:41:08,694 | INFO     | sum of deviations: 5203646400707.778
[2025-11-27 09:13:53] 2025-11-27 06:41:08,694 | INFO     | mean x: 1764180569.0313993
[2025-11-27 09:13:53] 2025-11-27 06:41:08,694 | INFO     | mean y: 2940481.1788395904
[2025-11-27 09:13:53] 2025-11-27 06:41:08,695 | INFO     | intersect: -9413211750.302422
[2025-11-27 09:13:53] 2025-11-27 06:41:08,697 | INFO     | chi2: 1.7470409553354656
[2025-11-27 09:13:53] 2025-11-27 06:41:08,697 | INFO     | current memory leak: 5.34 B/s (using 1465 data points, chi2=1.75)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,698 | INFO     | could have reported an average CPU frequency of 2600 MHz (53 samples)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,698 | INFO     | ..............................
[2025-11-27 09:13:53] 2025-11-27 06:41:08,698 | INFO     | . Timing measurements:
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . get job = 0 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . initial setup = 5 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . payload setup = 46 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . stage-in = 0 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . payload execution = 91593 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . stage-out = 4 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | . log creation = 1 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,699 | INFO     | ..............................
[2025-11-27 09:13:53] 2025-11-27 06:41:08,841 | INFO     | 
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | job summary report
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | --------------------------------------------------
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | PanDA job id: 6891555860
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | task id: 47493068
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | errors: (none)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | pilot state: finished 
[2025-11-27 09:13:53] 2025-11-27 06:41:08,842 | INFO     | transexitcode: 0
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | exeerrorcode: 0
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | exeerrordiag: 
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | exitcode: 0
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | exitmsg: OK
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | cpuconsumptiontime: 311883 s
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | nevents: 1000
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | neventsw: 0
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | pid: 2429077
[2025-11-27 09:13:53] 2025-11-27 06:41:08,843 | INFO     | pgrp: 2429077
[2025-11-27 09:13:53] 2025-11-27 06:41:08,844 | INFO     | corecount: 8
[2025-11-27 09:13:53] 2025-11-27 06:41:08,844 | INFO     | event service: False
[2025-11-27 09:13:53] 2025-11-27 06:41:08,844 | INFO     | sizes: {0: 2284073, 1: 2284157, 2: 2284356, 13: 2284356, 24: 2284412, 34: 2284702, 35: 2284858, 91644: 2352194, 91645: 2352193, 91650: 2361243, 91651: 2361299, 916
[2025-11-27 09:13:53] 2025-11-27 06:41:08,844 | INFO     | --------------------------------------------------
[2025-11-27 09:13:53] 2025-11-27 06:41:08,844 | INFO     | 
[2025-11-27 09:13:53] 2025-11-27 06:41:08,844 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 09:13:53] 2025-11-27 06:41:08,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:13:53] 2025-11-27 06:41:08,871 | INFO     | job 6891555860 has completed (purged errors)
[2025-11-27 09:13:53] 2025-11-27 06:41:08,872 | INFO     | overall cleanup function is called
[2025-11-27 09:13:53] 2025-11-27 06:41:09,893 | INFO     | --- collectZombieJob: --- 10, [2429077]
[2025-11-27 09:13:53] 2025-11-27 06:41:09,893 | INFO     | zombie collector waiting for pid 2429077
[2025-11-27 09:13:53] 2025-11-27 06:41:09,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:13:53] 2025-11-27 06:41:09,893 | INFO     | collected zombie processes
[2025-11-27 09:13:53] 2025-11-27 06:41:09,893 | INFO     | will attempt to kill all subprocesses of pid=2429077
[2025-11-27 09:13:53] 2025-11-27 06:41:10,439 | INFO     | process IDs to be killed: [2429077] (in reverse order)
[2025-11-27 09:13:53] 2025-11-27 06:41:10,681 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:13:53] 2025-11-27 06:41:10,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:13:53] 2025-11-27 06:41:10,811 | INFO     | did not find any defunct processes belonging to 2429077
[2025-11-27 09:13:53] 2025-11-27 06:41:10,881 | INFO     | did not find any defunct processes belonging to 2429077
[2025-11-27 09:13:53] 2025-11-27 06:41:10,913 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:13:53] 2025-11-27 06:41:10,915 | INFO     | ready for new job
[2025-11-27 09:13:53] 2025-11-27 06:41:10,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:13:53] 2025-11-27 06:41:10,981 | INFO     | ***************************************
[2025-11-27 09:13:53] 2025-11-27 06:41:10,981 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:13:53] 2025-11-27 06:41:10,982 | INFO     | ***************************************
[2025-11-27 09:13:53] 2025-11-27 06:41:10,982 | INFO     | 
[2025-11-27 09:13:53] 2025-11-27 06:41:11,009 | INFO     | architecture information:
[2025-11-27 09:13:53] 2025-11-27 06:41:11,012 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:13:53] 2025-11-27 06:41:11,033 | INFO     | cat /etc/os-release:
[2025-11-27 09:13:53] NAME="CentOS Linux"
[2025-11-27 09:13:53] VERSION="7 (Core)"
[2025-11-27 09:13:53] ID="centos"
[2025-11-27 09:13:53] ID_LIKE="rhel fedora"
[2025-11-27 09:13:53] VERSION_ID="7"
[2025-11-27 09:13:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:13:53] ANSI_COLOR="0;31"
[2025-11-27 09:13:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:13:53] HOME_URL="https://www.centos.org/"
[2025-11-27 09:13:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:13:53] 
[2025-11-27 09:13:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:13:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:13:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:13:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:13:53] 
[2025-11-27 09:13:53] 2025-11-27 06:41:11,034 | INFO     | ***************************************
[2025-11-27 09:13:53] 2025-11-27 06:41:11,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 09:13:53] 2025-11-27 06:41:11,616 | INFO     | sufficient remaining disk space (72363278336 B)
[2025-11-27 09:13:53] 2025-11-27 06:41:11,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:13:53] 2025-11-27 06:41:11,617 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:13:53] 2025-11-27 06:41:11,617 | INFO     | update_server=False
[2025-11-27 09:13:53] 2025-11-27 06:41:11,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:13:53] 2025-11-27 06:41:11,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:13:53] 2025-11-27 06:41:12,016 | INFO     | all data control threads have been joined
[2025-11-27 09:13:53] 2025-11-27 06:41:12,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:13:53] 2025-11-27 06:41:12,025 | INFO     | aborting loop
[2025-11-27 09:13:53] 2025-11-27 06:41:12,620 | INFO     | all job control threads have been joined
[2025-11-27 09:13:53] 2025-11-27 06:41:12,625 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:12,832 | INFO     | all payload control threads have been joined
[2025-11-27 09:13:53] 2025-11-27 06:41:12,883 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,022 | INFO     | [data] control thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,035 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:13:53] 2025-11-27 06:41:13,203 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,546 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,626 | INFO     | [job] control thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,665 | INFO     | [job] validate thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,830 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,838 | INFO     | [payload] control thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:13,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:13:53] 2025-11-27 06:41:14,018 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:14,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:14,064 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:14,871 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:15,082 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:15,627 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:13:53] 2025-11-27 06:41:41,996 | INFO     | PID=2412963 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:13:53] 2025-11-27 06:41:41,996 | INFO     | .. there are 44 such processes running
[2025-11-27 09:13:53] 2025-11-27 06:41:41,997 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:13:53] 2025-11-27 06:41:41,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:13:53] 2025-11-27 06:41:41,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:13:53] 2025-11-27 06:42:02,036 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:13:53] 2025-11-27 06:42:02,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861196945216)>', '<ExcThread(monitor, started 139860543256320)>']
[2025-11-27 09:13:53] 2025-11-27 06:42:03,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:13:53] 2025-11-27 06:42:03,180 | INFO     | [monitor] control thread has ended
[2025-11-27 09:13:53] 2025-11-27 06:42:07,693 | INFO     | all workflow threads have been joined
[2025-11-27 09:13:53] 2025-11-27 06:42:07,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:13:53] 2025-11-27 06:42:07,693 | INFO     | traces error code: 0
[2025-11-27 09:13:53] 2025-11-27 06:42:07,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:13:53] 2025-11-27 06:42:08,108 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:13:53] 2025-11-27 06:42:08,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:13:53] 2025-11-27 06:42:08,174 [wrapper] pilotpid: 2412963
[2025-11-27 09:13:53] 2025-11-27 06:42:08,194 [wrapper] Pilot exit status: 0
[2025-11-27 09:13:53] 2025-11-27 06:42:08,289 [wrapper] pandaids: 6891555860
[2025-11-27 09:13:53] 2025-11-27 06:42:08,409 [wrapper] cleanup supervisor_pilot 3716685 2412964
[2025-11-27 09:13:53] 2025-11-27 06:42:08,432 [wrapper] Test setup, not cleaning
[2025-11-27 09:13:53] 2025-11-27 06:42:08,436 [wrapper] apfmon messages muted
[2025-11-27 09:13:53] 2025-11-27 06:42:08,439 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:13:53] 2025-11-27 06:42:08,441 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:13:53]  *** Error codes and diagnostics ***
[2025-11-27 09:13:53]     "exeErrorCode": 0,
[2025-11-27 09:13:53]     "exeErrorDiag": "",
[2025-11-27 09:13:53]     "pilotErrorCode": 0,
[2025-11-27 09:13:53]     "pilotErrorDiag": "",
[2025-11-27 09:13:53]  *** Listing of results directory ***
[2025-11-27 09:13:53] total 1332012
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:15 queuedata.json
[2025-11-27 09:13:53] -rwx------. 1 boincer umatlas     36292 Nov 18 10:18 runpilot2-wrapper.sh
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:13:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:11 run_atlas
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:11 job.xml
[2025-11-27 09:13:53] -rw-r--r--. 2 boincer umatlas 411219612 Nov 26 00:11 EVNT.47493065._000041.pool.root.1
[2025-11-27 09:13:53] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:11 start_atlas.sh
[2025-11-27 09:13:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:11 shared
[2025-11-27 09:13:53] -rw-r--r--. 2 boincer umatlas    590093 Nov 26 00:11 input.tar.gz
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:11 boinc_lockfile
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas      2771 Nov 26 00:11 pandaJob.out
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas    991877 Nov 26 00:12 agis_schedconf.cvmfs.json
[2025-11-27 09:13:53] drwx------. 5 boincer umatlas      4096 Nov 26 00:12 pilot3
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas       533 Nov 27 01:24 boinc_task_state.xml
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas 920742782 Nov 27 01:39 HITS.47493068._000403.pool.root.1
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas      1069 Nov 27 01:40 memory_monitor_summary.json
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas   1516240 Nov 27 01:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas   2511669 Nov 27 01:40 log.47493068._000403.job.log.tgz.1
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas      8632 Nov 27 01:41 heartbeat.json
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas        95 Nov 27 01:41 pilot_heartbeat.json
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas      4824 Nov 27 01:42 pilotlog.txt
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas  11536812 Nov 27 01:42 log.47493068._000403.job.log.1
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas       353 Nov 27 01:42 output.list
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas       620 Nov 27 01:42 runtime_log
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas  14069760 Nov 27 01:42 result.tar.gz
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas       662 Nov 27 01:42 S2KLDmRecf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkFFKDme8Dson.diag
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas      8694 Nov 27 01:42 runtime_log.err
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas      6661 Nov 27 09:09 init_data.xml
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:13 boinc_mmap_file
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:13 wrapper_checkpoint.txt
[2025-11-27 09:13:53] -rw-r--r--. 1 boincer umatlas     21369 Nov 27 09:13 stderr.txt
[2025-11-27 09:13:53] HITS file was successfully produced:
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas 920742782 Nov 27 01:39 shared/HITS.pool.root.1
[2025-11-27 09:13:53]  *** Contents of shared directory: ***
[2025-11-27 09:13:53] total 1315092
[2025-11-27 09:13:53] -rw-r--r--. 2 boincer umatlas 411219612 Nov 26 00:11 ATLAS.root_0
[2025-11-27 09:13:53] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:11 start_atlas.sh
[2025-11-27 09:13:53] -rw-r--r--. 2 boincer umatlas    590093 Nov 26 00:11 input.tar.gz
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas 920742782 Nov 27 01:39 HITS.pool.root.1
[2025-11-27 09:13:53] -rw-------. 1 boincer umatlas  14069760 Nov 27 01:42 result.tar.gz
09:14:14 (2408483): run_atlas exited; CPU time 315667.197809
09:14:14 (2408483): called boinc_finish(0)

</stderr_txt>
]]>

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