Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:32 (3286201): wrapper (7.7.26015): starting
00:04:32 (3286201): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:32] Arguments: --nthreads 9
[2025-11-26 00:04:32] Threads: 9
[2025-11-26 00:04:32] Checking for CVMFS
[2025-11-26 00:04:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:33] 2.13.2.0 6969 36268 242948 153309 0 543 32015462 40960000 23721 16776704 0 104107770 99.616 94197801 35788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:33] CVMFS is ok
[2025-11-26 00:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:33] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:33] Checking for apptainer binary...
[2025-11-26 00:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:33] Running /usr/bin/apptainer --version
[2025-11-26 00:04:33] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:34] c-212-14.aglt2.org
[2025-11-26 00:04:34] apptainer works
[2025-11-26 00:04:34] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:34] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:34] Starting ATLAS job with PandaID=6891107020
[2025-11-26 00:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:08:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:08:01] 2025-11-27 18:06:52,862 | INFO     | monitor loop #8331: job 0:6891107020 is in state 'finished'
[2025-11-27 13:08:01] 2025-11-27 18:06:52,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:08:01] 2025-11-27 18:06:54,052 | INFO     | time since job start (133309s) is within the limit (172800.0s)
[2025-11-27 13:08:01] 2025-11-27 18:06:55,372 | INFO     | monitor loop #8332: job 0:6891107020 is in state 'finished'
[2025-11-27 13:08:01] 2025-11-27 18:06:55,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:08:01] 2025-11-27 18:06:56,059 | INFO     | time since job start (133311s) is within the limit (172800.0s)
[2025-11-27 13:08:01] 2025-11-27 18:06:57,505 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:08:01] 2025-11-27 18:06:57,509 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3013.724635416667
[2025-11-27 13:08:01] 2025-11-27 18:06:57,523 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6891107020/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:08:01] 2025-11-27 18:06:57,524 | INFO     | extracted standard info from prmon json
[2025-11-27 13:08:01] 2025-11-27 18:06:57,524 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:08:01] 2025-11-27 18:06:57,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:08:01] 2025-11-27 18:06:57,550 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:08:01] 2025-11-27 18:06:57,552 | INFO     | sum of square deviations: 3234746018116.538
[2025-11-27 13:08:01] 2025-11-27 18:06:57,716 | INFO     | sum of deviations: 20517325131968.28
[2025-11-27 13:08:01] 2025-11-27 18:06:57,716 | INFO     | mean x: 1764200184.2929063
[2025-11-27 13:08:01] 2025-11-27 18:06:57,717 | INFO     | mean y: 3010452.0979405036
[2025-11-27 13:08:01] 2025-11-27 18:06:57,717 | INFO     | intersect: -11186946526.37661
[2025-11-27 13:08:01] 2025-11-27 18:06:57,718 | INFO     | chi2: 14.69559643856204
[2025-11-27 13:08:01] 2025-11-27 18:06:57,720 | INFO     | sum of square deviations: 3212592209805.1997
[2025-11-27 13:08:01] 2025-11-27 18:06:57,903 | INFO     | monitor loop #8333: job 0:6891107020 is in state 'finished'
[2025-11-27 13:08:01] 2025-11-27 18:06:57,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:08:01] 2025-11-27 18:06:57,906 | INFO     | sum of deviations: 21366691514746.574
[2025-11-27 13:08:01] 2025-11-27 18:06:57,906 | INFO     | mean x: 1764200031.798165
[2025-11-27 13:08:01] 2025-11-27 18:06:57,906 | INFO     | mean y: 3016298.6990825688
[2025-11-27 13:08:01] 2025-11-27 18:06:57,906 | INFO     | intersect: -11730535732.799864
[2025-11-27 13:08:01] 2025-11-27 18:06:57,912 | INFO     | chi2: 10.84925117779278
[2025-11-27 13:08:01] 2025-11-27 18:06:57,912 | INFO     | current chi2=10.84925117779278 (change=26.173454591310374 %)
[2025-11-27 13:08:01] 2025-11-27 18:06:57,914 | INFO     | sum of square deviations: 3190538602796.1465
[2025-11-27 13:08:01] 2025-11-27 18:06:58,076 | INFO     | time since job start (133313s) is within the limit (172800.0s)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,097 | INFO     | sum of deviations: 21563836709094.12
[2025-11-27 13:08:01] 2025-11-27 18:06:58,097 | INFO     | mean x: 1764199879.2993104
[2025-11-27 13:08:01] 2025-11-27 18:06:58,098 | INFO     | mean y: 3017660.555862069
[2025-11-27 13:08:01] 2025-11-27 18:06:58,098 | INFO     | intersect: -11920648796.911089
[2025-11-27 13:08:01] 2025-11-27 18:06:58,099 | INFO     | chi2: 10.296896507849203
[2025-11-27 13:08:01] 2025-11-27 18:06:58,100 | INFO     | current chi2=10.296896507849203 (change=5.091177823167984 %)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,100 | INFO     | right removable region: 2174
[2025-11-27 13:08:01] 2025-11-27 18:06:58,105 | INFO     | sum of square deviations: 3212589153705.1895
[2025-11-27 13:08:01] 2025-11-27 18:06:58,287 | INFO     | sum of deviations: 19675368253308.305
[2025-11-27 13:08:01] 2025-11-27 18:06:58,287 | INFO     | mean x: 1764200336.798165
[2025-11-27 13:08:01] 2025-11-27 18:06:58,288 | INFO     | mean y: 3016246.5233944952
[2025-11-27 13:08:01] 2025-11-27 18:06:58,288 | INFO     | intersect: -10801755119.61308
[2025-11-27 13:08:01] 2025-11-27 18:06:58,293 | INFO     | chi2: 11.316156783459743
[2025-11-27 13:08:01] 2025-11-27 18:06:58,294 | INFO     | current chi2=11.316156783459743 (change=22.996274218816087 %)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,294 | INFO     | left removable region: 10
[2025-11-27 13:08:01] 2025-11-27 18:06:58,295 | INFO     | sum of square deviations: 3142372699328.9653
[2025-11-27 13:08:01] 2025-11-27 18:06:58,456 | INFO     | sum of deviations: 20032626290863.62
[2025-11-27 13:08:01] 2025-11-27 18:06:58,457 | INFO     | mean x: 1764200153.8100739
[2025-11-27 13:08:01] 2025-11-27 18:06:58,457 | INFO     | mean y: 3028063.648798521
[2025-11-27 13:08:01] 2025-11-27 18:06:58,457 | INFO     | intersect: -11243748103.642977
[2025-11-27 13:08:01] 2025-11-27 18:06:58,459 | INFO     | chi2: 4.917939010666487
[2025-11-27 13:08:01] 2025-11-27 18:06:58,459 | INFO     | current memory leak: 6.38 B/s (using 2164 data points, chi2=4.92)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,460 | INFO     | could have reported an average CPU frequency of 3051 MHz (76 samples)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | ..............................
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . Timing measurements:
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . get job = 0 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . initial setup = 4 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . payload setup = 14 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . stage-in = 0 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . payload execution = 133235 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . stage-out = 4 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | . log creation = 1 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,461 | INFO     | ..............................
[2025-11-27 13:08:01] 2025-11-27 18:06:58,553 | INFO     | 
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | job summary report
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | --------------------------------------------------
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | PanDA job id: 6891107020
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | task id: 47483661
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | errors: (none)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | pilot state: finished 
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | transexitcode: 0
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | exeerrorcode: 0
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | exeerrordiag: 
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | exitcode: 0
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | exitmsg: OK
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | cpuconsumptiontime: 219053 s
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | nevents: 1000
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | neventsw: 0
[2025-11-27 13:08:01] 2025-11-27 18:06:58,554 | INFO     | pid: 3335113
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | pgrp: 3335113
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | corecount: 9
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | event service: False
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 18: 2284622, 23: 2284650, 133253: 2372039, 133257: 2381033, 133259: 2381089, 133273: 2381335}
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | --------------------------------------------------
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | 
[2025-11-27 13:08:01] 2025-11-27 18:06:58,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 13:08:01] 2025-11-27 18:06:58,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | job 6891107020 has completed (purged errors)
[2025-11-27 13:08:01] 2025-11-27 18:06:58,665 | INFO     | overall cleanup function is called
[2025-11-27 13:08:01] 2025-11-27 18:06:59,695 | INFO     | --- collectZombieJob: --- 10, [3335113]
[2025-11-27 13:08:01] 2025-11-27 18:06:59,696 | INFO     | zombie collector waiting for pid 3335113
[2025-11-27 13:08:01] 2025-11-27 18:06:59,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:08:01] 2025-11-27 18:06:59,696 | INFO     | collected zombie processes
[2025-11-27 13:08:01] 2025-11-27 18:06:59,696 | INFO     | will attempt to kill all subprocesses of pid=3335113
[2025-11-27 13:08:01] 2025-11-27 18:07:00,163 | INFO     | process IDs to be killed: [3335113] (in reverse order)
[2025-11-27 13:08:01] 2025-11-27 18:07:00,300 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:08:01] 2025-11-27 18:07:00,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:08:01] 2025-11-27 18:07:00,319 | INFO     | did not find any defunct processes belonging to 3335113
[2025-11-27 13:08:01] 2025-11-27 18:07:00,337 | INFO     | did not find any defunct processes belonging to 3335113
[2025-11-27 13:08:01] 2025-11-27 18:07:00,339 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:08:01] 2025-11-27 18:07:00,339 | INFO     | ready for new job
[2025-11-27 13:08:01] 2025-11-27 18:07:00,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:08:01] 2025-11-27 18:07:00,348 | INFO     | ***************************************
[2025-11-27 13:08:01] 2025-11-27 18:07:00,348 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:08:01] 2025-11-27 18:07:00,349 | INFO     | ***************************************
[2025-11-27 13:08:01] 2025-11-27 18:07:00,349 | INFO     | 
[2025-11-27 13:08:01] 2025-11-27 18:07:00,354 | INFO     | architecture information:
[2025-11-27 13:08:01] 2025-11-27 18:07:00,355 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:08:01] 2025-11-27 18:07:00,379 | INFO     | cat /etc/os-release:
[2025-11-27 13:08:01] NAME="CentOS Linux"
[2025-11-27 13:08:01] VERSION="7 (Core)"
[2025-11-27 13:08:01] ID="centos"
[2025-11-27 13:08:01] ID_LIKE="rhel fedora"
[2025-11-27 13:08:01] VERSION_ID="7"
[2025-11-27 13:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:08:01] ANSI_COLOR="0;31"
[2025-11-27 13:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:08:01] HOME_URL="https://www.centos.org/"
[2025-11-27 13:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:08:01] 
[2025-11-27 13:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:08:01] 
[2025-11-27 13:08:01] 2025-11-27 18:07:00,379 | INFO     | ***************************************
[2025-11-27 13:08:01] 2025-11-27 18:07:00,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 13:08:01] 2025-11-27 18:07:00,931 | INFO     | sufficient remaining disk space (121139888128 B)
[2025-11-27 13:08:01] 2025-11-27 18:07:00,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:08:01] 2025-11-27 18:07:00,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:08:01] 2025-11-27 18:07:00,931 | INFO     | update_server=False
[2025-11-27 13:08:01] 2025-11-27 18:07:00,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:08:01] 2025-11-27 18:07:00,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:08:01] 2025-11-27 18:07:01,219 | INFO     | all job control threads have been joined
[2025-11-27 13:08:01] 2025-11-27 18:07:01,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:08:01] 2025-11-27 18:07:01,415 | INFO     | aborting loop
[2025-11-27 13:08:01] 2025-11-27 18:07:01,553 | INFO     | all payload control threads have been joined
[2025-11-27 13:08:01] 2025-11-27 18:07:01,640 | INFO     | all data control threads have been joined
[2025-11-27 13:08:01] 2025-11-27 18:07:01,937 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:02,228 | INFO     | [job] control thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:02,421 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:02,559 | INFO     | [payload] control thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:02,679 | INFO     | [data] control thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:02,938 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:02,988 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,014 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,018 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,066 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,096 | INFO     | [job] validate thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,328 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,541 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:03,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:08:01] 2025-11-27 18:07:03,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:08:01] 2025-11-27 18:07:04,572 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:07,854 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:11,728 | INFO     | job.realtimelogging is not enabled
[2025-11-27 13:08:01] 2025-11-27 18:07:12,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:08:01] 2025-11-27 18:07:31,713 | INFO     | PID=3298904 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:08:01] 2025-11-27 18:07:31,714 | INFO     | .. there are 25 such processes running
[2025-11-27 13:08:01] 2025-11-27 18:07:31,714 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:08:01] 2025-11-27 18:07:31,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:08:01] 2025-11-27 18:07:31,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:08:01] 2025-11-27 18:07:54,164 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:08:01] 2025-11-27 18:07:54,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140565069387584)>', '<ExcThread(monitor, started 140564280375040)>']
[2025-11-27 13:08:01] 2025-11-27 18:07:55,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:08:01] 2025-11-27 18:07:55,861 | INFO     | [monitor] control thread has ended
[2025-11-27 13:08:01] 2025-11-27 18:07:59,993 | INFO     | all workflow threads have been joined
[2025-11-27 13:08:01] 2025-11-27 18:07:59,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:08:01] 2025-11-27 18:07:59,999 | INFO     | traces error code: 0
[2025-11-27 13:08:01] 2025-11-27 18:07:59,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:08:01] 2025-11-27 18:08:00,356 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:08:01] 2025-11-27 18:08:00,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:08:01] 2025-11-27 18:08:00,391 [wrapper] pilotpid: 3298904
[2025-11-27 13:08:01] 2025-11-27 18:08:00,423 [wrapper] Pilot exit status: 0
[2025-11-27 13:08:01] 2025-11-27 18:08:00,442 [wrapper] pandaids: 6891107020
[2025-11-27 13:08:01] 2025-11-27 18:08:00,565 [wrapper] cleanup supervisor_pilot 2278815 3298905
[2025-11-27 13:08:01] 2025-11-27 18:08:00,589 [wrapper] Test setup, not cleaning
[2025-11-27 13:08:01] 2025-11-27 18:08:00,606 [wrapper] apfmon messages muted
[2025-11-27 13:08:01] 2025-11-27 18:08:00,634 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:08:01] 2025-11-27 18:08:00,645 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:08:01]  *** Error codes and diagnostics ***
[2025-11-27 13:08:01]     "exeErrorCode": 0,
[2025-11-27 13:08:01]     "exeErrorDiag": "",
[2025-11-27 13:08:01]     "pilotErrorCode": 0,
[2025-11-27 13:08:01]     "pilotErrorDiag": "",
[2025-11-27 13:08:01]  *** Listing of results directory ***
[2025-11-27 13:08:01] total 1343680
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-27 13:08:01] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:08:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 13:08:01] -rw-r--r--. 2 boincer umatlas 410594702 Nov 26 00:04 EVNT.47483658._000286.pool.root.1
[2025-11-27 13:08:01] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 13:08:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 13:08:01] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:04 input.tar.gz
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 13:08:01] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:56 boinc_task_state.xml
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 13:04 init_data.xml
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas 920553329 Nov 27 13:06 HITS.47483661._002552.pool.root.1
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas      1065 Nov 27 13:06 memory_monitor_summary.json
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas   3161596 Nov 27 13:06 log.47483661._002552.job.log.tgz.1
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas        95 Nov 27 13:06 pilot_heartbeat.json
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas      8622 Nov 27 13:06 heartbeat.json
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:07 boinc_mmap_file
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas        29 Nov 27 13:07 wrapper_checkpoint.txt
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas      4897 Nov 27 13:07 pilotlog.txt
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas  17269364 Nov 27 13:08 log.47483661._002552.job.log.1
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas       353 Nov 27 13:08 output.list
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:08 runtime_log
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas  20449280 Nov 27 13:08 result.tar.gz
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas      8705 Nov 27 13:08 runtime_log.err
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas       668 Nov 27 13:08 OMnNDmmtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7SKODmMvFxLo.diag
[2025-11-27 13:08:01] -rw-r--r--. 1 boincer umatlas     21557 Nov 27 13:08 stderr.txt
[2025-11-27 13:08:01] HITS file was successfully produced:
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas 920553329 Nov 27 13:06 shared/HITS.pool.root.1
[2025-11-27 13:08:01]  *** Contents of shared directory: ***
[2025-11-27 13:08:01] total 1320528
[2025-11-27 13:08:01] -rw-r--r--. 2 boincer umatlas 410594702 Nov 26 00:04 ATLAS.root_0
[2025-11-27 13:08:01] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 13:08:01] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:04 input.tar.gz
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas 920553329 Nov 27 13:06 HITS.pool.root.1
[2025-11-27 13:08:01] -rw-------. 1 boincer umatlas  20449280 Nov 27 13:08 result.tar.gz
13:08:03 (3286201): run_atlas exited; CPU time 221492.255080
13:08:03 (3286201): called boinc_finish(0)

</stderr_txt>
]]>

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