Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:56:41 (710578): wrapper (7.7.26015): starting
21:56:41 (710578): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:56:41] Arguments: --nthreads 8
[2025-11-26 21:56:41] Threads: 8
[2025-11-26 21:56:41] Checking for CVMFS
[2025-11-26 21:56:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:56:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:56:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:56:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:56:42] 2.13.2.0 7301 37424 265128 153343 0 750 40379989 40960000 28197 16776704 0 242458579 99.677 209761407 35229 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:56:42] CVMFS is ok
[2025-11-26 21:56:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:56:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:56:42] Further information can be found at the LHC@home message board.
[2025-11-26 21:56:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:56:42] Checking for apptainer binary...
[2025-11-26 21:56:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:56:42] Running /usr/bin/apptainer --version
[2025-11-26 21:56:42] apptainer version 1.4.4-1.el9
[2025-11-26 21:56:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:56:42] c-212-17.aglt2.org
[2025-11-26 21:56:42] apptainer works
[2025-11-26 21:56:42] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:56:42] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:56:42] Starting ATLAS job with PandaID=6891106896
[2025-11-26 21:56:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:45:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:45:12] 2025-11-27 23:44:06,933 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:45:12] 2025-11-27 23:44:06,948 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3236.206833333333
[2025-11-27 18:45:12] 2025-11-27 23:44:06,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891106896/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:45:12] 2025-11-27 23:44:06,963 | INFO     | extracted standard info from prmon json
[2025-11-27 18:45:12] 2025-11-27 23:44:06,963 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:45:12] 2025-11-27 23:44:06,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:45:12] 2025-11-27 23:44:06,978 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:45:12] 2025-11-27 23:44:06,979 | INFO     | sum of square deviations: 571412784308.5554
[2025-11-27 18:45:12] 2025-11-27 23:44:07,008 | INFO     | sum of deviations: 3701697717619.228
[2025-11-27 18:45:12] 2025-11-27 23:44:07,008 | INFO     | mean x: 1764249609.1549754
[2025-11-27 18:45:12] 2025-11-27 23:44:07,008 | INFO     | mean y: 2935509.0040783035
[2025-11-27 18:45:12] 2025-11-27 23:44:07,008 | INFO     | intersect: -11426138062.428453
[2025-11-27 18:45:12] 2025-11-27 23:44:07,009 | INFO     | chi2: 6.277640252061352
[2025-11-27 18:45:12] 2025-11-27 23:44:07,010 | INFO     | sum of square deviations: 564450695847.304
[2025-11-27 18:45:12] 2025-11-27 23:44:07,041 | INFO     | sum of deviations: 4105268819714.9814
[2025-11-27 18:45:12] 2025-11-27 23:44:07,042 | INFO     | mean x: 1764249456.6617527
[2025-11-27 18:45:12] 2025-11-27 23:44:07,042 | INFO     | mean y: 2944346.2178542176
[2025-11-27 18:45:12] 2025-11-27 23:44:07,042 | INFO     | intersect: -12828501053.562292
[2025-11-27 18:45:12] 2025-11-27 23:44:07,047 | INFO     | chi2: 3.1641355384093095
[2025-11-27 18:45:12] 2025-11-27 23:44:07,047 | INFO     | current chi2=3.1641355384093095 (change=49.59673680933977 %)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,048 | INFO     | sum of square deviations: 557545250677.1102
[2025-11-27 18:45:12] 2025-11-27 23:44:07,099 | INFO     | sum of deviations: 4194020373564.6035
[2025-11-27 18:45:12] 2025-11-27 23:44:07,099 | INFO     | mean x: 1764249304.1669407
[2025-11-27 18:45:12] 2025-11-27 23:44:07,099 | INFO     | mean y: 2946301.681743421
[2025-11-27 18:45:12] 2025-11-27 23:44:07,099 | INFO     | intersect: -13268259069.967024
[2025-11-27 18:45:12] 2025-11-27 23:44:07,104 | INFO     | chi2: 2.7755850571976586
[2025-11-27 18:45:12] 2025-11-27 23:44:07,104 | INFO     | current chi2=2.7755850571976586 (change=12.279830509630603 %)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,104 | INFO     | right removable region: 1215
[2025-11-27 18:45:12] 2025-11-27 23:44:07,105 | INFO     | sum of square deviations: 564449532701.6266
[2025-11-27 18:45:12] 2025-11-27 23:44:07,161 | INFO     | sum of deviations: 3343703563281.6777
[2025-11-27 18:45:12] 2025-11-27 23:44:07,161 | INFO     | mean x: 1764249761.6609337
[2025-11-27 18:45:12] 2025-11-27 23:44:07,161 | INFO     | mean y: 2943341.859131859
[2025-11-27 18:45:12] 2025-11-27 23:44:07,161 | INFO     | intersect: -10448173848.98962
[2025-11-27 18:45:12] 2025-11-27 23:44:07,162 | INFO     | chi2: 3.8886814537866403
[2025-11-27 18:45:12] 2025-11-27 23:44:07,162 | INFO     | current chi2=3.8886814537866403 (change=38.05504460836639 %)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,163 | INFO     | sum of square deviations: 557543371034.4331
[2025-11-27 18:45:12] 2025-11-27 23:44:07,176 | INFO     | monitor loop #4585: job 0:6891106896 is in state 'finished'
[2025-11-27 18:45:12] 2025-11-27 23:44:07,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,240 | INFO     | sum of deviations: 3241278242897.739
[2025-11-27 18:45:12] 2025-11-27 23:44:07,240 | INFO     | mean x: 1764249914.1636512
[2025-11-27 18:45:12] 2025-11-27 23:44:07,241 | INFO     | mean y: 2945603.383223684
[2025-11-27 18:45:12] 2025-11-27 23:44:07,241 | INFO     | intersect: -10253520815.010769
[2025-11-27 18:45:12] 2025-11-27 23:44:07,251 | INFO     | chi2: 3.8222027431486585
[2025-11-27 18:45:12] 2025-11-27 23:44:07,251 | INFO     | current chi2=3.8222027431486585 (change=1.7095437471034702 %)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,251 | INFO     | left removable region: 20
[2025-11-27 18:45:12] 2025-11-27 23:44:07,252 | INFO     | sum of square deviations: 529154155648.79803
[2025-11-27 18:45:12] 2025-11-27 23:44:07,332 | INFO     | sum of deviations: 3563231148368.5605
[2025-11-27 18:45:12] 2025-11-27 23:44:07,332 | INFO     | mean x: 1764249883.682845
[2025-11-27 18:45:12] 2025-11-27 23:44:07,332 | INFO     | mean y: 2960164.5054393304
[2025-11-27 18:45:12] 2025-11-27 23:44:07,332 | INFO     | intersect: -11877188695.587147
[2025-11-27 18:45:12] 2025-11-27 23:44:07,333 | INFO     | chi2: 0.250221033415982
[2025-11-27 18:45:12] 2025-11-27 23:44:07,333 | INFO     | current memory leak: 6.73 B/s (using 1195 data points, chi2=0.25)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,334 | INFO     | could have reported an average CPU frequency of 3196 MHz (45 samples)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | ..............................
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . Timing measurements:
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . get job = 0 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . initial setup = 2 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . payload setup = 7 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . stage-in = 0 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . payload execution = 74789 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . stage-out = 3 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | . log creation = 0 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,335 | INFO     | ..............................
[2025-11-27 18:45:12] 2025-11-27 23:44:07,588 | INFO     | time since job start (74833s) is within the limit (172800.0s)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,680 | INFO     | 
[2025-11-27 18:45:12] 2025-11-27 23:44:07,680 | INFO     | job summary report
[2025-11-27 18:45:12] 2025-11-27 23:44:07,680 | INFO     | --------------------------------------------------
[2025-11-27 18:45:12] 2025-11-27 23:44:07,680 | INFO     | PanDA job id: 6891106896
[2025-11-27 18:45:12] 2025-11-27 23:44:07,680 | INFO     | task id: 47483661
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | errors: (none)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | pilot state: finished 
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | transexitcode: 0
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | exeerrorcode: 0
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | exeerrordiag: 
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | exitcode: 0
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | exitmsg: OK
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | cpuconsumptiontime: 206424 s
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | nevents: 1000
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | neventsw: 0
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | pid: 721375
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | pgrp: 721375
[2025-11-27 18:45:12] 2025-11-27 23:44:07,681 | INFO     | corecount: 8
[2025-11-27 18:45:12] 2025-11-27 23:44:07,682 | INFO     | event service: False
[2025-11-27 18:45:12] 2025-11-27 23:44:07,682 | INFO     | sizes: {0: 2283470, 1: 2284326, 5: 2284588, 12: 2284644, 74800: 2344673, 74804: 2353667, 74807: 2353851, 74816: 2354097}
[2025-11-27 18:45:12] 2025-11-27 23:44:07,682 | INFO     | --------------------------------------------------
[2025-11-27 18:45:12] 2025-11-27 23:44:07,682 | INFO     | 
[2025-11-27 18:45:12] 2025-11-27 23:44:07,682 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 18:45:12] 2025-11-27 23:44:07,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | job 6891106896 has completed (purged errors)
[2025-11-27 18:45:12] 2025-11-27 23:44:07,729 | INFO     | overall cleanup function is called
[2025-11-27 18:45:12] 2025-11-27 23:44:08,808 | INFO     | --- collectZombieJob: --- 10, [721375]
[2025-11-27 18:45:12] 2025-11-27 23:44:08,808 | INFO     | zombie collector waiting for pid 721375
[2025-11-27 18:45:12] 2025-11-27 23:44:08,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:45:12] 2025-11-27 23:44:08,808 | INFO     | collected zombie processes
[2025-11-27 18:45:12] 2025-11-27 23:44:08,809 | INFO     | will attempt to kill all subprocesses of pid=721375
[2025-11-27 18:45:12] 2025-11-27 23:44:09,495 | INFO     | process IDs to be killed: [721375] (in reverse order)
[2025-11-27 18:45:12] 2025-11-27 23:44:09,811 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:45:12] 2025-11-27 23:44:09,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:45:12] 2025-11-27 23:44:09,851 | INFO     | did not find any defunct processes belonging to 721375
[2025-11-27 18:45:12] 2025-11-27 23:44:09,900 | INFO     | did not find any defunct processes belonging to 721375
[2025-11-27 18:45:12] 2025-11-27 23:44:09,908 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:45:12] 2025-11-27 23:44:09,908 | INFO     | ready for new job
[2025-11-27 18:45:12] 2025-11-27 23:44:09,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:45:12] 2025-11-27 23:44:09,922 | INFO     | ***************************************
[2025-11-27 18:45:12] 2025-11-27 23:44:09,922 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:45:12] 2025-11-27 23:44:09,922 | INFO     | ***************************************
[2025-11-27 18:45:12] 2025-11-27 23:44:09,922 | INFO     | 
[2025-11-27 18:45:12] 2025-11-27 23:44:09,936 | INFO     | architecture information:
[2025-11-27 18:45:12] 2025-11-27 23:44:09,956 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:45:12] 2025-11-27 23:44:09,989 | INFO     | cat /etc/os-release:
[2025-11-27 18:45:12] NAME="CentOS Linux"
[2025-11-27 18:45:12] VERSION="7 (Core)"
[2025-11-27 18:45:12] ID="centos"
[2025-11-27 18:45:12] ID_LIKE="rhel fedora"
[2025-11-27 18:45:12] VERSION_ID="7"
[2025-11-27 18:45:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:45:12] ANSI_COLOR="0;31"
[2025-11-27 18:45:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:45:12] HOME_URL="https://www.centos.org/"
[2025-11-27 18:45:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:45:12] 
[2025-11-27 18:45:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:45:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:45:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:45:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:45:12] 
[2025-11-27 18:45:12] 2025-11-27 23:44:09,989 | INFO     | ***************************************
[2025-11-27 18:45:12] 2025-11-27 23:44:10,492 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 18:45:12] 2025-11-27 23:44:10,518 | INFO     | sufficient remaining disk space (124396765184 B)
[2025-11-27 18:45:12] 2025-11-27 23:44:10,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:45:12] 2025-11-27 23:44:10,518 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:45:12] 2025-11-27 23:44:10,518 | INFO     | update_server=False
[2025-11-27 18:45:12] 2025-11-27 23:44:10,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:45:12] 2025-11-27 23:44:10,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:45:12] 2025-11-27 23:44:10,689 | INFO     | aborting loop
[2025-11-27 18:45:12] 2025-11-27 23:44:10,813 | INFO     | all data control threads have been joined
[2025-11-27 18:45:12] 2025-11-27 23:44:10,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:45:12] 2025-11-27 23:44:11,523 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:11,590 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:11,619 | INFO     | all payload control threads have been joined
[2025-11-27 18:45:12] 2025-11-27 23:44:11,690 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:11,695 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:11,754 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:11,818 | INFO     | [data] control thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:11,906 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,099 | INFO     | all job control threads have been joined
[2025-11-27 18:45:12] 2025-11-27 23:44:12,375 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:45:12] 2025-11-27 23:44:12,625 | INFO     | [payload] control thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,657 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,658 | INFO     | [job] validate thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,865 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:12,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:45:12] 2025-11-27 23:44:13,105 | INFO     | [job] control thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:13,558 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:16,986 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:45:12] 2025-11-27 23:44:41,244 | INFO     | PID=714314 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 18:45:12] 2025-11-27 23:44:41,244 | INFO     | .. there are 36 such processes running
[2025-11-27 18:45:12] 2025-11-27 23:44:41,245 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:45:12] 2025-11-27 23:44:41,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:45:12] 2025-11-27 23:44:41,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:45:12] 2025-11-27 23:45:06,051 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:45:12] 2025-11-27 23:45:06,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587098683200)>', '<ExcThread(monitor, started 140586602448640)>']
[2025-11-27 18:45:12] 2025-11-27 23:45:07,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:45:12] 2025-11-27 23:45:07,411 | INFO     | [monitor] control thread has ended
[2025-11-27 18:45:12] 2025-11-27 23:45:12,002 | INFO     | all workflow threads have been joined
[2025-11-27 18:45:12] 2025-11-27 23:45:12,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:45:12] 2025-11-27 23:45:12,003 | INFO     | traces error code: 0
[2025-11-27 18:45:12] 2025-11-27 23:45:12,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:45:12] 2025-11-27 23:45:12,142 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:45:12] 2025-11-27 23:45:12,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:45:12] 2025-11-27 23:45:12,162 [wrapper] pilotpid: 714314
[2025-11-27 18:45:12] 2025-11-27 23:45:12,169 [wrapper] Pilot exit status: 0
[2025-11-27 18:45:12] 2025-11-27 23:45:12,253 [wrapper] pandaids: 6891106896
[2025-11-27 18:45:12] 2025-11-27 23:45:12,371 [wrapper] cleanup supervisor_pilot 2373413 714315
[2025-11-27 18:45:12] 2025-11-27 23:45:12,375 [wrapper] Test setup, not cleaning
[2025-11-27 18:45:12] 2025-11-27 23:45:12,378 [wrapper] apfmon messages muted
[2025-11-27 18:45:12] 2025-11-27 23:45:12,380 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:45:12] 2025-11-27 23:45:12,383 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:45:12]  *** Error codes and diagnostics ***
[2025-11-27 18:45:12]     "exeErrorCode": 0,
[2025-11-27 18:45:12]     "exeErrorDiag": "",
[2025-11-27 18:45:12]     "pilotErrorCode": 0,
[2025-11-27 18:45:12]     "pilotErrorDiag": "",
[2025-11-27 18:45:12]  *** Listing of results directory ***
[2025-11-27 18:45:12] total 1332588
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 18:45:12] -rwx------. 1 boincer umatlas     36292 Nov 18 01:58 runpilot2-wrapper.sh
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas       100 Nov 26 21:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:45:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 21:56 run_atlas
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas       105 Nov 26 21:56 job.xml
[2025-11-27 18:45:12] -rw-r--r--. 2 boincer umatlas 409603981 Nov 26 21:56 EVNT.47483658._000280.pool.root.1
[2025-11-27 18:45:12] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 21:56 start_atlas.sh
[2025-11-27 18:45:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 21:56 shared
[2025-11-27 18:45:12] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 21:56 input.tar.gz
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas         0 Nov 26 21:56 boinc_lockfile
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas      2770 Nov 26 21:56 pandaJob.out
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas    991554 Nov 26 21:56 agis_schedconf.cvmfs.json
[2025-11-27 18:45:12] drwx------. 5 boincer umatlas      4096 Nov 26 21:56 pilot3
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas       533 Nov 27 18:34 boinc_task_state.xml
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas 927267007 Nov 27 18:43 HITS.47483661._002491.pool.root.1
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas      1067 Nov 27 18:43 memory_monitor_summary.json
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:43 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas   2308035 Nov 27 18:43 log.47483661._002491.job.log.tgz.1
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas      8624 Nov 27 18:44 heartbeat.json
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas        95 Nov 27 18:44 pilot_heartbeat.json
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas      6950 Nov 27 18:45 init_data.xml
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:45 boinc_mmap_file
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas        29 Nov 27 18:45 wrapper_checkpoint.txt
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas      4824 Nov 27 18:45 pilotlog.txt
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas   9582084 Nov 27 18:45 log.47483661._002491.job.log.1
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas       353 Nov 27 18:45 output.list
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:45 runtime_log
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas  11909120 Nov 27 18:45 result.tar.gz
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 18:45 runtime_log.err
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas       664 Nov 27 18:45 1dUMDmgqUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDmz7qMDmzaRlJm.diag
[2025-11-27 18:45:12] -rw-r--r--. 1 boincer umatlas     21337 Nov 27 18:45 stderr.txt
[2025-11-27 18:45:12] HITS file was successfully produced:
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas 927267007 Nov 27 18:43 shared/HITS.pool.root.1
[2025-11-27 18:45:12]  *** Contents of shared directory: ***
[2025-11-27 18:45:12] total 1317776
[2025-11-27 18:45:12] -rw-r--r--. 2 boincer umatlas 409603981 Nov 26 21:56 ATLAS.root_0
[2025-11-27 18:45:12] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 21:56 start_atlas.sh
[2025-11-27 18:45:12] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 21:56 input.tar.gz
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas 927267007 Nov 27 18:43 HITS.pool.root.1
[2025-11-27 18:45:12] -rw-------. 1 boincer umatlas  11909120 Nov 27 18:45 result.tar.gz
18:45:13 (710578): run_atlas exited; CPU time 207534.022764
18:45:13 (710578): called boinc_finish(0)

</stderr_txt>
]]>

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