Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:33 (3414517): wrapper (7.7.26015): starting
00:04:33 (3414517): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:33] Arguments: --nthreads 9
[2025-11-26 00:04:33] Threads: 9
[2025-11-26 00:04:33] Checking for CVMFS
[2025-11-26 00:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:35] 2.13.2.0 8902 35399 302504 153309 3 326 36128185 40960000 23627 16776704 0 70648900 99.614 73520149 35938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:35] CVMFS is ok
[2025-11-26 00:04:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:35] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:35] Checking for apptainer binary...
[2025-11-26 00:04:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:35] Running /usr/bin/apptainer --version
[2025-11-26 00:04:36] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:37] c-211-35-2.aglt2.org
[2025-11-26 00:04:37] apptainer works
[2025-11-26 00:04:37] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:37] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:37] Starting ATLAS job with PandaID=6896716169
[2025-11-26 00:04:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:02:18]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:02:18] 2025-11-27 01:50:03,357 | INFO     | monitor loop #4276: job 0:6896716169 is in state 'finished'
[2025-11-27 00:02:18] 2025-11-27 01:50:03,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:02:18] 2025-11-27 01:50:05,093 | INFO     | time since job start (74660s) is within the limit (172800.0s)
[2025-11-27 00:02:18] 2025-11-27 01:50:05,861 | INFO     | monitor loop #4277: job 0:6896716169 is in state 'finished'
[2025-11-27 00:02:18] 2025-11-27 01:50:05,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:02:18] 2025-11-27 01:50:07,100 | INFO     | time since job start (74662s) is within the limit (172800.0s)
[2025-11-27 00:02:18] 2025-11-27 01:50:08,366 | INFO     | monitor loop #4278: job 0:6896716169 is in state 'finished'
[2025-11-27 00:02:18] 2025-11-27 01:50:08,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:02:18] 2025-11-27 01:50:09,108 | INFO     | time since job start (74664s) is within the limit (172800.0s)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,234 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 00:02:18] 2025-11-27 01:50:10,302 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2622.280145833334
[2025-11-27 00:02:18] 2025-11-27 01:50:10,321 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6896716169/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,322 | INFO     | extracted standard info from prmon json
[2025-11-27 00:02:18] 2025-11-27 01:50:10,322 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:02:18] 2025-11-27 01:50:10,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:02:18] 2025-11-27 01:50:10,344 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:02:18] 2025-11-27 01:50:10,346 | INFO     | sum of square deviations: 565885482803.3264
[2025-11-27 00:02:18] 2025-11-27 01:50:10,378 | INFO     | sum of deviations: 4098723114471.578
[2025-11-27 00:02:18] 2025-11-27 01:50:10,378 | INFO     | mean x: 1764170931.2855973
[2025-11-27 00:02:18] 2025-11-27 01:50:10,378 | INFO     | mean y: 3056572.1014729952
[2025-11-27 00:02:18] 2025-11-27 01:50:10,378 | INFO     | intersect: -12774878882.4686
[2025-11-27 00:02:18] 2025-11-27 01:50:10,380 | INFO     | chi2: 15.370635904686678
[2025-11-27 00:02:18] 2025-11-27 01:50:10,382 | INFO     | sum of square deviations: 558970532888.5328
[2025-11-27 00:02:18] 2025-11-27 01:50:10,412 | INFO     | sum of deviations: 4526420589069.503
[2025-11-27 00:02:18] 2025-11-27 01:50:10,413 | INFO     | mean x: 1764170778.8110106
[2025-11-27 00:02:18] 2025-11-27 01:50:10,413 | INFO     | mean y: 3066001.0673788004
[2025-11-27 00:02:18] 2025-11-27 01:50:10,413 | INFO     | intersect: -14282801439.170912
[2025-11-27 00:02:18] 2025-11-27 01:50:10,414 | INFO     | chi2: 12.218287608175784
[2025-11-27 00:02:18] 2025-11-27 01:50:10,415 | INFO     | current chi2=12.218287608175784 (change=20.50889967115614 %)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,415 | INFO     | right removable region: 1216
[2025-11-27 00:02:18] 2025-11-27 01:50:10,416 | INFO     | sum of square deviations: 558962342824.783
[2025-11-27 00:02:18] 2025-11-27 01:50:10,447 | INFO     | sum of deviations: 3590816249685.8574
[2025-11-27 00:02:18] 2025-11-27 01:50:10,447 | INFO     | mean x: 1764171083.850452
[2025-11-27 00:02:18] 2025-11-27 01:50:10,447 | INFO     | mean y: 3067762.526705012
[2025-11-27 00:02:18] 2025-11-27 01:50:10,447 | INFO     | intersect: -11330100341.611357
[2025-11-27 00:02:18] 2025-11-27 01:50:10,449 | INFO     | chi2: 11.465567551781904
[2025-11-27 00:02:18] 2025-11-27 01:50:10,449 | INFO     | current chi2=11.465567551781904 (change=25.40602989440453 %)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,451 | INFO     | sum of square deviations: 552095808548.4163
[2025-11-27 00:02:18] 2025-11-27 01:50:10,481 | INFO     | sum of deviations: 3182454945987.137
[2025-11-27 00:02:18] 2025-11-27 01:50:10,481 | INFO     | mean x: 1764171236.4158416
[2025-11-27 00:02:18] 2025-11-27 01:50:10,481 | INFO     | mean y: 3076832.305280528
[2025-11-27 00:02:18] 2025-11-27 01:50:10,482 | INFO     | intersect: -10166164429.752737
[2025-11-27 00:02:18] 2025-11-27 01:50:10,483 | INFO     | chi2: 9.039292902867123
[2025-11-27 00:02:18] 2025-11-27 01:50:10,483 | INFO     | current chi2=9.039292902867123 (change=21.161400322810056 %)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,483 | INFO     | left removable region: 20
[2025-11-27 00:02:18] 2025-11-27 01:50:10,485 | INFO     | sum of square deviations: 530513900368.8256
[2025-11-27 00:02:18] 2025-11-27 01:50:10,515 | INFO     | sum of deviations: 3453945472163.461
[2025-11-27 00:02:18] 2025-11-27 01:50:10,515 | INFO     | mean x: 1764171358.542642
[2025-11-27 00:02:18] 2025-11-27 01:50:10,515 | INFO     | mean y: 3093635.4615384615
[2025-11-27 00:02:18] 2025-11-27 01:50:10,515 | INFO     | intersect: -11482659464.92392
[2025-11-27 00:02:18] 2025-11-27 01:50:10,517 | INFO     | chi2: 5.086411854078972
[2025-11-27 00:02:18] 2025-11-27 01:50:10,517 | INFO     | current memory leak: 6.51 B/s (using 1196 data points, chi2=5.09)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,518 | INFO     | could have reported an average CPU frequency of 2639 MHz (44 samples)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,518 | INFO     | ..............................
[2025-11-27 00:02:18] 2025-11-27 01:50:10,518 | INFO     | . Timing measurements:
[2025-11-27 00:02:18] 2025-11-27 01:50:10,518 | INFO     | . get job = 0 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,518 | INFO     | . initial setup = 7 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,519 | INFO     | . payload setup = 41 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,519 | INFO     | . stage-in = 0 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,519 | INFO     | . payload execution = 74525 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,519 | INFO     | . stage-out = 7 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,519 | INFO     | . log creation = 1 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,519 | INFO     | ..............................
[2025-11-27 00:02:18] 2025-11-27 01:50:10,703 | INFO     | 
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | job summary report
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | --------------------------------------------------
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | PanDA job id: 6896716169
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | task id: 47556161
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | errors: (none)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | pilot state: finished 
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | transexitcode: 0
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | exeerrorcode: 0
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | exeerrordiag: 
[2025-11-27 00:02:18] 2025-11-27 01:50:10,704 | INFO     | exitcode: 0
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | exitmsg: OK
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | cpuconsumptiontime: 259722 s
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | nevents: 1000
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | neventsw: 0
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | pid: 3439655
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | pgrp: 3439655
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | corecount: 9
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | event service: False
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | sizes: {0: 2283986, 1: 2284042, 2: 2284269, 3: 2284269, 13: 2284297, 24: 2284353, 30: 2284771, 35: 2284799, 74572: 2343543, 74579: 2352537, 74580: 2352593, 74603: 
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | --------------------------------------------------
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | 
[2025-11-27 00:02:18] 2025-11-27 01:50:10,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:02:18] 2025-11-27 01:50:10,743 | INFO     | job 6896716169 has completed (purged errors)
[2025-11-27 00:02:18] 2025-11-27 01:50:10,743 | INFO     | overall cleanup function is called
[2025-11-27 00:02:18] 2025-11-27 01:50:11,764 | INFO     | --- collectZombieJob: --- 10, [3439655]
[2025-11-27 00:02:18] 2025-11-27 01:50:11,765 | INFO     | zombie collector waiting for pid 3439655
[2025-11-27 00:02:18] 2025-11-27 01:50:11,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:02:18] 2025-11-27 01:50:11,765 | INFO     | collected zombie processes
[2025-11-27 00:02:18] 2025-11-27 01:50:11,765 | INFO     | will attempt to kill all subprocesses of pid=3439655
[2025-11-27 00:02:18] 2025-11-27 01:50:12,873 | INFO     | process IDs to be killed: [3439655] (in reverse order)
[2025-11-27 00:02:18] 2025-11-27 01:50:13,183 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:02:18] 2025-11-27 01:50:13,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:02:18] 2025-11-27 01:50:13,213 | INFO     | did not find any defunct processes belonging to 3439655
[2025-11-27 00:02:18] 2025-11-27 01:50:13,249 | INFO     | did not find any defunct processes belonging to 3439655
[2025-11-27 00:02:18] 2025-11-27 01:50:13,253 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:02:18] 2025-11-27 01:50:13,253 | INFO     | ready for new job
[2025-11-27 00:02:18] 2025-11-27 01:50:13,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:02:18] 2025-11-27 01:50:13,268 | INFO     | ***************************************
[2025-11-27 00:02:18] 2025-11-27 01:50:13,269 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:02:18] 2025-11-27 01:50:13,269 | INFO     | ***************************************
[2025-11-27 00:02:18] 2025-11-27 01:50:13,269 | INFO     | 
[2025-11-27 00:02:18] 2025-11-27 01:50:13,280 | INFO     | architecture information:
[2025-11-27 00:02:18] 2025-11-27 01:50:13,285 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:02:18] 2025-11-27 01:50:13,403 | INFO     | cat /etc/os-release:
[2025-11-27 00:02:18] NAME="CentOS Linux"
[2025-11-27 00:02:18] VERSION="7 (Core)"
[2025-11-27 00:02:18] ID="centos"
[2025-11-27 00:02:18] ID_LIKE="rhel fedora"
[2025-11-27 00:02:18] VERSION_ID="7"
[2025-11-27 00:02:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:02:18] ANSI_COLOR="0;31"
[2025-11-27 00:02:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:02:18] HOME_URL="https://www.centos.org/"
[2025-11-27 00:02:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:02:18] 
[2025-11-27 00:02:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:02:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:02:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:02:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:02:18] 
[2025-11-27 00:02:18] 2025-11-27 01:50:13,403 | INFO     | ***************************************
[2025-11-27 00:02:18] 2025-11-27 01:50:13,907 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 00:02:18] 2025-11-27 01:50:13,973 | INFO     | sufficient remaining disk space (114293735424 B)
[2025-11-27 00:02:18] 2025-11-27 01:50:13,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:02:18] 2025-11-27 01:50:13,973 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:02:18] 2025-11-27 01:50:13,974 | INFO     | update_server=False
[2025-11-27 00:02:18] 2025-11-27 01:50:13,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:02:18] 2025-11-27 01:50:13,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:02:18] 2025-11-27 01:50:14,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:02:18] 2025-11-27 01:50:14,411 | INFO     | aborting loop
[2025-11-27 00:02:18] 2025-11-27 01:50:14,442 | INFO     | all job control threads have been joined
[2025-11-27 00:02:18] 2025-11-27 01:50:14,815 | INFO     | all data control threads have been joined
[2025-11-27 00:02:18] 2025-11-27 01:50:14,980 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,039 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,193 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,248 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,249 | INFO     | [job] validate thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,356 | INFO     | all payload control threads have been joined
[2025-11-27 00:02:18] 2025-11-27 01:50:15,417 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,448 | INFO     | [job] control thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,559 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:02:18] 2025-11-27 01:50:15,823 | INFO     | [data] control thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:15,981 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:16,362 | INFO     | [payload] control thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:16,413 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:16,426 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:16,726 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:16,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:02:18] 2025-11-27 01:50:20,752 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:02:18] 2025-11-27 01:50:42,858 | INFO     | PID=3421061 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:02:18] 2025-11-27 01:50:42,859 | INFO     | .. there are 28 such processes running
[2025-11-27 00:02:18] 2025-11-27 01:50:42,859 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:02:18] 2025-11-27 01:50:42,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:02:18] 2025-11-27 01:50:42,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:02:18] 2025-11-27 01:50:46,038 [wrapper] supervise_pilot (15 min periods counter: 84)
[2025-11-27 00:02:18] 2025-11-27 01:50:59,965 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:02:18] 2025-11-27 01:51:01,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540267616064)>', '<ExcThread(monitor, started 140539785639680)>']
[2025-11-27 00:02:18] 2025-11-27 01:51:02,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:02:18] 2025-11-27 01:51:02,027 | INFO     | [monitor] control thread has ended
[2025-11-27 00:02:18] 2025-11-27 01:51:06,752 | INFO     | all workflow threads have been joined
[2025-11-27 00:02:18] 2025-11-27 01:51:06,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:02:18] 2025-11-27 01:51:06,753 | INFO     | traces error code: 0
[2025-11-27 00:02:18] 2025-11-27 01:51:06,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:02:18] 2025-11-27 01:51:07,126 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:02:18] 2025-11-27 01:51:07,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:02:18] 2025-11-27 01:51:07,151 [wrapper] pilotpid: 3421061
[2025-11-27 00:02:18] 2025-11-27 01:51:07,169 [wrapper] Pilot exit status: 0
[2025-11-27 00:02:18] 2025-11-27 01:51:07,224 [wrapper] pandaids: 6896716169
[2025-11-27 00:02:18] 2025-11-27 01:51:07,313 [wrapper] cleanup supervisor_pilot 2444160 3421062
[2025-11-27 00:02:18] 2025-11-27 01:51:07,321 [wrapper] Test setup, not cleaning
[2025-11-27 00:02:18] 2025-11-27 01:51:07,340 [wrapper] apfmon messages muted
[2025-11-27 00:02:18] 2025-11-27 01:51:07,366 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:02:18] 2025-11-27 01:51:07,384 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:02:18]  *** Error codes and diagnostics ***
[2025-11-27 00:02:18]     "exeErrorCode": 0,
[2025-11-27 00:02:18]     "exeErrorDiag": "",
[2025-11-27 00:02:18]     "pilotErrorCode": 0,
[2025-11-27 00:02:18]     "pilotErrorDiag": "",
[2025-11-27 00:02:18]  *** Listing of results directory ***
[2025-11-27 00:02:18] total 1316148
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 02:04 pilot3.tar.gz
[2025-11-27 00:02:18] -rwx------. 1 boincer umatlas     36292 Nov 25 02:44 runpilot2-wrapper.sh
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 02:44 queuedata.json
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:02:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 00:02:18] -rw-r--r--. 2 boincer umatlas 409341691 Nov 26 00:04 EVNT.47483658._002135.pool.root.1
[2025-11-27 00:02:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-27 00:02:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 00:02:18] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 00:04 input.tar.gz
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:04 pandaJob.out
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 00:02:18] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas       531 Nov 26 20:29 boinc_task_state.xml
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas 911335013 Nov 26 20:48 HITS.47556161._001183.pool.root.1
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas      1072 Nov 26 20:49 memory_monitor_summary.json
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas   2391472 Nov 26 20:49 log.47556161._001183.job.log.tgz.1
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas        95 Nov 26 20:50 pilot_heartbeat.json
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas      8622 Nov 26 20:50 heartbeat.json
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas      4825 Nov 26 20:51 pilotlog.txt
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas   9176195 Nov 26 20:51 log.47556161._001183.job.log.1
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas       353 Nov 26 20:51 output.list
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:51 runtime_log
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas  11591680 Nov 26 20:51 result.tar.gz
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 20:51 runtime_log.err
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas       664 Nov 26 20:51 d5rKDm8t2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLFMKDmVzXJ5m.diag
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas      6883 Nov 27 00:02 init_data.xml
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas        28 Nov 27 00:02 wrapper_checkpoint.txt
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 00:02 boinc_mmap_file
[2025-11-27 00:02:18] -rw-r--r--. 1 boincer umatlas     21579 Nov 27 00:02 stderr.txt
[2025-11-27 00:02:18] HITS file was successfully produced:
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas 911335013 Nov 26 20:48 shared/HITS.pool.root.1
[2025-11-27 00:02:18]  *** Contents of shared directory: ***
[2025-11-27 00:02:18] total 1301648
[2025-11-27 00:02:18] -rw-r--r--. 2 boincer umatlas 409341691 Nov 26 00:04 ATLAS.root_0
[2025-11-27 00:02:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-27 00:02:18] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 00:04 input.tar.gz
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas 911335013 Nov 26 20:48 HITS.pool.root.1
[2025-11-27 00:02:18] -rw-------. 1 boincer umatlas  11591680 Nov 26 20:51 result.tar.gz
00:02:40 (3414517): run_atlas exited; CPU time 261783.219101
00:02:40 (3414517): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN