Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:15 (3233147): wrapper (7.7.26015): starting
00:05:15 (3233147): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:05:15] Arguments: --nthreads 9
[2025-11-26 00:05:15] Threads: 9
[2025-11-26 00:05:15] Checking for CVMFS
[2025-11-26 00:05:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:05:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:05:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:05:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:05:17] 2.13.2.0 6869 36183 165152 153309 2 280 35976632 40960000 17733 16776704 0 69924017 99.777 36207824 41072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:05:17] CVMFS is ok
[2025-11-26 00:05:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:05:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:05:17] Further information can be found at the LHC@home message board.
[2025-11-26 00:05:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:05:17] Checking for apptainer binary...
[2025-11-26 00:05:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:05:17] Running /usr/bin/apptainer --version
[2025-11-26 00:05:17] apptainer version 1.4.4-1.el9
[2025-11-26 00:05:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:05:18] c-212-13.aglt2.org
[2025-11-26 00:05:18] apptainer works
[2025-11-26 00:05:18] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:05:18] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:05:18] Starting ATLAS job with PandaID=6891104840
[2025-11-26 00:05:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:30:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:30:33] 2025-11-27 22:29:45,541 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 17:30:33] 2025-11-27 22:29:45,541 | INFO     | executing command: lscpu
[2025-11-27 17:30:33] 2025-11-27 22:29:45,617 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 17:30:33] 2025-11-27 22:29:47,331 | INFO     | time since job start (148977s) is within the limit (172800.0s)
[2025-11-27 17:30:33] 2025-11-27 22:29:48,008 | INFO     | monitor loop #9071: job 0:6891104840 is in state 'finished'
[2025-11-27 17:30:33] 2025-11-27 22:29:48,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:30:33] 2025-11-27 22:29:49,344 | INFO     | time since job start (148979s) is within the limit (172800.0s)
[2025-11-27 17:30:33] 2025-11-27 22:29:50,513 | INFO     | monitor loop #9072: job 0:6891104840 is in state 'finished'
[2025-11-27 17:30:33] 2025-11-27 22:29:50,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:30:33] 2025-11-27 22:29:51,350 | INFO     | time since job start (148981s) is within the limit (172800.0s)
[2025-11-27 17:30:33] 2025-11-27 22:29:53,032 | INFO     | monitor loop #9073: job 0:6891104840 is in state 'finished'
[2025-11-27 17:30:33] 2025-11-27 22:29:53,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:30:33] 2025-11-27 22:29:53,357 | INFO     | time since job start (148983s) is within the limit (172800.0s)
[2025-11-27 17:30:33] 2025-11-27 22:29:55,368 | INFO     | time since job start (148985s) is within the limit (172800.0s)
[2025-11-27 17:30:33] 2025-11-27 22:29:55,536 | INFO     | monitor loop #9074: job 0:6891104840 is in state 'finished'
[2025-11-27 17:30:33] 2025-11-27 22:29:55,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:30:33] 2025-11-27 22:29:57,360 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 17:30:33] 2025-11-27 22:29:57,366 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2987.2074270833327
[2025-11-27 17:30:33] 2025-11-27 22:29:57,379 | INFO     | time since job start (148987s) is within the limit (172800.0s)
[2025-11-27 17:30:33] 2025-11-27 22:29:57,381 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891104840/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:30:33] 2025-11-27 22:29:57,382 | INFO     | extracted standard info from prmon json
[2025-11-27 17:30:33] 2025-11-27 22:29:57,382 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:30:33] 2025-11-27 22:29:57,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:30:33] 2025-11-27 22:29:57,414 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:30:33] 2025-11-27 22:29:57,417 | INFO     | sum of square deviations: 4498834828118.225
[2025-11-27 17:30:33] 2025-11-27 22:29:57,653 | INFO     | sum of deviations: 22959558051933.83
[2025-11-27 17:30:33] 2025-11-27 22:29:57,653 | INFO     | mean x: 1764208156.293973
[2025-11-27 17:30:33] 2025-11-27 22:29:57,654 | INFO     | mean y: 3013032.3517835177
[2025-11-27 17:30:33] 2025-11-27 22:29:57,654 | INFO     | intersect: -9000527023.611832
[2025-11-27 17:30:33] 2025-11-27 22:29:57,663 | INFO     | chi2: 23.382197769309762
[2025-11-27 17:30:33] 2025-11-27 22:29:57,665 | INFO     | sum of square deviations: 4471224230799.355
[2025-11-27 17:30:33] 2025-11-27 22:29:57,783 | INFO     | sum of deviations: 23858990323043.58
[2025-11-27 17:30:33] 2025-11-27 22:29:57,783 | INFO     | mean x: 1764208003.7986853
[2025-11-27 17:30:33] 2025-11-27 22:29:57,784 | INFO     | mean y: 3017999.854149548
[2025-11-27 17:30:33] 2025-11-27 22:29:57,784 | INFO     | intersect: -9411008118.65785
[2025-11-27 17:30:33] 2025-11-27 22:29:57,786 | INFO     | chi2: 19.919209761510523
[2025-11-27 17:30:33] 2025-11-27 22:29:57,786 | INFO     | current chi2=19.919209761510523 (change=14.810361463731073 %)
[2025-11-27 17:30:33] 2025-11-27 22:29:57,786 | INFO     | right removable region: 2433
[2025-11-27 17:30:33] 2025-11-27 22:29:57,788 | INFO     | sum of square deviations: 4471220817849.355
[2025-11-27 17:30:33] 2025-11-27 22:29:57,904 | INFO     | sum of deviations: 21933109924439.105
[2025-11-27 17:30:33] 2025-11-27 22:29:57,904 | INFO     | mean x: 1764208308.7986853
[2025-11-27 17:30:33] 2025-11-27 22:29:57,904 | INFO     | mean y: 3018700.849219392
[2025-11-27 17:30:33] 2025-11-27 22:29:57,904 | INFO     | intersect: -8651122157.508644
[2025-11-27 17:30:33] 2025-11-27 22:29:57,906 | INFO     | chi2: 19.17154049292426
[2025-11-27 17:30:33] 2025-11-27 22:29:57,907 | INFO     | current chi2=19.17154049292426 (change=18.007961945785038 %)
[2025-11-27 17:30:33] 2025-11-27 22:29:57,907 | INFO     | left removable region: 10
[2025-11-27 17:30:33] 2025-11-27 22:29:57,909 | INFO     | sum of square deviations: 4410872267565.476
[2025-11-27 17:30:33] 2025-11-27 22:29:58,021 | INFO     | sum of deviations: 22096990512167.848
[2025-11-27 17:30:33] 2025-11-27 22:29:58,022 | INFO     | mean x: 1764208278.309121
[2025-11-27 17:30:33] 2025-11-27 22:29:58,022 | INFO     | mean y: 3030151.0949236485
[2025-11-27 17:30:33] 2025-11-27 22:29:58,022 | INFO     | intersect: -8835061551.07109
[2025-11-27 17:30:33] 2025-11-27 22:29:58,024 | INFO     | chi2: 11.295454896869927
[2025-11-27 17:30:33] 2025-11-27 22:29:58,024 | INFO     | current memory leak: 5.01 B/s (using 2423 data points, chi2=11.30)
[2025-11-27 17:30:33] 2025-11-27 22:29:58,026 | INFO     | could have reported an average CPU frequency of 3050 MHz (85 samples)
[2025-11-27 17:30:33] 2025-11-27 22:29:58,026 | INFO     | ..............................
[2025-11-27 17:30:33] 2025-11-27 22:29:58,026 | INFO     | . Timing measurements:
[2025-11-27 17:30:33] 2025-11-27 22:29:58,026 | INFO     | . get job = 0 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,026 | INFO     | . initial setup = 6 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,026 | INFO     | . payload setup = 61 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,027 | INFO     | . stage-in = 0 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,027 | INFO     | . payload execution = 148812 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,027 | INFO     | . stage-out = 7 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,027 | INFO     | . log creation = 2 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,027 | INFO     | ..............................
[2025-11-27 17:30:33] 2025-11-27 22:29:58,587 | INFO     | 
[2025-11-27 17:30:33] 2025-11-27 22:29:58,587 | INFO     | job summary report
[2025-11-27 17:30:33] 2025-11-27 22:29:58,587 | INFO     | --------------------------------------------------
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | PanDA job id: 6891104840
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | task id: 47483661
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | errors: (none)
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | pilot state: finished 
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | transexitcode: 0
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | exeerrorcode: 0
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | exeerrordiag: 
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | exitcode: 0
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | exitmsg: OK
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | cpuconsumptiontime: 213104 s
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | nevents: 1000
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | neventsw: 0
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | pid: 3298082
[2025-11-27 17:30:33] 2025-11-27 22:29:58,588 | INFO     | pgrp: 3298082
[2025-11-27 17:30:33] 2025-11-27 22:29:58,589 | INFO     | corecount: 9
[2025-11-27 17:30:33] 2025-11-27 22:29:58,589 | INFO     | event service: False
[2025-11-27 17:30:33] 2025-11-27 22:29:58,589 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 24: 2284360, 35: 2284388, 45: 2284834, 148875: 2379876, 148876: 2379875, 148884: 2388925, 148888: 2388981, 148902: 238
[2025-11-27 17:30:33] 2025-11-27 22:29:58,589 | INFO     | --------------------------------------------------
[2025-11-27 17:30:33] 2025-11-27 22:29:58,589 | INFO     | 
[2025-11-27 17:30:33] 2025-11-27 22:29:58,589 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 17:30:33] 2025-11-27 22:29:59,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,009 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:30:33] 2025-11-27 22:29:59,037 | INFO     | job 6891104840 has completed (purged errors)
[2025-11-27 17:30:33] 2025-11-27 22:29:59,037 | INFO     | overall cleanup function is called
[2025-11-27 17:30:33] 2025-11-27 22:30:00,356 | INFO     | --- collectZombieJob: --- 10, [3298082]
[2025-11-27 17:30:33] 2025-11-27 22:30:00,358 | INFO     | zombie collector waiting for pid 3298082
[2025-11-27 17:30:33] 2025-11-27 22:30:00,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:30:33] 2025-11-27 22:30:00,358 | INFO     | collected zombie processes
[2025-11-27 17:30:33] 2025-11-27 22:30:00,358 | INFO     | will attempt to kill all subprocesses of pid=3298082
[2025-11-27 17:30:33] 2025-11-27 22:30:01,507 | INFO     | process IDs to be killed: [3298082] (in reverse order)
[2025-11-27 17:30:33] 2025-11-27 22:30:01,841 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:30:33] 2025-11-27 22:30:01,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:30:33] 2025-11-27 22:30:01,866 | INFO     | did not find any defunct processes belonging to 3298082
[2025-11-27 17:30:33] 2025-11-27 22:30:01,896 | INFO     | did not find any defunct processes belonging to 3298082
[2025-11-27 17:30:33] 2025-11-27 22:30:01,898 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:30:33] 2025-11-27 22:30:01,899 | INFO     | ready for new job
[2025-11-27 17:30:33] 2025-11-27 22:30:01,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:30:33] 2025-11-27 22:30:01,915 | INFO     | ***************************************
[2025-11-27 17:30:33] 2025-11-27 22:30:01,921 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:30:33] 2025-11-27 22:30:01,921 | INFO     | ***************************************
[2025-11-27 17:30:33] 2025-11-27 22:30:01,921 | INFO     | 
[2025-11-27 17:30:33] 2025-11-27 22:30:01,930 | INFO     | architecture information:
[2025-11-27 17:30:33] 2025-11-27 22:30:01,934 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:30:33] 2025-11-27 22:30:02,007 | INFO     | cat /etc/os-release:
[2025-11-27 17:30:33] NAME="CentOS Linux"
[2025-11-27 17:30:33] VERSION="7 (Core)"
[2025-11-27 17:30:33] ID="centos"
[2025-11-27 17:30:33] ID_LIKE="rhel fedora"
[2025-11-27 17:30:33] VERSION_ID="7"
[2025-11-27 17:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:30:33] ANSI_COLOR="0;31"
[2025-11-27 17:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:30:33] HOME_URL="https://www.centos.org/"
[2025-11-27 17:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:30:33] 
[2025-11-27 17:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:30:33] 
[2025-11-27 17:30:33] 2025-11-27 22:30:02,007 | INFO     | ***************************************
[2025-11-27 17:30:33] 2025-11-27 22:30:02,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 17:30:33] 2025-11-27 22:30:02,552 | INFO     | sufficient remaining disk space (122793492480 B)
[2025-11-27 17:30:33] 2025-11-27 22:30:02,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:30:33] 2025-11-27 22:30:02,553 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:30:33] 2025-11-27 22:30:02,553 | INFO     | update_server=False
[2025-11-27 17:30:33] 2025-11-27 22:30:02,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:30:33] 2025-11-27 22:30:02,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:30:33] 2025-11-27 22:30:02,554 | INFO     | aborting loop
[2025-11-27 17:30:33] 2025-11-27 22:30:02,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:30:33] 2025-11-27 22:30:03,032 | INFO     | all data control threads have been joined
[2025-11-27 17:30:33] 2025-11-27 22:30:03,212 | INFO     | all job control threads have been joined
[2025-11-27 17:30:33] 2025-11-27 22:30:03,225 | INFO     | all payload control threads have been joined
[2025-11-27 17:30:33] 2025-11-27 22:30:03,560 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:03,561 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:03,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:30:33] 2025-11-27 22:30:04,037 | INFO     | [data] control thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,041 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,219 | INFO     | [job] control thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,231 | INFO     | [payload] control thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:30:33] 2025-11-27 22:30:04,561 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,573 | INFO     | [job] validate thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,577 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,581 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,592 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,610 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,610 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,958 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:04,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:08,265 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:30:33] 2025-11-27 22:30:13,229 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:30:33] 2025-11-27 22:30:14,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229386835776)>', '<ExcThread(monitor, started 140228668946176)>']
[2025-11-27 17:30:33] 2025-11-27 22:30:19,135 | INFO     | all workflow threads have been joined
[2025-11-27 17:30:33] 2025-11-27 22:30:19,135 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:30:33] 2025-11-27 22:30:19,136 | INFO     | traces error code: 0
[2025-11-27 17:30:33] 2025-11-27 22:30:19,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:30:33] 2025-11-27 22:30:31,658 | INFO     | PID=3250896 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:30:33] 2025-11-27 22:30:31,658 | INFO     | .. there are 18 such processes running
[2025-11-27 17:30:33] 2025-11-27 22:30:31,658 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:30:33] 2025-11-27 22:30:31,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:30:33] 2025-11-27 22:30:31,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:30:33] 2025-11-27 22:30:31,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:30:33] 2025-11-27 22:30:31,659 | INFO     | [monitor] control thread has ended
[2025-11-27 17:30:33] 2025-11-27 22:30:31,838 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:30:33] 2025-11-27 22:30:31,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:30:33] 2025-11-27 22:30:31,870 [wrapper] pilotpid: 3250896
[2025-11-27 17:30:33] 2025-11-27 22:30:31,888 [wrapper] Pilot exit status: 0
[2025-11-27 17:30:33] 2025-11-27 22:30:32,039 [wrapper] pandaids: 6891104840
[2025-11-27 17:30:33] 2025-11-27 22:30:32,544 [wrapper] cleanup supervisor_pilot  736315 3250897
[2025-11-27 17:30:33] 2025-11-27 22:30:32,574 [wrapper] Test setup, not cleaning
[2025-11-27 17:30:33] 2025-11-27 22:30:32,590 [wrapper] apfmon messages muted
[2025-11-27 17:30:33] 2025-11-27 22:30:32,611 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:30:33] 2025-11-27 22:30:32,629 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:30:33]  *** Error codes and diagnostics ***
[2025-11-27 17:30:33]     "exeErrorCode": 0,
[2025-11-27 17:30:33]     "exeErrorDiag": "",
[2025-11-27 17:30:33]     "pilotErrorCode": 0,
[2025-11-27 17:30:33]     "pilotErrorDiag": "",
[2025-11-27 17:30:33]  *** Listing of results directory ***
[2025-11-27 17:30:33] total 1340524
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-27 17:30:33] -rwx------. 1 boincer umatlas     36292 Nov 18 01:59 runpilot2-wrapper.sh
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:30:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:05 run_atlas
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:05 job.xml
[2025-11-27 17:30:33] -rw-r--r--. 2 boincer umatlas 409785293 Nov 26 00:05 EVNT.47483658._000232.pool.root.1
[2025-11-27 17:30:33] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-27 17:30:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:05 shared
[2025-11-27 17:30:33] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:05 input.tar.gz
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:05 boinc_lockfile
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:05 pandaJob.out
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas    991877 Nov 26 00:06 agis_schedconf.cvmfs.json
[2025-11-27 17:30:33] drwx------. 5 boincer umatlas      4096 Nov 26 00:06 pilot3
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:13 boinc_task_state.xml
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas 914588554 Nov 27 17:28 HITS.47483661._002017.pool.root.1
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 17:28 init_data.xml
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas      1068 Nov 27 17:29 memory_monitor_summary.json
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas   3295131 Nov 27 17:29 log.47483661._002017.job.log.tgz.1
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas        95 Nov 27 17:29 pilot_heartbeat.json
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas      8606 Nov 27 17:29 heartbeat.json
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas       823 Nov 27 17:30 pilotlog.txt
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:30 boinc_mmap_file
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:30 wrapper_checkpoint.txt
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas  18909433 Nov 27 17:30 log.47483661._002017.job.log.1
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas       353 Nov 27 17:30 output.list
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:30 runtime_log
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas  22220800 Nov 27 17:30 result.tar.gz
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas       669 Nov 27 17:30 xpVKDmJrUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1NKODmfvQe2m.diag
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas      8705 Nov 27 17:30 runtime_log.err
[2025-11-27 17:30:33] -rw-r--r--. 1 boincer umatlas     21854 Nov 27 17:30 stderr.txt
[2025-11-27 17:30:33] HITS file was successfully produced:
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas 914588554 Nov 27 17:28 shared/HITS.pool.root.1
[2025-11-27 17:30:33]  *** Contents of shared directory: ***
[2025-11-27 17:30:33] total 1315644
[2025-11-27 17:30:33] -rw-r--r--. 2 boincer umatlas 409785293 Nov 26 00:05 ATLAS.root_0
[2025-11-27 17:30:33] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:05 start_atlas.sh
[2025-11-27 17:30:33] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:05 input.tar.gz
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas 914588554 Nov 27 17:28 HITS.pool.root.1
[2025-11-27 17:30:33] -rw-------. 1 boincer umatlas  22220800 Nov 27 17:30 result.tar.gz
17:30:35 (3233147): run_atlas exited; CPU time 215908.225193
17:30:35 (3233147): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN