Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:37:26 (874277): wrapper (7.7.26015): starting
09:37:26 (874277): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 09:37:26] Arguments: --nthreads 10
[2025-11-26 09:37:26] Threads: 10
[2025-11-26 09:37:26] Checking for CVMFS
[2025-11-26 09:37:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:37:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:37:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:37:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:37:28] 2.13.2.0 6122 35248 373720 153324 1 179 23868001 40960001 14116 16776704 0 72143174 99.602 78188820 39896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 09:37:28] CVMFS is ok
[2025-11-26 09:37:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:37:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:37:28] Further information can be found at the LHC@home message board.
[2025-11-26 09:37:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:37:28] Checking for apptainer binary...
[2025-11-26 09:37:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:37:28] Running /usr/bin/apptainer --version
[2025-11-26 09:37:29] apptainer version 1.4.4-1.el9
[2025-11-26 09:37:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:37:29] c-210-35-2.aglt2.org
[2025-11-26 09:37:29] apptainer works
[2025-11-26 09:37:29] Set ATHENA_PROC_NUMBER=10
[2025-11-26 09:37:29] Set ATHENA_CORE_NUMBER=10
[2025-11-26 09:37:29] Starting ATLAS job with PandaID=6896715530
[2025-11-26 09:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:28:32]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:28:32] 2025-11-27 08:27:45,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:28:32] 2025-11-27 08:27:46,933 | INFO     | time since job start (64166s) is within the limit (172800.0s)
[2025-11-27 03:28:32] 2025-11-27 08:27:48,146 | INFO     | monitor loop #4149: job 0:6896715530 is in state 'finished'
[2025-11-27 03:28:32] 2025-11-27 08:27:48,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:28:32] 2025-11-27 08:27:48,940 | INFO     | time since job start (64168s) is within the limit (172800.0s)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,652 | INFO     | monitor loop #4150: job 0:6896715530 is in state 'finished'
[2025-11-27 03:28:32] 2025-11-27 08:27:50,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,947 | INFO     | time since job start (64170s) is within the limit (172800.0s)
[2025-11-27 03:28:32] 2025-11-27 08:27:52,955 | INFO     | time since job start (64172s) is within the limit (172800.0s)
[2025-11-27 03:28:32] 2025-11-27 08:27:53,161 | INFO     | monitor loop #4151: job 0:6896715530 is in state 'finished'
[2025-11-27 03:28:32] 2025-11-27 08:27:53,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:28:32] 2025-11-27 08:27:54,962 | INFO     | time since job start (64174s) is within the limit (172800.0s)
[2025-11-27 03:28:32] 2025-11-27 08:27:55,667 | INFO     | monitor loop #4152: job 0:6896715530 is in state 'finished'
[2025-11-27 03:28:32] 2025-11-27 08:27:55,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:28:32] 2025-11-27 08:27:56,969 | INFO     | time since job start (64176s) is within the limit (172800.0s)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,008 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 03:28:32] 2025-11-27 08:27:58,016 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2830.527535714286
[2025-11-27 03:28:32] 2025-11-27 08:27:58,077 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896715530/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,078 | INFO     | extracted standard info from prmon json
[2025-11-27 03:28:32] 2025-11-27 08:27:58,079 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:28:32] 2025-11-27 08:27:58,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:28:32] 2025-11-27 08:27:58,169 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:28:32] 2025-11-27 08:27:58,172 | INFO     | sum of square deviations: 358974986081.62164
[2025-11-27 03:28:32] 2025-11-27 08:27:58,178 | INFO     | monitor loop #4153: job 0:6896715530 is in state 'finished'
[2025-11-27 03:28:32] 2025-11-27 08:27:58,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,199 | INFO     | sum of deviations: 1847648824092.6226
[2025-11-27 03:28:32] 2025-11-27 08:27:58,200 | INFO     | mean x: 1764200020.7485714
[2025-11-27 03:28:32] 2025-11-27 08:27:58,200 | INFO     | mean y: 3205589.081904762
[2025-11-27 03:28:32] 2025-11-27 08:27:58,200 | INFO     | intersect: -9077154380.788319
[2025-11-27 03:28:32] 2025-11-27 08:27:58,201 | INFO     | chi2: 16.95299574609507
[2025-11-27 03:28:32] 2025-11-27 08:27:58,203 | INFO     | sum of square deviations: 353872084888.7212
[2025-11-27 03:28:32] 2025-11-27 08:27:58,230 | INFO     | sum of deviations: 2275312770849.3877
[2025-11-27 03:28:32] 2025-11-27 08:27:58,230 | INFO     | mean x: 1764199868.25933
[2025-11-27 03:28:32] 2025-11-27 08:27:58,230 | INFO     | mean y: 3218366.2421052633
[2025-11-27 03:28:32] 2025-11-27 08:27:58,231 | INFO     | intersect: -11340164347.439701
[2025-11-27 03:28:32] 2025-11-27 08:27:58,232 | INFO     | chi2: 13.113882348646705
[2025-11-27 03:28:32] 2025-11-27 08:27:58,232 | INFO     | current chi2=13.113882348646705 (change=22.64563416959897 %)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,233 | INFO     | right removable region: 1044
[2025-11-27 03:28:32] 2025-11-27 08:27:58,234 | INFO     | sum of square deviations: 353870644678.72156
[2025-11-27 03:28:32] 2025-11-27 08:27:58,262 | INFO     | sum of deviations: 1389694985848.135
[2025-11-27 03:28:32] 2025-11-27 08:27:58,263 | INFO     | mean x: 1764200173.25933
[2025-11-27 03:28:32] 2025-11-27 08:27:58,263 | INFO     | mean y: 3219270.1913875598
[2025-11-27 03:28:32] 2025-11-27 08:27:58,263 | INFO     | intersect: -6925018976.405178
[2025-11-27 03:28:32] 2025-11-27 08:27:58,269 | INFO     | chi2: 13.092598949298395
[2025-11-27 03:28:32] 2025-11-27 08:27:58,269 | INFO     | current chi2=13.092598949298395 (change=22.771177758868212 %)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,269 | INFO     | left removable region: 10
[2025-11-27 03:28:32] 2025-11-27 08:27:58,271 | INFO     | sum of square deviations: 342813838769.7242
[2025-11-27 03:28:32] 2025-11-27 08:27:58,333 | INFO     | sum of deviations: 1679675724285.0754
[2025-11-27 03:28:32] 2025-11-27 08:27:58,333 | INFO     | mean x: 1764200142.7794971
[2025-11-27 03:28:32] 2025-11-27 08:27:58,333 | INFO     | mean y: 3241190.9564796905
[2025-11-27 03:28:32] 2025-11-27 08:27:58,333 | INFO     | intersect: -8640762689.521317
[2025-11-27 03:28:32] 2025-11-27 08:27:58,334 | INFO     | chi2: 7.597731114889208
[2025-11-27 03:28:32] 2025-11-27 08:27:58,347 | INFO     | current memory leak: 4.90 B/s (using 1034 data points, chi2=7.60)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,348 | INFO     | could have reported an average CPU frequency of 2869 MHz (38 samples)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,348 | INFO     | ..............................
[2025-11-27 03:28:32] 2025-11-27 08:27:58,348 | INFO     | . Timing measurements:
[2025-11-27 03:28:32] 2025-11-27 08:27:58,348 | INFO     | . get job = 0 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,348 | INFO     | . initial setup = 4 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,348 | INFO     | . payload setup = 36 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,349 | INFO     | . stage-in = 0 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,349 | INFO     | . payload execution = 64038 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,349 | INFO     | . stage-out = 6 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,349 | INFO     | . log creation = 1 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,349 | INFO     | ..............................
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | 
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | job summary report
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | --------------------------------------------------
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | PanDA job id: 6896715530
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | task id: 47556161
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | errors: (none)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | pilot state: finished 
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | transexitcode: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | exeerrorcode: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:58,861 | INFO     | exeerrordiag: 
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | exitcode: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | exitmsg: OK
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | cpuconsumptiontime: 241342 s
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | nevents: 1000
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | neventsw: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | pid: 887203
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | pgrp: 887203
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | corecount: 10
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | event service: False
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | sizes: {0: 2284092, 1: 2284291, 12: 2284291, 23: 2284319, 25: 2284609, 34: 2284637, 64079: 2340357, 64087: 2349351, 64089: 2349407, 64116: 2349653}
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | --------------------------------------------------
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | 
[2025-11-27 03:28:32] 2025-11-27 08:27:58,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:28:32] 2025-11-27 08:27:58,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:58,950 | INFO     | job 6896715530 has completed (purged errors)
[2025-11-27 03:28:32] 2025-11-27 08:27:58,950 | INFO     | overall cleanup function is called
[2025-11-27 03:28:32] 2025-11-27 08:27:59,979 | INFO     | --- collectZombieJob: --- 10, [887203]
[2025-11-27 03:28:32] 2025-11-27 08:27:59,980 | INFO     | zombie collector waiting for pid 887203
[2025-11-27 03:28:32] 2025-11-27 08:27:59,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:28:32] 2025-11-27 08:27:59,980 | INFO     | collected zombie processes
[2025-11-27 03:28:32] 2025-11-27 08:27:59,980 | INFO     | will attempt to kill all subprocesses of pid=887203
[2025-11-27 03:28:32] 2025-11-27 08:28:00,452 | INFO     | process IDs to be killed: [887203] (in reverse order)
[2025-11-27 03:28:32] 2025-11-27 08:28:00,576 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:28:32] 2025-11-27 08:28:00,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:28:32] 2025-11-27 08:28:00,587 | INFO     | did not find any defunct processes belonging to 887203
[2025-11-27 03:28:32] 2025-11-27 08:28:00,598 | INFO     | did not find any defunct processes belonging to 887203
[2025-11-27 03:28:32] 2025-11-27 08:28:00,607 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:28:32] 2025-11-27 08:28:00,607 | INFO     | ready for new job
[2025-11-27 03:28:32] 2025-11-27 08:28:00,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:28:32] 2025-11-27 08:28:00,616 | INFO     | ***************************************
[2025-11-27 03:28:32] 2025-11-27 08:28:00,616 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:28:32] 2025-11-27 08:28:00,616 | INFO     | ***************************************
[2025-11-27 03:28:32] 2025-11-27 08:28:00,616 | INFO     | 
[2025-11-27 03:28:32] 2025-11-27 08:28:00,619 | INFO     | architecture information:
[2025-11-27 03:28:32] 2025-11-27 08:28:00,630 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:28:32] 2025-11-27 08:28:00,680 | INFO     | cat /etc/os-release:
[2025-11-27 03:28:32] NAME="CentOS Linux"
[2025-11-27 03:28:32] VERSION="7 (Core)"
[2025-11-27 03:28:32] ID="centos"
[2025-11-27 03:28:32] ID_LIKE="rhel fedora"
[2025-11-27 03:28:32] VERSION_ID="7"
[2025-11-27 03:28:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:28:32] ANSI_COLOR="0;31"
[2025-11-27 03:28:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:28:32] HOME_URL="https://www.centos.org/"
[2025-11-27 03:28:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:28:32] 
[2025-11-27 03:28:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:28:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:28:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:28:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:28:32] 
[2025-11-27 03:28:32] 2025-11-27 08:28:00,680 | INFO     | ***************************************
[2025-11-27 03:28:32] 2025-11-27 08:28:01,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:28:32] 2025-11-27 08:28:01,228 | INFO     | sufficient remaining disk space (68323115008 B)
[2025-11-27 03:28:32] 2025-11-27 08:28:01,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:28:32] 2025-11-27 08:28:01,229 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:28:32] 2025-11-27 08:28:01,229 | INFO     | update_server=False
[2025-11-27 03:28:32] 2025-11-27 08:28:01,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:28:32] 2025-11-27 08:28:01,569 | INFO     | all data control threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:28:01,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:28:01,691 | INFO     | aborting loop
[2025-11-27 03:28:32] 2025-11-27 08:28:02,235 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:02,268 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:02,378 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:02,378 | INFO     | all payload control threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:28:02,575 | INFO     | [data] control thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:02,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:28:02,700 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:02,861 | INFO     | all job control threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:28:03,232 | INFO     | [job] validate thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,240 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,259 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,385 | INFO     | [payload] control thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:28:03,706 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,746 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,868 | INFO     | [job] control thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:04,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:28:04,624 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:04,665 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:08,326 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:13,043 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:28:32] 2025-11-27 08:28:13,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038306305856)>', '<ExcThread(monitor, started 140037668726528)>']
[2025-11-27 03:28:32] 2025-11-27 08:28:18,253 | INFO     | all workflow threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:28:18,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:28:32] 2025-11-27 08:28:18,254 | INFO     | traces error code: 0
[2025-11-27 03:28:32] 2025-11-27 08:28:18,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:28:32] 2025-11-27 08:28:31,284 | INFO     | PID=878483 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 03:28:32] 2025-11-27 08:28:31,285 | INFO     | .. there are 19 such processes running
[2025-11-27 03:28:32] 2025-11-27 08:28:31,285 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:28:32] 2025-11-27 08:28:31,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:28:32] 2025-11-27 08:28:31,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:28:32] 2025-11-27 08:28:31,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:28:32] 2025-11-27 08:28:31,285 | INFO     | [monitor] control thread has ended
[2025-11-27 03:28:32] 2025-11-27 08:28:32,037 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:28:32] 2025-11-27 08:28:32,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:28:32] 2025-11-27 08:28:32,067 [wrapper] pilotpid: 878483
[2025-11-27 03:28:32] 2025-11-27 08:28:32,106 [wrapper] Pilot exit status: 0
[2025-11-27 03:28:32] 2025-11-27 08:28:32,123 [wrapper] pandaids: 6896715530
[2025-11-27 03:28:32] 2025-11-27 08:28:32,215 [wrapper] cleanup supervisor_pilot 3610666 878484
[2025-11-27 03:28:32] 2025-11-27 08:28:32,274 [wrapper] Test setup, not cleaning
[2025-11-27 03:28:32] 2025-11-27 08:28:32,315 [wrapper] apfmon messages muted
[2025-11-27 03:28:32] 2025-11-27 08:28:32,376 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:28:32] 2025-11-27 08:28:32,396 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:28:32]  *** Error codes and diagnostics ***
[2025-11-27 03:28:32]     "exeErrorCode": 0,
[2025-11-27 03:28:32]     "exeErrorDiag": "",
[2025-11-27 03:28:32]     "pilotErrorCode": 0,
[2025-11-27 03:28:32]     "pilotErrorDiag": "",
[2025-11-27 03:28:32]  *** Listing of results directory ***
[2025-11-27 03:28:32] total 1318092
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 02:04 pilot3.tar.gz
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 02:06 queuedata.json
[2025-11-27 03:28:32] -rwx------. 1 boincer umatlas     36292 Nov 25 02:07 runpilot2-wrapper.sh
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:28:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:37 run_atlas
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:37 job.xml
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas 408454394 Nov 26 09:37 EVNT.47483658._002130.pool.root.1
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:37 start_atlas.sh
[2025-11-27 03:28:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:37 shared
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 09:37 input.tar.gz
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:37 boinc_lockfile
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 09:37 pandaJob.out
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas        57 Nov 26 09:37 setup.sh.local
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas    992360 Nov 26 09:38 agis_schedconf.cvmfs.json
[2025-11-27 03:28:32] drwx------. 5 boincer umatlas      4096 Nov 26 09:38 pilot3
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:00 boinc_task_state.xml
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 03:19 init_data.xml
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas 915558185 Nov 27 03:25 HITS.47556161._001139.pool.root.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas      1060 Nov 27 03:27 memory_monitor_summary.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:27 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas   2428950 Nov 27 03:27 log.47556161._001139.job.log.tgz.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas        95 Nov 27 03:27 pilot_heartbeat.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas      8636 Nov 27 03:27 heartbeat.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas       822 Nov 27 03:28 pilotlog.txt
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:28 boinc_mmap_file
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas   8466589 Nov 27 03:28 log.47556161._001139.job.log.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas       353 Nov 27 03:28 output.list
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:28 runtime_log
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas  10915840 Nov 27 03:28 result.tar.gz
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:28 wrapper_checkpoint.txt
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas       662 Nov 27 03:28 StGMDmFK2h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyNJKDm1VZkFo.diag
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      9355 Nov 27 03:28 runtime_log.err
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas     21813 Nov 27 03:28 stderr.txt
[2025-11-27 03:28:32] HITS file was successfully produced:
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas 915558185 Nov 27 03:25 shared/HITS.pool.root.1
[2025-11-27 03:28:32]  *** Contents of shared directory: ***
[2025-11-27 03:28:32] total 1304248
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas 408454394 Nov 26 09:37 ATLAS.root_0
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:37 start_atlas.sh
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 09:37 input.tar.gz
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas 915558185 Nov 27 03:25 HITS.pool.root.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas  10915840 Nov 27 03:28 result.tar.gz
03:28:34 (874277): run_atlas exited; CPU time 241963.199528
03:28:34 (874277): called boinc_finish(0)

</stderr_txt>
]]>

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