Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:22 (3593836): wrapper (7.7.26015): starting
00:04:22 (3593836): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:22] Arguments: --nthreads 9
[2025-11-26 00:04:22] Threads: 9
[2025-11-26 00:04:22] Checking for CVMFS
[2025-11-26 00:04:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:24] 2.13.3.0 11393 29607 335832 153309 1 346 24169990 32935937 17926 16776704 0 89642838 99.381 140863469 40640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:24] CVMFS is ok
[2025-11-26 00:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:24] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:24] Checking for apptainer binary...
[2025-11-26 00:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:24] Running /usr/bin/apptainer --version
[2025-11-26 00:04:24] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:24] c6-5-37-2.aglt2.org
[2025-11-26 00:04:24] apptainer works
[2025-11-26 00:04:25] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:25] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:25] Starting ATLAS job with PandaID=6896714649
[2025-11-26 00:04:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:02:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:02:12] 2025-11-26 23:01:34,350 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:02:12] 2025-11-26 23:01:34,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:02:12] 2025-11-26 23:01:34,366 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:02:12] 2025-11-26 23:01:34,368 | INFO     | sum of square deviations: 365048158471.83887
[2025-11-27 00:02:12] 2025-11-26 23:01:34,391 | INFO     | sum of deviations: 3936654544174.7085
[2025-11-27 00:02:12] 2025-11-26 23:01:34,391 | INFO     | mean x: 1764165875.845644
[2025-11-27 00:02:12] 2025-11-26 23:01:34,392 | INFO     | mean y: 3049228.047348485
[2025-11-27 00:02:12] 2025-11-26 23:01:34,392 | INFO     | intersect: -19021595741.80658
[2025-11-27 00:02:12] 2025-11-26 23:01:34,393 | INFO     | chi2: 11.685848948186093
[2025-11-27 00:02:12] 2025-11-26 23:01:34,394 | INFO     | sum of square deviations: 359887303091.96625
[2025-11-27 00:02:12] 2025-11-26 23:01:34,412 | INFO     | sum of deviations: 4340354118549.3223
[2025-11-27 00:02:12] 2025-11-26 23:01:34,412 | INFO     | mean x: 1764165723.3663177
[2025-11-27 00:02:12] 2025-11-26 23:01:34,412 | INFO     | mean y: 3061156.4329210278
[2025-11-27 00:02:12] 2025-11-26 23:01:34,412 | INFO     | intersect: -21273332585.24857
[2025-11-27 00:02:12] 2025-11-26 23:01:34,413 | INFO     | chi2: 8.08400126090857
[2025-11-27 00:02:12] 2025-11-26 23:01:34,414 | INFO     | current chi2=8.08400126090857 (change=30.822302284136672 %)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,415 | INFO     | sum of square deviations: 354775268367.461
[2025-11-27 00:02:12] 2025-11-26 23:01:34,433 | INFO     | sum of deviations: 4472214820704.687
[2025-11-27 00:02:12] 2025-11-26 23:01:34,433 | INFO     | mean x: 1764165570.8862333
[2025-11-27 00:02:12] 2025-11-26 23:01:34,433 | INFO     | mean y: 3065083.3671128107
[2025-11-27 00:02:12] 2025-11-26 23:01:34,433 | INFO     | intersect: -22235597291.831253
[2025-11-27 00:02:12] 2025-11-26 23:01:34,434 | INFO     | chi2: 7.372529862551301
[2025-11-27 00:02:12] 2025-11-26 23:01:34,434 | INFO     | current chi2=7.372529862551301 (change=8.800980793975114 %)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,435 | INFO     | right removable region: 1045
[2025-11-27 00:02:12] 2025-11-26 23:01:34,436 | INFO     | sum of square deviations: 359884503801.9664
[2025-11-27 00:02:12] 2025-11-26 23:01:34,452 | INFO     | sum of deviations: 3499860497005.514
[2025-11-27 00:02:12] 2025-11-26 23:01:34,453 | INFO     | mean x: 1764166028.3663177
[2025-11-27 00:02:12] 2025-11-26 23:01:34,453 | INFO     | mean y: 3062127.1389153185
[2025-11-27 00:02:12] 2025-11-26 23:01:34,453 | INFO     | intersect: -17153372583.470173
[2025-11-27 00:02:12] 2025-11-26 23:01:34,453 | INFO     | chi2: 7.769612375695555
[2025-11-27 00:02:12] 2025-11-26 23:01:34,453 | INFO     | current chi2=7.769612375695555 (change=33.512640714891546 %)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,454 | INFO     | sum of square deviations: 354769733768.68854
[2025-11-27 00:02:12] 2025-11-26 23:01:34,473 | INFO     | sum of deviations: 3133829922068.003
[2025-11-27 00:02:12] 2025-11-26 23:01:34,474 | INFO     | mean x: 1764166180.8871894
[2025-11-27 00:02:12] 2025-11-26 23:01:34,474 | INFO     | mean y: 3073038.9407265773
[2025-11-27 00:02:12] 2025-11-26 23:01:34,474 | INFO     | intersect: -15580547092.44674
[2025-11-27 00:02:12] 2025-11-26 23:01:34,475 | INFO     | chi2: 5.145824450909094
[2025-11-27 00:02:12] 2025-11-26 23:01:34,475 | INFO     | current chi2=5.145824450909094 (change=33.76986904770231 %)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,476 | INFO     | sum of square deviations: 349705080864.7603
[2025-11-27 00:02:12] 2025-11-26 23:01:34,497 | INFO     | sum of deviations: 2984262282881.3853
[2025-11-27 00:02:12] 2025-11-26 23:01:34,497 | INFO     | mean x: 1764166333.386167
[2025-11-27 00:02:12] 2025-11-26 23:01:34,497 | INFO     | mean y: 3077538.429394813
[2025-11-27 00:02:12] 2025-11-26 23:01:34,497 | INFO     | intersect: -15051708158.234505
[2025-11-27 00:02:12] 2025-11-26 23:01:34,498 | INFO     | chi2: 4.765347747651793
[2025-11-27 00:02:12] 2025-11-26 23:01:34,499 | INFO     | current chi2=4.765347747651793 (change=7.393892016469462 %)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,499 | INFO     | left removable region: 30
[2025-11-27 00:02:12] 2025-11-26 23:01:34,500 | INFO     | sum of square deviations: 324149099448.36346
[2025-11-27 00:02:12] 2025-11-26 23:01:34,518 | INFO     | sum of deviations: 3235836152721.6675
[2025-11-27 00:02:12] 2025-11-26 23:01:34,518 | INFO     | mean x: 1764166455.3940887
[2025-11-27 00:02:12] 2025-11-26 23:01:34,518 | INFO     | mean y: 3102409.178325123
[2025-11-27 00:02:12] 2025-11-26 23:01:34,518 | INFO     | intersect: -17607785930.471046
[2025-11-27 00:02:12] 2025-11-26 23:01:34,519 | INFO     | chi2: 0.22038463022767862
[2025-11-27 00:02:12] 2025-11-26 23:01:34,520 | INFO     | current memory leak: 9.98 B/s (using 1015 data points, chi2=0.22)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | could have reported an average CPU frequency of 2928 MHz (39 samples)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | ..............................
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | . Timing measurements:
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | . get job = 0 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | . initial setup = 5 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | . payload setup = 46 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | . stage-in = 0 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,521 | INFO     | . payload execution = 64409 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,522 | INFO     | . stage-out = 3 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,522 | INFO     | . log creation = 0 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,522 | INFO     | ..............................
[2025-11-27 00:02:12] 2025-11-26 23:01:34,608 | INFO     | 
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | job summary report
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | --------------------------------------------------
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | PanDA job id: 6896714649
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | task id: 47556161
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | errors: (none)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | pilot state: finished 
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | transexitcode: 0
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | exeerrorcode: 0
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | exeerrordiag: 
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | exitcode: 0
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | exitmsg: OK
[2025-11-27 00:02:12] 2025-11-26 23:01:34,609 | INFO     | cpuconsumptiontime: 240828 s
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | nevents: 1000
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | neventsw: 0
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | pid: 3636673
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | pgrp: 3636673
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | corecount: 9
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | event service: False
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | sizes: {0: 2284036, 1: 2284092, 2: 2284319, 3: 2284347, 14: 2284347, 24: 2284375, 32: 2284793, 36: 2284821, 64460: 2339875, 64465: 2348869, 64467: 2348925, 64476: 
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | --------------------------------------------------
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | 
[2025-11-27 00:02:12] 2025-11-26 23:01:34,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:02:12] 2025-11-26 23:01:34,634 | INFO     | job 6896714649 has completed (purged errors)
[2025-11-27 00:02:12] 2025-11-26 23:01:34,634 | INFO     | overall cleanup function is called
[2025-11-27 00:02:12] 2025-11-26 23:01:35,649 | INFO     | --- collectZombieJob: --- 10, [3636673]
[2025-11-27 00:02:12] 2025-11-26 23:01:35,650 | INFO     | zombie collector waiting for pid 3636673
[2025-11-27 00:02:12] 2025-11-26 23:01:35,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:02:12] 2025-11-26 23:01:35,650 | INFO     | collected zombie processes
[2025-11-27 00:02:12] 2025-11-26 23:01:35,650 | INFO     | will attempt to kill all subprocesses of pid=3636673
[2025-11-27 00:02:12] 2025-11-26 23:01:36,069 | INFO     | process IDs to be killed: [3636673] (in reverse order)
[2025-11-27 00:02:12] 2025-11-26 23:01:36,202 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:02:12] 2025-11-26 23:01:36,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:02:12] 2025-11-26 23:01:36,217 | INFO     | did not find any defunct processes belonging to 3636673
[2025-11-27 00:02:12] 2025-11-26 23:01:36,249 | INFO     | did not find any defunct processes belonging to 3636673
[2025-11-27 00:02:12] 2025-11-26 23:01:36,291 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:02:12] 2025-11-26 23:01:36,291 | INFO     | ready for new job
[2025-11-27 00:02:12] 2025-11-26 23:01:36,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:02:12] 2025-11-26 23:01:36,312 | INFO     | ***************************************
[2025-11-27 00:02:12] 2025-11-26 23:01:36,312 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:02:12] 2025-11-26 23:01:36,312 | INFO     | ***************************************
[2025-11-27 00:02:12] 2025-11-26 23:01:36,312 | INFO     | 
[2025-11-27 00:02:12] 2025-11-26 23:01:36,320 | INFO     | architecture information:
[2025-11-27 00:02:12] 2025-11-26 23:01:36,333 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:02:12] 2025-11-26 23:01:36,380 | INFO     | cat /etc/os-release:
[2025-11-27 00:02:12] NAME="CentOS Linux"
[2025-11-27 00:02:12] VERSION="7 (Core)"
[2025-11-27 00:02:12] ID="centos"
[2025-11-27 00:02:12] ID_LIKE="rhel fedora"
[2025-11-27 00:02:12] VERSION_ID="7"
[2025-11-27 00:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:02:12] ANSI_COLOR="0;31"
[2025-11-27 00:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:02:12] HOME_URL="https://www.centos.org/"
[2025-11-27 00:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:02:12] 
[2025-11-27 00:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:02:12] 
[2025-11-27 00:02:12] 2025-11-26 23:01:36,380 | INFO     | ***************************************
[2025-11-27 00:02:12] 2025-11-26 23:01:36,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 00:02:12] 2025-11-26 23:01:36,926 | INFO     | sufficient remaining disk space (70098354176 B)
[2025-11-27 00:02:12] 2025-11-26 23:01:36,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:02:12] 2025-11-26 23:01:36,926 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:02:12] 2025-11-26 23:01:36,926 | INFO     | update_server=False
[2025-11-27 00:02:12] 2025-11-26 23:01:36,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:02:12] 2025-11-26 23:01:36,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:02:12] 2025-11-26 23:01:36,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:02:12] 2025-11-26 23:01:37,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:02:12] 2025-11-26 23:01:37,055 | INFO     | aborting loop
[2025-11-27 00:02:12] 2025-11-26 23:01:37,277 | INFO     | all job control threads have been joined
[2025-11-27 00:02:12] 2025-11-26 23:01:37,624 | INFO     | all payload control threads have been joined
[2025-11-27 00:02:12] 2025-11-26 23:01:37,654 | INFO     | all data control threads have been joined
[2025-11-27 00:02:12] 2025-11-26 23:01:37,932 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,027 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,061 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,093 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,172 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,256 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,283 | INFO     | [job] control thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,339 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,631 | INFO     | [payload] control thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,661 | INFO     | [data] control thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,933 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,935 | INFO     | [job] validate thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:38,935 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:39,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:39,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:02:12] 2025-11-26 23:01:40,644 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:01:40,936 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:02:12] 2025-11-26 23:02:06,812 | INFO     | PID=3605046 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:02:12] 2025-11-26 23:02:06,813 | INFO     | .. there are 25 such processes running
[2025-11-27 00:02:12] 2025-11-26 23:02:06,813 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:02:12] 2025-11-26 23:02:06,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:02:12] 2025-11-26 23:02:06,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:02:12] 2025-11-26 23:02:33,453 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:02:12] 2025-11-26 23:02:33,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621629024064)>', '<ExcThread(monitor, started 140620895078144)>']
[2025-11-27 00:02:12] 2025-11-26 23:02:34,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:02:12] 2025-11-26 23:02:34,060 | INFO     | [monitor] control thread has ended
[2025-11-27 00:02:12] 2025-11-26 23:02:38,867 | INFO     | all workflow threads have been joined
[2025-11-27 00:02:12] 2025-11-26 23:02:38,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:02:12] 2025-11-26 23:02:38,868 | INFO     | traces error code: 0
[2025-11-27 00:02:12] 2025-11-26 23:02:38,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:02:12] 2025-11-26 23:02:39,107 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:02:12] 2025-11-26 23:02:39,109 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:02:12] 2025-11-26 23:02:39,111 [wrapper] pilotpid: 3605046
[2025-11-27 00:02:12] 2025-11-26 23:02:39,113 [wrapper] Pilot exit status: 0
[2025-11-27 00:02:12] 2025-11-26 23:02:39,126 [wrapper] pandaids: 6896714649
[2025-11-27 00:02:12] 2025-11-26 23:02:39,212 [wrapper] cleanup supervisor_pilot 2626216 3605047
[2025-11-27 00:02:12] 2025-11-26 23:02:39,215 [wrapper] Test setup, not cleaning
[2025-11-27 00:02:12] 2025-11-26 23:02:39,226 [wrapper] apfmon messages muted
[2025-11-27 00:02:12] 2025-11-26 23:02:39,266 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:02:12] 2025-11-26 23:02:39,311 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:02:12]  *** Error codes and diagnostics ***
[2025-11-27 00:02:12]     "exeErrorCode": 0,
[2025-11-27 00:02:12]     "exeErrorDiag": "",
[2025-11-27 00:02:12]     "pilotErrorCode": 0,
[2025-11-27 00:02:12]     "pilotErrorDiag": "",
[2025-11-27 00:02:12]  *** Listing of results directory ***
[2025-11-27 00:02:12] total 1333304
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:50 queuedata.json
[2025-11-27 00:02:12] -rwx------. 1 boincer umatlas     36292 Nov 25 01:53 runpilot2-wrapper.sh
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:02:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 00:02:12] -rw-r--r--. 2 boincer umatlas 409411729 Nov 26 00:04 EVNT.47483658._002128.pool.root.1
[2025-11-27 00:02:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-27 00:02:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 00:02:12] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:04 input.tar.gz
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:04 pandaJob.out
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 00:02:12] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas       531 Nov 26 17:51 boinc_task_state.xml
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas 930789261 Nov 26 18:00 HITS.47556161._001112.pool.root.1
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas        95 Nov 26 18:01 pilot_heartbeat.json
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas      1058 Nov 26 18:01 memory_monitor_summary.json
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas   2295892 Nov 26 18:01 log.47556161._001112.job.log.tgz.1
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas      8619 Nov 26 18:01 heartbeat.json
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas      4824 Nov 26 18:02 pilotlog.txt
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas   8290673 Nov 26 18:02 log.47556161._001112.job.log.1
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas       353 Nov 26 18:02 output.list
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:02 runtime_log
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas  10608640 Nov 26 18:02 result.tar.gz
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas       661 Nov 26 18:02 ynsKDmZ61h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsDMKDmlttN5n.diag
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 18:02 runtime_log.err
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 00:02 init_data.xml
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas        28 Nov 27 00:02 wrapper_checkpoint.txt
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 00:02 boinc_mmap_file
[2025-11-27 00:02:12] -rw-r--r--. 1 boincer umatlas     21176 Nov 27 00:02 stderr.txt
[2025-11-27 00:02:12] HITS file was successfully produced:
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas 930789261 Nov 26 18:00 shared/HITS.pool.root.1
[2025-11-27 00:02:12]  *** Contents of shared directory: ***
[2025-11-27 00:02:12] total 1319760
[2025-11-27 00:02:12] -rw-r--r--. 2 boincer umatlas 409411729 Nov 26 00:04 ATLAS.root_0
[2025-11-27 00:02:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-27 00:02:12] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:04 input.tar.gz
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas 930789261 Nov 26 18:00 HITS.pool.root.1
[2025-11-27 00:02:12] -rw-------. 1 boincer umatlas  10608640 Nov 26 18:02 result.tar.gz
00:02:14 (3593836): run_atlas exited; CPU time 242020.864654
00:02:14 (3593836): called boinc_finish(0)

</stderr_txt>
]]>

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