Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:22 (544158): wrapper (7.7.26015): starting
08:30:22 (544158): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:30:22] Arguments: --nthreads 8
[2025-11-26 08:30:22] Threads: 8
[2025-11-26 08:30:22] Checking for CVMFS
[2025-11-26 08:30:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:30:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:30:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:30:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:30:22] 2.13.3.0 11754 30067 103908 153323 1 59 24111835 32935936 2460 16776704 0 160811446 99.581 166137817 6899 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:30:22] CVMFS is ok
[2025-11-26 08:30:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:30:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:30:22] Further information can be found at the LHC@home message board.
[2025-11-26 08:30:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:30:22] Checking for apptainer binary...
[2025-11-26 08:30:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:30:22] Running /usr/bin/apptainer --version
[2025-11-26 08:30:22] apptainer version 1.4.4-1.el9
[2025-11-26 08:30:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:30:22] c7-2-38.aglt2.org
[2025-11-26 08:30:22] apptainer works
[2025-11-26 08:30:22] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:30:22] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:30:22] Starting ATLAS job with PandaID=6896715568
[2025-11-26 08:30:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:29:22]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:29:22] 2025-11-27 23:28:38,304 | INFO     | monitor loop #6691: job 0:6896715568 is in state 'finished'
[2025-11-27 18:29:22] 2025-11-27 23:28:38,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:29:22] 2025-11-27 23:28:38,731 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:29:22] 2025-11-27 23:28:38,759 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3121.0491354166684
[2025-11-27 18:29:22] 2025-11-27 23:28:38,788 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6896715568/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:29:22] 2025-11-27 23:28:38,789 | INFO     | extracted standard info from prmon json
[2025-11-27 18:29:22] 2025-11-27 23:28:38,793 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:29:22] 2025-11-27 23:28:38,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:29:22] 2025-11-27 23:28:38,814 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:29:22] 2025-11-27 23:28:38,816 | INFO     | sum of square deviations: 2499252293120.544
[2025-11-27 18:29:22] 2025-11-27 23:28:38,899 | INFO     | sum of deviations: 6055576963115.492
[2025-11-27 18:29:22] 2025-11-27 23:28:38,900 | INFO     | mean x: 1764224973.6877806
[2025-11-27 18:29:22] 2025-11-27 23:28:38,900 | INFO     | mean y: 2946162.8778054863
[2025-11-27 18:29:22] 2025-11-27 23:28:38,900 | INFO     | intersect: -4271692351.1385455
[2025-11-27 18:29:22] 2025-11-27 23:28:38,902 | INFO     | chi2: 5.987210025727538
[2025-11-27 18:29:22] 2025-11-27 23:28:38,904 | INFO     | sum of square deviations: 2480601775516.2715
[2025-11-27 18:29:22] 2025-11-27 23:28:38,990 | INFO     | sum of deviations: 6800391779927.374
[2025-11-27 18:29:22] 2025-11-27 23:28:38,991 | INFO     | mean x: 1764224821.192
[2025-11-27 18:29:22] 2025-11-27 23:28:38,991 | INFO     | mean y: 2952253.1865
[2025-11-27 18:29:22] 2025-11-27 23:28:38,991 | INFO     | intersect: -4833543507.799148
[2025-11-27 18:29:22] 2025-11-27 23:28:38,992 | INFO     | chi2: 2.3931208188980464
[2025-11-27 18:29:22] 2025-11-27 23:28:38,993 | INFO     | current chi2=2.3931208188980464 (change=60.029449299179284 %)
[2025-11-27 18:29:22] 2025-11-27 23:28:38,994 | INFO     | sum of square deviations: 2462044282911.921
[2025-11-27 18:29:22] 2025-11-27 23:28:39,072 | INFO     | sum of deviations: 7107401554039.448
[2025-11-27 18:29:22] 2025-11-27 23:28:39,073 | INFO     | mean x: 1764224668.6962407
[2025-11-27 18:29:22] 2025-11-27 23:28:39,073 | INFO     | mean y: 2954775.365413534
[2025-11-27 18:29:22] 2025-11-27 23:28:39,073 | INFO     | intersect: -5089989018.942031
[2025-11-27 18:29:22] 2025-11-27 23:28:39,075 | INFO     | chi2: 1.6552069210783307
[2025-11-27 18:29:22] 2025-11-27 23:28:39,075 | INFO     | current chi2=1.6552069210783307 (change=30.83479496699631 %)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,077 | INFO     | sum of square deviations: 2443579582744.998
[2025-11-27 18:29:22] 2025-11-27 23:28:39,158 | INFO     | sum of deviations: 7222226777601.932
[2025-11-27 18:29:22] 2025-11-27 23:28:39,158 | INFO     | mean x: 1764224516.2005024
[2025-11-27 18:29:22] 2025-11-27 23:28:39,158 | INFO     | mean y: 2955722.8547738693
[2025-11-27 18:29:22] 2025-11-27 23:28:39,158 | INFO     | intersect: -5211373956.676989
[2025-11-27 18:29:22] 2025-11-27 23:28:39,160 | INFO     | chi2: 1.4692212809679703
[2025-11-27 18:29:22] 2025-11-27 23:28:39,160 | INFO     | current chi2=1.4692212809679703 (change=11.236398165203104 %)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,160 | INFO     | right removable region: 1989
[2025-11-27 18:29:22] 2025-11-27 23:28:39,162 | INFO     | sum of square deviations: 2480599711276.271
[2025-11-27 18:29:22] 2025-11-27 23:28:39,167 | INFO     | time since job start (122290s) is within the limit (172800.0s)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,234 | INFO     | sum of deviations: 5729428414632.226
[2025-11-27 18:29:22] 2025-11-27 23:28:39,234 | INFO     | mean x: 1764225126.192
[2025-11-27 18:29:22] 2025-11-27 23:28:39,234 | INFO     | mean y: 2948826.114
[2025-11-27 18:29:22] 2025-11-27 23:28:39,234 | INFO     | intersect: -4071872888.112513
[2025-11-27 18:29:22] 2025-11-27 23:28:39,236 | INFO     | chi2: 4.750071244607633
[2025-11-27 18:29:22] 2025-11-27 23:28:39,236 | INFO     | current chi2=4.750071244607633 (change=20.66302628108613 %)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,236 | INFO     | left removable region: 10
[2025-11-27 18:29:22] 2025-11-27 23:28:39,238 | INFO     | sum of square deviations: 2403278597209.512
[2025-11-27 18:29:22] 2025-11-27 23:28:39,309 | INFO     | sum of deviations: 6843278559523.851
[2025-11-27 18:29:22] 2025-11-27 23:28:39,309 | INFO     | mean x: 1764224790.7099545
[2025-11-27 18:29:22] 2025-11-27 23:28:39,309 | INFO     | mean y: 2958714.0833754423
[2025-11-27 18:29:22] 2025-11-27 23:28:39,309 | INFO     | intersect: -5020629353.677119
[2025-11-27 18:29:22] 2025-11-27 23:28:39,311 | INFO     | chi2: 0.22274087329345282
[2025-11-27 18:29:22] 2025-11-27 23:28:39,311 | INFO     | current memory leak: 2.85 B/s (using 1979 data points, chi2=0.22)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | could have reported an average CPU frequency of 3135 MHz (70 samples)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | ..............................
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | . Timing measurements:
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | . get job = 0 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | . initial setup = 2 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | . payload setup = 3 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | . stage-in = 0 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,314 | INFO     | . payload execution = 122253 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,315 | INFO     | . stage-out = 3 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,315 | INFO     | . log creation = 1 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,315 | INFO     | ..............................
[2025-11-27 18:29:22] 2025-11-27 23:28:39,406 | INFO     | 
[2025-11-27 18:29:22] 2025-11-27 23:28:39,406 | INFO     | job summary report
[2025-11-27 18:29:22] 2025-11-27 23:28:39,406 | INFO     | --------------------------------------------------
[2025-11-27 18:29:22] 2025-11-27 23:28:39,406 | INFO     | PanDA job id: 6896715568
[2025-11-27 18:29:22] 2025-11-27 23:28:39,406 | INFO     | task id: 47556161
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | errors: (none)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | pilot state: finished 
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | transexitcode: 0
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | exeerrorcode: 0
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | exeerrordiag: 
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | exitcode: 0
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | exitmsg: OK
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | cpuconsumptiontime: 214538 s
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | nevents: 1000
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | neventsw: 0
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | pid: 554569
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | pgrp: 554569
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | corecount: 8
[2025-11-27 18:29:22] 2025-11-27 23:28:39,407 | INFO     | event service: False
[2025-11-27 18:29:22] 2025-11-27 23:28:39,408 | INFO     | sizes: {0: 2284265, 3: 2284527, 10: 2284555, 122261: 2365326, 122266: 2374350, 122268: 2374406, 122276: 2374780}
[2025-11-27 18:29:22] 2025-11-27 23:28:39,408 | INFO     | --------------------------------------------------
[2025-11-27 18:29:22] 2025-11-27 23:28:39,408 | INFO     | 
[2025-11-27 18:29:22] 2025-11-27 23:28:39,408 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-27 18:29:22] 2025-11-27 23:28:39,445 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:29:22] 2025-11-27 23:28:39,447 | INFO     | job 6896715568 has completed (purged errors)
[2025-11-27 18:29:22] 2025-11-27 23:28:39,448 | INFO     | overall cleanup function is called
[2025-11-27 18:29:22] 2025-11-27 23:28:40,471 | INFO     | --- collectZombieJob: --- 10, [554569]
[2025-11-27 18:29:22] 2025-11-27 23:28:40,474 | INFO     | zombie collector waiting for pid 554569
[2025-11-27 18:29:22] 2025-11-27 23:28:40,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:29:22] 2025-11-27 23:28:40,475 | INFO     | collected zombie processes
[2025-11-27 18:29:22] 2025-11-27 23:28:40,475 | INFO     | will attempt to kill all subprocesses of pid=554569
[2025-11-27 18:29:22] 2025-11-27 23:28:41,044 | INFO     | process IDs to be killed: [554569] (in reverse order)
[2025-11-27 18:29:22] 2025-11-27 23:28:41,219 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:29:22] 2025-11-27 23:28:41,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:29:22] 2025-11-27 23:28:41,239 | INFO     | did not find any defunct processes belonging to 554569
[2025-11-27 18:29:22] 2025-11-27 23:28:41,260 | INFO     | did not find any defunct processes belonging to 554569
[2025-11-27 18:29:22] 2025-11-27 23:28:41,261 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:29:22] 2025-11-27 23:28:41,261 | INFO     | ready for new job
[2025-11-27 18:29:22] 2025-11-27 23:28:41,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:29:22] 2025-11-27 23:28:41,269 | INFO     | ***************************************
[2025-11-27 18:29:22] 2025-11-27 23:28:41,270 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:29:22] 2025-11-27 23:28:41,270 | INFO     | ***************************************
[2025-11-27 18:29:22] 2025-11-27 23:28:41,270 | INFO     | 
[2025-11-27 18:29:22] 2025-11-27 23:28:41,275 | INFO     | architecture information:
[2025-11-27 18:29:22] 2025-11-27 23:28:41,275 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:29:22] 2025-11-27 23:28:41,301 | INFO     | cat /etc/os-release:
[2025-11-27 18:29:22] NAME="CentOS Linux"
[2025-11-27 18:29:22] VERSION="7 (Core)"
[2025-11-27 18:29:22] ID="centos"
[2025-11-27 18:29:22] ID_LIKE="rhel fedora"
[2025-11-27 18:29:22] VERSION_ID="7"
[2025-11-27 18:29:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:29:22] ANSI_COLOR="0;31"
[2025-11-27 18:29:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:29:22] HOME_URL="https://www.centos.org/"
[2025-11-27 18:29:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:29:22] 
[2025-11-27 18:29:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:29:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:29:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:29:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:29:22] 
[2025-11-27 18:29:22] 2025-11-27 23:28:41,302 | INFO     | ***************************************
[2025-11-27 18:29:22] 2025-11-27 23:28:41,807 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-27 18:29:22] 2025-11-27 23:28:41,840 | INFO     | sufficient remaining disk space (67146612736 B)
[2025-11-27 18:29:22] 2025-11-27 23:28:41,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:29:22] 2025-11-27 23:28:41,841 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:29:22] 2025-11-27 23:28:41,841 | INFO     | update_server=False
[2025-11-27 18:29:22] 2025-11-27 23:28:41,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:29:22] 2025-11-27 23:28:41,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:29:22] 2025-11-27 23:28:41,850 | INFO     | aborting loop
[2025-11-27 18:29:22] 2025-11-27 23:28:41,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:29:22] 2025-11-27 23:28:41,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:29:22] 2025-11-27 23:28:42,036 | INFO     | all job control threads have been joined
[2025-11-27 18:29:22] 2025-11-27 23:28:42,143 | INFO     | all payload control threads have been joined
[2025-11-27 18:29:22] 2025-11-27 23:28:42,304 | INFO     | all data control threads have been joined
[2025-11-27 18:29:22] 2025-11-27 23:28:42,845 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:42,855 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:42,878 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,043 | INFO     | [job] control thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,149 | INFO     | [payload] control thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,310 | INFO     | [data] control thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,446 | INFO     | [job] validate thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,538 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,731 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,839 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:43,946 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:44,002 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:44,090 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:44,242 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:44,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:29:22] 2025-11-27 23:28:45,426 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:28:46,009 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:29:22] 2025-11-27 23:29:12,863 | INFO     | PID=547837 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 18:29:22] 2025-11-27 23:29:12,863 | INFO     | .. there are 25 such processes running
[2025-11-27 18:29:22] 2025-11-27 23:29:12,863 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:29:22] 2025-11-27 23:29:12,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:29:22] 2025-11-27 23:29:12,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:29:22] 2025-11-27 23:29:14,963 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:29:22] 2025-11-27 23:29:16,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774335858496)>', '<ExcThread(monitor, started 139773855389440)>']
[2025-11-27 18:29:22] 2025-11-27 23:29:16,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:29:22] 2025-11-27 23:29:16,886 | INFO     | [monitor] control thread has ended
[2025-11-27 18:29:22] 2025-11-27 23:29:21,491 | INFO     | all workflow threads have been joined
[2025-11-27 18:29:22] 2025-11-27 23:29:21,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:29:22] 2025-11-27 23:29:21,492 | INFO     | traces error code: 0
[2025-11-27 18:29:22] 2025-11-27 23:29:21,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:29:22] 2025-11-27 23:29:21,767 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:29:22] 2025-11-27 23:29:21,775 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:29:22] 2025-11-27 23:29:21,778 [wrapper] pilotpid: 547837
[2025-11-27 18:29:22] 2025-11-27 23:29:21,781 [wrapper] Pilot exit status: 0
[2025-11-27 18:29:22] 2025-11-27 23:29:21,801 [wrapper] pandaids: 6896715568
[2025-11-27 18:29:22] 2025-11-27 23:29:21,924 [wrapper] cleanup supervisor_pilot 2922957 547838
[2025-11-27 18:29:22] 2025-11-27 23:29:21,928 [wrapper] Test setup, not cleaning
[2025-11-27 18:29:22] 2025-11-27 23:29:21,931 [wrapper] apfmon messages muted
[2025-11-27 18:29:22] 2025-11-27 23:29:21,933 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:29:22] 2025-11-27 23:29:21,935 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:29:22]  *** Error codes and diagnostics ***
[2025-11-27 18:29:22]     "exeErrorCode": 0,
[2025-11-27 18:29:22]     "exeErrorDiag": "",
[2025-11-27 18:29:22]     "pilotErrorCode": 0,
[2025-11-27 18:29:22]     "pilotErrorDiag": "",
[2025-11-27 18:29:22]  *** Listing of results directory ***
[2025-11-27 18:29:22] total 1346652
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 02:04 pilot3.tar.gz
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 02:12 queuedata.json
[2025-11-27 18:29:22] -rwx------. 1 boincer umatlas     36292 Nov 25 02:15 runpilot2-wrapper.sh
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:29:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:30 run_atlas
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:30 job.xml
[2025-11-27 18:29:22] -rw-r--r--. 2 boincer umatlas 409691071 Nov 26 08:30 EVNT.47483658._002132.pool.root.1
[2025-11-27 18:29:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:30 start_atlas.sh
[2025-11-27 18:29:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:30 shared
[2025-11-27 18:29:22] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 08:30 input.tar.gz
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:30 boinc_lockfile
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 08:30 pandaJob.out
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas        57 Nov 26 08:30 setup.sh.local
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas    991830 Nov 26 08:30 agis_schedconf.cvmfs.json
[2025-11-27 18:29:22] drwx------. 5 boincer umatlas      4096 Nov 26 08:30 pilot3
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas       534 Nov 27 18:13 boinc_task_state.xml
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas 930801274 Nov 27 18:27 HITS.47556161._001158.pool.root.1
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas      1065 Nov 27 18:28 memory_monitor_summary.json
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas   2753878 Nov 27 18:28 log.47556161._001158.job.log.tgz.1
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas      8610 Nov 27 18:28 heartbeat.json
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas        95 Nov 27 18:28 pilot_heartbeat.json
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 18:28 init_data.xml
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:29 boinc_mmap_file
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas        29 Nov 27 18:29 wrapper_checkpoint.txt
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas      4824 Nov 27 18:29 pilotlog.txt
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas  14524206 Nov 27 18:29 log.47556161._001158.job.log.1
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas       353 Nov 27 18:29 output.list
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:29 runtime_log
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas  17295360 Nov 27 18:29 result.tar.gz
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas      9357 Nov 27 18:29 runtime_log.err
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas       668 Nov 27 18:29 IlCLDmhR2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkEMKDmKdyOMm.diag
[2025-11-27 18:29:22] -rw-r--r--. 1 boincer umatlas     21307 Nov 27 18:29 stderr.txt
[2025-11-27 18:29:22] HITS file was successfully produced:
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas 930801274 Nov 27 18:27 shared/HITS.pool.root.1
[2025-11-27 18:29:22]  *** Contents of shared directory: ***
[2025-11-27 18:29:22] total 1326576
[2025-11-27 18:29:22] -rw-r--r--. 2 boincer umatlas 409691071 Nov 26 08:30 ATLAS.root_0
[2025-11-27 18:29:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:30 start_atlas.sh
[2025-11-27 18:29:22] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 08:30 input.tar.gz
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas 930801274 Nov 27 18:27 HITS.pool.root.1
[2025-11-27 18:29:22] -rw-------. 1 boincer umatlas  17295360 Nov 27 18:29 result.tar.gz
18:29:23 (544158): run_atlas exited; CPU time 216850.127258
18:29:23 (544158): called boinc_finish(0)

</stderr_txt>
]]>

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