Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:27 (1934139): wrapper (7.7.26015): starting
00:04:27 (1934139): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:27] Arguments: --nthreads 9
[2025-11-26 00:04:27] Threads: 9
[2025-11-26 00:04:27] Checking for CVMFS
[2025-11-26 00:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:29] 2.13.3.0 12085 28172 374736 153309 3 243 20962769 25181184 28460 16776704 0 153963590 99.588 161634569 23290 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:29] CVMFS is ok
[2025-11-26 00:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:30] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:30] Checking for apptainer binary...
[2025-11-26 00:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:30] Running /usr/bin/apptainer --version
[2025-11-26 00:04:30] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:30] c-16-38.aglt2.org
[2025-11-26 00:04:30] apptainer works
[2025-11-26 00:04:30] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:30] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:30] Starting ATLAS job with PandaID=6891106037
[2025-11-26 00:04:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:36:16]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:36:16] 2025-11-27 02:35:42,199 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:36:16] 2025-11-27 02:35:42,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:36:16] 2025-11-27 02:35:42,220 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:36:16] 2025-11-27 02:35:42,221 | INFO     | sum of square deviations: 630654924793.0347
[2025-11-26 21:36:16] 2025-11-27 02:35:42,265 | INFO     | sum of deviations: 5289120649914.251
[2025-11-26 21:36:16] 2025-11-27 02:35:42,266 | INFO     | mean x: 1764172271.786109
[2025-11-26 21:36:16] 2025-11-27 02:35:42,266 | INFO     | mean y: 3070793.9344909233
[2025-11-26 21:36:16] 2025-11-27 02:35:42,266 | INFO     | intersect: -14792532357.459631
[2025-11-26 21:36:16] 2025-11-27 02:35:42,268 | INFO     | chi2: 11.400818448195668
[2025-11-26 21:36:16] 2025-11-27 02:35:42,269 | INFO     | sum of square deviations: 623218442989.5215
[2025-11-26 21:36:16] 2025-11-27 02:35:42,368 | INFO     | sum of deviations: 5766883649085.329
[2025-11-26 21:36:16] 2025-11-27 02:35:42,368 | INFO     | mean x: 1764172119.2931855
[2025-11-26 21:36:16] 2025-11-27 02:35:42,368 | INFO     | mean y: 3080590.828843106
[2025-11-26 21:36:16] 2025-11-27 02:35:42,368 | INFO     | intersect: -16321493021.148075
[2025-11-26 21:36:16] 2025-11-27 02:35:42,370 | INFO     | chi2: 7.9255300551851695
[2025-11-26 21:36:16] 2025-11-27 02:35:42,374 | INFO     | current chi2=7.9255300551851695 (change=30.482797430745066 %)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,376 | INFO     | sum of square deviations: 615840659960.8794
[2025-11-26 21:36:16] 2025-11-27 02:35:42,439 | INFO     | sum of deviations: 5975335238700.729
[2025-11-26 21:36:16] 2025-11-27 02:35:42,440 | INFO     | mean x: 1764171966.8003182
[2025-11-26 21:36:16] 2025-11-27 02:35:42,440 | INFO     | mean y: 3084891.692124105
[2025-11-26 21:36:16] 2025-11-27 02:35:42,440 | INFO     | intersect: -17114198207.185354
[2025-11-26 21:36:16] 2025-11-27 02:35:42,442 | INFO     | chi2: 6.649535310945828
[2025-11-26 21:36:16] 2025-11-27 02:35:42,442 | INFO     | current chi2=6.649535310945828 (change=16.09980323529956 %)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,442 | INFO     | right removable region: 1256
[2025-11-26 21:36:16] 2025-11-27 02:35:42,444 | INFO     | sum of square deviations: 623217062559.5217
[2025-11-26 21:36:16] 2025-11-27 02:35:42,495 | INFO     | sum of deviations: 4753970182831.458
[2025-11-26 21:36:16] 2025-11-27 02:35:42,496 | INFO     | mean x: 1764172424.2931855
[2025-11-26 21:36:16] 2025-11-27 02:35:42,496 | INFO     | mean y: 3081765.6933438987
[2025-11-26 21:36:16] 2025-11-27 02:35:42,496 | INFO     | intersect: -13454224855.564781
[2025-11-26 21:36:16] 2025-11-27 02:35:42,498 | INFO     | chi2: 7.385152434693804
[2025-11-26 21:36:16] 2025-11-27 02:35:42,498 | INFO     | current chi2=7.385152434693804 (change=35.222611707648035 %)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,499 | INFO     | sum of square deviations: 615837899100.8795
[2025-11-26 21:36:16] 2025-11-27 02:35:42,595 | INFO     | sum of deviations: 4352816941935.088
[2025-11-26 21:36:16] 2025-11-27 02:35:42,595 | INFO     | mean x: 1764172576.8003182
[2025-11-26 21:36:16] 2025-11-27 02:35:42,596 | INFO     | mean y: 3090053.2871917263
[2025-11-26 21:36:16] 2025-11-27 02:35:42,596 | INFO     | intersect: -12466295627.596018
[2025-11-26 21:36:16] 2025-11-27 02:35:42,602 | INFO     | chi2: 5.258459669107806
[2025-11-26 21:36:16] 2025-11-27 02:35:42,602 | INFO     | current chi2=5.258459669107806 (change=28.796870266282777 %)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,604 | INFO     | sum of square deviations: 608517585372.6625
[2025-11-26 21:36:16] 2025-11-27 02:35:42,692 | INFO     | sum of deviations: 4219893583043.7256
[2025-11-26 21:36:16] 2025-11-27 02:35:42,693 | INFO     | mean x: 1764172729.3035145
[2025-11-26 21:36:16] 2025-11-27 02:35:42,693 | INFO     | mean y: 3092822.1533546327
[2025-11-26 21:36:16] 2025-11-27 02:35:42,693 | INFO     | intersect: -12230935180.849176
[2025-11-26 21:36:16] 2025-11-27 02:35:42,699 | INFO     | chi2: 5.156613909468053
[2025-11-26 21:36:16] 2025-11-27 02:35:42,699 | INFO     | current chi2=5.156613909468053 (change=1.9367983411201641 %)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,699 | INFO     | left removable region: 30
[2025-11-26 21:36:16] 2025-11-27 02:35:42,701 | INFO     | sum of square deviations: 571387990132.4452
[2025-11-26 21:36:16] 2025-11-27 02:35:42,787 | INFO     | sum of deviations: 4612537678354.396
[2025-11-26 21:36:16] 2025-11-27 02:35:42,787 | INFO     | mean x: 1764172851.3238173
[2025-11-26 21:36:16] 2025-11-27 02:35:42,787 | INFO     | mean y: 3114160.2055464927
[2025-11-26 21:36:16] 2025-11-27 02:35:42,787 | INFO     | intersect: -14238196277.514402
[2025-11-26 21:36:16] 2025-11-27 02:35:42,789 | INFO     | chi2: 0.18799545360129952
[2025-11-26 21:36:16] 2025-11-27 02:35:42,789 | INFO     | current memory leak: 8.07 B/s (using 1226 data points, chi2=0.19)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,794 | INFO     | could have reported an average CPU frequency of 2802 MHz (46 samples)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,795 | INFO     | ..............................
[2025-11-26 21:36:16] 2025-11-27 02:35:42,795 | INFO     | . Timing measurements:
[2025-11-26 21:36:16] 2025-11-27 02:35:42,795 | INFO     | . get job = 0 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,795 | INFO     | . initial setup = 4 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,795 | INFO     | . payload setup = 38 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,795 | INFO     | . stage-in = 0 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,796 | INFO     | . payload execution = 77295 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,796 | INFO     | . stage-out = 5 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,796 | INFO     | . log creation = 1 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,796 | INFO     | ..............................
[2025-11-26 21:36:16] 2025-11-27 02:35:42,958 | INFO     | 
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | job summary report
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | --------------------------------------------------
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | PanDA job id: 6891106037
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | task id: 47483661
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | errors: (none)
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | pilot state: finished 
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | transexitcode: 0
[2025-11-26 21:36:16] 2025-11-27 02:35:42,959 | INFO     | exeerrorcode: 0
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | exeerrordiag: 
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | exitcode: 0
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | exitmsg: OK
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | cpuconsumptiontime: 328390 s
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | nevents: 1000
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | neventsw: 0
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | pid: 1970329
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | pgrp: 1970329
[2025-11-26 21:36:16] 2025-11-27 02:35:42,960 | INFO     | corecount: 9
[2025-11-26 21:36:16] 2025-11-27 02:35:42,961 | INFO     | event service: False
[2025-11-26 21:36:16] 2025-11-27 02:35:42,961 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 23: 2284360, 29: 2284650, 34: 2284678, 77334: 2344285, 77335: 2344284, 77341: 2353390, 77353: 2353580}
[2025-11-26 21:36:16] 2025-11-27 02:35:42,961 | INFO     | --------------------------------------------------
[2025-11-26 21:36:16] 2025-11-27 02:35:42,961 | INFO     | 
[2025-11-26 21:36:16] 2025-11-27 02:35:42,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 21:36:16] 2025-11-27 02:35:43,024 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,025 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,025 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:36:16] 2025-11-27 02:35:43,028 | INFO     | job 6891106037 has completed (purged errors)
[2025-11-26 21:36:16] 2025-11-27 02:35:43,028 | INFO     | overall cleanup function is called
[2025-11-26 21:36:16] 2025-11-27 02:35:44,116 | INFO     | --- collectZombieJob: --- 10, [1970329]
[2025-11-26 21:36:16] 2025-11-27 02:35:44,117 | INFO     | zombie collector waiting for pid 1970329
[2025-11-26 21:36:16] 2025-11-27 02:35:44,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:36:16] 2025-11-27 02:35:44,117 | INFO     | collected zombie processes
[2025-11-26 21:36:16] 2025-11-27 02:35:44,117 | INFO     | will attempt to kill all subprocesses of pid=1970329
[2025-11-26 21:36:16] 2025-11-27 02:35:44,910 | INFO     | process IDs to be killed: [1970329] (in reverse order)
[2025-11-26 21:36:16] 2025-11-27 02:35:45,113 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:36:16] 2025-11-27 02:35:45,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:36:16] 2025-11-27 02:35:45,180 | INFO     | did not find any defunct processes belonging to 1970329
[2025-11-26 21:36:16] 2025-11-27 02:35:45,234 | INFO     | did not find any defunct processes belonging to 1970329
[2025-11-26 21:36:16] 2025-11-27 02:35:45,247 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:36:16] 2025-11-27 02:35:45,247 | INFO     | ready for new job
[2025-11-26 21:36:16] 2025-11-27 02:35:45,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:36:16] 2025-11-27 02:35:45,257 | INFO     | ***************************************
[2025-11-26 21:36:16] 2025-11-27 02:35:45,257 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:36:16] 2025-11-27 02:35:45,258 | INFO     | ***************************************
[2025-11-26 21:36:16] 2025-11-27 02:35:45,258 | INFO     | 
[2025-11-26 21:36:16] 2025-11-27 02:35:45,260 | INFO     | architecture information:
[2025-11-26 21:36:16] 2025-11-27 02:35:45,262 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:36:16] 2025-11-27 02:35:45,283 | INFO     | cat /etc/os-release:
[2025-11-26 21:36:16] NAME="CentOS Linux"
[2025-11-26 21:36:16] VERSION="7 (Core)"
[2025-11-26 21:36:16] ID="centos"
[2025-11-26 21:36:16] ID_LIKE="rhel fedora"
[2025-11-26 21:36:16] VERSION_ID="7"
[2025-11-26 21:36:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:36:16] ANSI_COLOR="0;31"
[2025-11-26 21:36:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:36:16] HOME_URL="https://www.centos.org/"
[2025-11-26 21:36:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:36:16] 
[2025-11-26 21:36:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:36:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:36:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:36:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:36:16] 
[2025-11-26 21:36:16] 2025-11-27 02:35:45,283 | INFO     | ***************************************
[2025-11-26 21:36:16] 2025-11-27 02:35:45,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 21:36:16] 2025-11-27 02:35:45,819 | INFO     | sufficient remaining disk space (59063140352 B)
[2025-11-26 21:36:16] 2025-11-27 02:35:45,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:36:16] 2025-11-27 02:35:45,820 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:36:16] 2025-11-27 02:35:45,820 | INFO     | update_server=False
[2025-11-26 21:36:16] 2025-11-27 02:35:45,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:36:16] 2025-11-27 02:35:45,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:36:16] 2025-11-27 02:35:45,821 | INFO     | aborting loop
[2025-11-26 21:36:16] 2025-11-27 02:35:45,852 | INFO     | all job control threads have been joined
[2025-11-26 21:36:16] 2025-11-27 02:35:46,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:36:16] 2025-11-27 02:35:46,443 | INFO     | all data control threads have been joined
[2025-11-26 21:36:16] 2025-11-27 02:35:46,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:36:16] 2025-11-27 02:35:46,826 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:46,829 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:46,839 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:46,873 | INFO     | all payload control threads have been joined
[2025-11-26 21:36:16] 2025-11-27 02:35:46,902 | INFO     | [job] control thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:46,965 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,384 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,449 | INFO     | [data] control thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,477 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,879 | INFO     | [payload] control thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,880 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,895 | INFO     | [job] validate thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,950 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:47,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:36:16] 2025-11-27 02:35:48,802 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:48,980 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:50,504 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:36:16] 2025-11-27 02:35:52,098 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:36:16] 2025-11-27 02:35:53,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893484214080)>', '<ExcThread(monitor, started 139892671616768)>']
[2025-11-26 21:36:16] 2025-11-27 02:35:58,399 | INFO     | all workflow threads have been joined
[2025-11-26 21:36:16] 2025-11-27 02:35:58,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:36:16] 2025-11-27 02:35:58,400 | INFO     | traces error code: 0
[2025-11-26 21:36:16] 2025-11-27 02:35:58,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:36:16] 2025-11-27 02:36:16,000 | INFO     | PID=1945982 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 21:36:16] 2025-11-27 02:36:16,000 | INFO     | .. there are 50 such processes running
[2025-11-26 21:36:16] 2025-11-27 02:36:16,001 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:36:16] 2025-11-27 02:36:16,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:36:16] 2025-11-27 02:36:16,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:36:16] 2025-11-27 02:36:16,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:36:16] 2025-11-27 02:36:16,002 | INFO     | [monitor] control thread has ended
[2025-11-26 21:36:16] 2025-11-27 02:36:16,442 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:36:16] 2025-11-27 02:36:16,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:36:16] 2025-11-27 02:36:16,459 [wrapper] pilotpid: 1945982
[2025-11-26 21:36:16] 2025-11-27 02:36:16,462 [wrapper] Pilot exit status: 0
[2025-11-26 21:36:16] 2025-11-27 02:36:16,479 [wrapper] pandaids: 6891106037
[2025-11-26 21:36:16] 2025-11-27 02:36:16,571 [wrapper] cleanup supervisor_pilot 3419403 1945983
[2025-11-26 21:36:16] 2025-11-27 02:36:16,573 [wrapper] Test setup, not cleaning
[2025-11-26 21:36:16] 2025-11-27 02:36:16,576 [wrapper] apfmon messages muted
[2025-11-26 21:36:16] 2025-11-27 02:36:16,578 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:36:16] 2025-11-27 02:36:16,580 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:36:16]  *** Error codes and diagnostics ***
[2025-11-26 21:36:16]     "exeErrorCode": 0,
[2025-11-26 21:36:16]     "exeErrorDiag": "",
[2025-11-26 21:36:16]     "pilotErrorCode": 0,
[2025-11-26 21:36:16]     "pilotErrorDiag": "",
[2025-11-26 21:36:16]  *** Listing of results directory ***
[2025-11-26 21:36:16] total 1327724
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-26 21:36:16] -rwx------. 1 boincer umatlas     36292 Nov 18 01:59 runpilot2-wrapper.sh
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:36:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 21:36:16] -rw-r--r--. 2 boincer umatlas 410083557 Nov 26 00:04 EVNT.47483658._000249.pool.root.1
[2025-11-26 21:36:16] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-26 21:36:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 21:36:16] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:04 input.tar.gz
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 21:36:16] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas       533 Nov 26 21:22 boinc_task_state.xml
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas      6614 Nov 26 21:29 init_data.xml
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas 921836846 Nov 26 21:34 HITS.47483661._002188.pool.root.1
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas      1059 Nov 26 21:35 memory_monitor_summary.json
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas        95 Nov 26 21:35 pilot_heartbeat.json
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:35 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas   2446598 Nov 26 21:35 log.47483661._002188.job.log.tgz.1
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas      8616 Nov 26 21:35 heartbeat.json
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:36 wrapper_checkpoint.txt
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:36 boinc_mmap_file
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas       824 Nov 26 21:36 pilotlog.txt
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas   9428602 Nov 26 21:36 log.47483661._002188.job.log.1
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas       353 Nov 26 21:36 output.list
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:36 runtime_log
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas  11898880 Nov 26 21:36 result.tar.gz
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas      8699 Nov 26 21:36 runtime_log.err
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas       659 Nov 26 21:36 DfSKDmfrUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDml8qMDmsSc84m.diag
[2025-11-26 21:36:16] -rw-r--r--. 1 boincer umatlas     21164 Nov 26 21:36 stderr.txt
[2025-11-26 21:36:16] HITS file was successfully produced:
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas 921836846 Nov 26 21:34 shared/HITS.pool.root.1
[2025-11-26 21:36:16]  *** Contents of shared directory: ***
[2025-11-26 21:36:16] total 1312932
[2025-11-26 21:36:16] -rw-r--r--. 2 boincer umatlas 410083557 Nov 26 00:04 ATLAS.root_0
[2025-11-26 21:36:16] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-26 21:36:16] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:04 input.tar.gz
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas 921836846 Nov 26 21:34 HITS.pool.root.1
[2025-11-26 21:36:16] -rw-------. 1 boincer umatlas  11898880 Nov 26 21:36 result.tar.gz
21:36:18 (1934139): run_atlas exited; CPU time 332102.458905
21:36:18 (1934139): called boinc_finish(0)

</stderr_txt>
]]>

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