Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:57 (1918818): wrapper (7.7.26015): starting
00:04:57 (1918818): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:57] Arguments: --nthreads 9
[2025-11-26 00:04:57] Threads: 9
[2025-11-26 00:04:57] Checking for CVMFS
[2025-11-26 00:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:58] 2.13.2.0 6751 33902 258036 153309 1 582 33837283 40960001 23498 16776704 0 101046370 99.582 104744090 36684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:58] CVMFS is ok
[2025-11-26 00:04:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:58] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:58] Checking for apptainer binary...
[2025-11-26 00:04:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:58] Running /usr/bin/apptainer --version
[2025-11-26 00:04:58] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:59] c-212-7.aglt2.org
[2025-11-26 00:04:59] apptainer works
[2025-11-26 00:04:59] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:59] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:59] Starting ATLAS job with PandaID=6891071863
[2025-11-26 00:04:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:07:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:07:49] 2025-11-27 15:07:06,958 | INFO     | monitor loop #7257: job 0:6891071863 is in state 'finished'
[2025-11-27 10:07:49] 2025-11-27 15:07:06,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:07:49] 2025-11-27 15:07:08,487 | INFO     | time since job start (122466s) is within the limit (172800.0s)
[2025-11-27 10:07:49] 2025-11-27 15:07:08,588 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 10:07:49] 2025-11-27 15:07:08,617 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2919.0171874999983
[2025-11-27 10:07:49] 2025-11-27 15:07:08,667 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891071863/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:07:49] 2025-11-27 15:07:08,668 | INFO     | extracted standard info from prmon json
[2025-11-27 10:07:49] 2025-11-27 15:07:08,668 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:07:49] 2025-11-27 15:07:08,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:07:49] 2025-11-27 15:07:08,701 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:07:49] 2025-11-27 15:07:08,703 | INFO     | sum of square deviations: 2502863027376.653
[2025-11-27 10:07:49] 2025-11-27 15:07:08,788 | INFO     | sum of deviations: 14234674967702.037
[2025-11-27 10:07:49] 2025-11-27 15:07:08,788 | INFO     | mean x: 1764194839.9740777
[2025-11-27 10:07:49] 2025-11-27 15:07:08,788 | INFO     | mean y: 2962507.0004985044
[2025-11-27 10:07:49] 2025-11-27 15:07:08,788 | INFO     | intersect: -10030642948.848093
[2025-11-27 10:07:49] 2025-11-27 15:07:08,790 | INFO     | chi2: 9.49582724304365
[2025-11-27 10:07:49] 2025-11-27 15:07:08,792 | INFO     | sum of square deviations: 2484194358443.4683
[2025-11-27 10:07:49] 2025-11-27 15:07:08,903 | INFO     | sum of deviations: 14938645088908.314
[2025-11-27 10:07:49] 2025-11-27 15:07:08,903 | INFO     | mean x: 1764194687.48026
[2025-11-27 10:07:49] 2025-11-27 15:07:08,903 | INFO     | mean y: 2968256.9570214893
[2025-11-27 10:07:49] 2025-11-27 15:07:08,904 | INFO     | intersect: -10605975529.759521
[2025-11-27 10:07:49] 2025-11-27 15:07:08,905 | INFO     | chi2: 6.219568498701916
[2025-11-27 10:07:49] 2025-11-27 15:07:08,905 | INFO     | current chi2=6.219568498701916 (change=34.50208876474474 %)
[2025-11-27 10:07:49] 2025-11-27 15:07:08,907 | INFO     | sum of square deviations: 2465618639209.609
[2025-11-27 10:07:49] 2025-11-27 15:07:09,019 | INFO     | sum of deviations: 15276988854650.766
[2025-11-27 10:07:49] 2025-11-27 15:07:09,020 | INFO     | mean x: 1764194534.985972
[2025-11-27 10:07:49] 2025-11-27 15:07:09,020 | INFO     | mean y: 2971031.670841683
[2025-11-27 10:07:49] 2025-11-27 15:07:09,020 | INFO     | intersect: -10927989588.036438
[2025-11-27 10:07:49] 2025-11-27 15:07:09,022 | INFO     | chi2: 4.866901481509182
[2025-11-27 10:07:49] 2025-11-27 15:07:09,022 | INFO     | current chi2=4.866901481509182 (change=21.748566921886116 %)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,022 | INFO     | right removable region: 1995
[2025-11-27 10:07:49] 2025-11-27 15:07:09,024 | INFO     | sum of square deviations: 2484191331013.467
[2025-11-27 10:07:49] 2025-11-27 15:07:09,183 | INFO     | sum of deviations: 13441679661794.184
[2025-11-27 10:07:49] 2025-11-27 15:07:09,183 | INFO     | mean x: 1764194992.48026
[2025-11-27 10:07:49] 2025-11-27 15:07:09,184 | INFO     | mean y: 2968983.093453273
[2025-11-27 10:07:49] 2025-11-27 15:07:09,184 | INFO     | intersect: -9542891536.509377
[2025-11-27 10:07:49] 2025-11-27 15:07:09,187 | INFO     | chi2: 5.748422849698466
[2025-11-27 10:07:49] 2025-11-27 15:07:09,187 | INFO     | current chi2=5.748422849698466 (change=39.46369597330677 %)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,189 | INFO     | sum of square deviations: 2465613071991.547
[2025-11-27 10:07:49] 2025-11-27 15:07:09,367 | INFO     | sum of deviations: 13125606194232.932
[2025-11-27 10:07:49] 2025-11-27 15:07:09,367 | INFO     | mean x: 1764195144.9849699
[2025-11-27 10:07:49] 2025-11-27 15:07:09,367 | INFO     | mean y: 2971576.0656312625
[2025-11-27 10:07:49] 2025-11-27 15:07:09,367 | INFO     | intersect: -9388660462.99819
[2025-11-27 10:07:49] 2025-11-27 15:07:09,369 | INFO     | chi2: 5.221023232791831
[2025-11-27 10:07:49] 2025-11-27 15:07:09,369 | INFO     | current chi2=5.221023232791831 (change=9.174683747113347 %)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,369 | INFO     | left removable region: 20
[2025-11-27 10:07:49] 2025-11-27 15:07:09,371 | INFO     | sum of square deviations: 2388601691927.705
[2025-11-27 10:07:49] 2025-11-27 15:07:09,458 | INFO     | sum of deviations: 13819666319418.043
[2025-11-27 10:07:49] 2025-11-27 15:07:09,459 | INFO     | mean x: 1764195114.50481
[2025-11-27 10:07:49] 2025-11-27 15:07:09,459 | INFO     | mean y: 2983365.0470886077
[2025-11-27 10:07:49] 2025-11-27 15:07:09,459 | INFO     | intersect: -10204071200.474796
[2025-11-27 10:07:49] 2025-11-27 15:07:09,461 | INFO     | chi2: 0.43609169607191056
[2025-11-27 10:07:49] 2025-11-27 15:07:09,461 | INFO     | current memory leak: 5.79 B/s (using 1975 data points, chi2=0.44)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | could have reported an average CPU frequency of 2993 MHz (71 samples)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | ..............................
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . Timing measurements:
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . get job = 0 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . initial setup = 3 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . payload setup = 38 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . stage-in = 0 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . payload execution = 122340 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,463 | INFO     | . stage-out = 5 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,464 | INFO     | . log creation = 1 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,464 | INFO     | ..............................
[2025-11-27 10:07:49] 2025-11-27 15:07:09,617 | INFO     | 
[2025-11-27 10:07:49] 2025-11-27 15:07:09,617 | INFO     | job summary report
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | --------------------------------------------------
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | PanDA job id: 6891071863
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | task id: 47483661
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | errors: (none)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | pilot state: finished 
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | transexitcode: 0
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | exeerrorcode: 0
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | exeerrordiag: 
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | exitcode: 0
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | exitmsg: OK
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | cpuconsumptiontime: 216120 s
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | nevents: 1000
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | neventsw: 0
[2025-11-27 10:07:49] 2025-11-27 15:07:09,618 | INFO     | pid: 1977571
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | pgrp: 1977571
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | corecount: 9
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | event service: False
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 23: 2284650, 33: 2284650, 122379: 2366566, 122385: 2375560, 122388: 2375616, 122407: 2375862}
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | --------------------------------------------------
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | 
[2025-11-27 10:07:49] 2025-11-27 15:07:09,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 10:07:49] 2025-11-27 15:07:09,783 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,783 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,783 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,783 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,784 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:07:49] 2025-11-27 15:07:09,785 | INFO     | job 6891071863 has completed (purged errors)
[2025-11-27 10:07:49] 2025-11-27 15:07:09,785 | INFO     | overall cleanup function is called
[2025-11-27 10:07:49] 2025-11-27 15:07:10,829 | INFO     | --- collectZombieJob: --- 10, [1977571]
[2025-11-27 10:07:49] 2025-11-27 15:07:10,829 | INFO     | zombie collector waiting for pid 1977571
[2025-11-27 10:07:49] 2025-11-27 15:07:10,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:07:49] 2025-11-27 15:07:10,829 | INFO     | collected zombie processes
[2025-11-27 10:07:49] 2025-11-27 15:07:10,829 | INFO     | will attempt to kill all subprocesses of pid=1977571
[2025-11-27 10:07:49] 2025-11-27 15:07:11,547 | INFO     | process IDs to be killed: [1977571] (in reverse order)
[2025-11-27 10:07:49] 2025-11-27 15:07:12,112 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:07:49] 2025-11-27 15:07:12,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:07:49] 2025-11-27 15:07:12,130 | INFO     | did not find any defunct processes belonging to 1977571
[2025-11-27 10:07:49] 2025-11-27 15:07:12,147 | INFO     | did not find any defunct processes belonging to 1977571
[2025-11-27 10:07:49] 2025-11-27 15:07:12,149 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:07:49] 2025-11-27 15:07:12,149 | INFO     | ready for new job
[2025-11-27 10:07:49] 2025-11-27 15:07:12,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:07:49] 2025-11-27 15:07:12,157 | INFO     | ***************************************
[2025-11-27 10:07:49] 2025-11-27 15:07:12,157 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:07:49] 2025-11-27 15:07:12,157 | INFO     | ***************************************
[2025-11-27 10:07:49] 2025-11-27 15:07:12,157 | INFO     | 
[2025-11-27 10:07:49] 2025-11-27 15:07:12,163 | INFO     | architecture information:
[2025-11-27 10:07:49] 2025-11-27 15:07:12,164 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:07:49] 2025-11-27 15:07:12,214 | INFO     | cat /etc/os-release:
[2025-11-27 10:07:49] NAME="CentOS Linux"
[2025-11-27 10:07:49] VERSION="7 (Core)"
[2025-11-27 10:07:49] ID="centos"
[2025-11-27 10:07:49] ID_LIKE="rhel fedora"
[2025-11-27 10:07:49] VERSION_ID="7"
[2025-11-27 10:07:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:07:49] ANSI_COLOR="0;31"
[2025-11-27 10:07:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:07:49] HOME_URL="https://www.centos.org/"
[2025-11-27 10:07:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:07:49] 
[2025-11-27 10:07:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:07:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:07:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:07:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:07:49] 
[2025-11-27 10:07:49] 2025-11-27 15:07:12,214 | INFO     | ***************************************
[2025-11-27 10:07:49] 2025-11-27 15:07:12,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 10:07:49] 2025-11-27 15:07:12,793 | INFO     | sufficient remaining disk space (121531006976 B)
[2025-11-27 10:07:49] 2025-11-27 15:07:12,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:07:49] 2025-11-27 15:07:12,794 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:07:49] 2025-11-27 15:07:12,794 | INFO     | update_server=False
[2025-11-27 10:07:49] 2025-11-27 15:07:12,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:07:49] 2025-11-27 15:07:13,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:07:49] 2025-11-27 15:07:13,000 | INFO     | aborting loop
[2025-11-27 10:07:49] 2025-11-27 15:07:13,429 | INFO     | all payload control threads have been joined
[2025-11-27 10:07:49] 2025-11-27 15:07:13,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:07:49] 2025-11-27 15:07:13,692 | INFO     | all data control threads have been joined
[2025-11-27 10:07:49] 2025-11-27 15:07:13,801 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:13,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,005 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,215 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,234 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,257 | INFO     | all job control threads have been joined
[2025-11-27 10:07:49] 2025-11-27 15:07:14,299 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,434 | INFO     | [payload] control thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,475 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:07:49] 2025-11-27 15:07:14,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:07:49] 2025-11-27 15:07:14,697 | INFO     | [data] control thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,729 | INFO     | [job] validate thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:14,982 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:15,263 | INFO     | [job] control thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:15,298 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:15,575 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:15,640 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:18,682 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:07:49] 2025-11-27 15:07:42,143 | INFO     | PID=1933780 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:07:49] 2025-11-27 15:07:42,143 | INFO     | .. there are 25 such processes running
[2025-11-27 10:07:49] 2025-11-27 15:07:42,143 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:07:49] 2025-11-27 15:07:42,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:07:49] 2025-11-27 15:07:42,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:07:49] 2025-11-27 15:07:42,664 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:07:49] 2025-11-27 15:07:43,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797869090624)>', '<ExcThread(monitor, started 139797528033024)>']
[2025-11-27 10:07:49] 2025-11-27 15:07:43,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:07:49] 2025-11-27 15:07:43,149 | INFO     | [monitor] control thread has ended
[2025-11-27 10:07:49] 2025-11-27 15:07:48,079 | INFO     | all workflow threads have been joined
[2025-11-27 10:07:49] 2025-11-27 15:07:48,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:07:49] 2025-11-27 15:07:48,079 | INFO     | traces error code: 0
[2025-11-27 10:07:49] 2025-11-27 15:07:48,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:07:49] 2025-11-27 15:07:48,449 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:07:49] 2025-11-27 15:07:48,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:07:49] 2025-11-27 15:07:48,543 [wrapper] pilotpid: 1933780
[2025-11-27 10:07:49] 2025-11-27 15:07:48,567 [wrapper] Pilot exit status: 0
[2025-11-27 10:07:49] 2025-11-27 15:07:48,767 [wrapper] pandaids: 6891071863
[2025-11-27 10:07:49] 2025-11-27 15:07:49,117 [wrapper] cleanup supervisor_pilot  551375 1933782
[2025-11-27 10:07:49] 2025-11-27 15:07:49,120 [wrapper] Test setup, not cleaning
[2025-11-27 10:07:49] 2025-11-27 15:07:49,123 [wrapper] apfmon messages muted
[2025-11-27 10:07:49] 2025-11-27 15:07:49,125 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:07:49] 2025-11-27 15:07:49,128 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:07:49]  *** Error codes and diagnostics ***
[2025-11-27 10:07:49]     "exeErrorCode": 0,
[2025-11-27 10:07:49]     "exeErrorDiag": "",
[2025-11-27 10:07:49]     "pilotErrorCode": 0,
[2025-11-27 10:07:49]     "pilotErrorDiag": "",
[2025-11-27 10:07:49]  *** Listing of results directory ***
[2025-11-27 10:07:49] total 1319852
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 00:55 pilot3.tar.gz
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 00:59 queuedata.json
[2025-11-27 10:07:49] -rwx------. 1 boincer umatlas     36292 Nov 18 01:00 runpilot2-wrapper.sh
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:07:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 10:07:49] -rw-r--r--. 2 boincer umatlas 410324335 Nov 26 00:04 EVNT.47483658._000166.pool.root.1
[2025-11-27 10:07:49] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 10:07:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 10:07:49] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:04 input.tar.gz
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 10:07:49] drwx------. 5 boincer umatlas      4096 Nov 26 00:06 pilot3
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:53 boinc_task_state.xml
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 10:02 init_data.xml
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas 900848811 Nov 27 10:05 HITS.47483661._001660.pool.root.1
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas      1064 Nov 27 10:06 memory_monitor_summary.json
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas   2955520 Nov 27 10:06 log.47483661._001660.job.log.tgz.1
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas        95 Nov 27 10:07 pilot_heartbeat.json
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas      8606 Nov 27 10:07 heartbeat.json
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas      4825 Nov 27 10:07 pilotlog.txt
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas  15264536 Nov 27 10:07 log.47483661._001660.job.log.1
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas       353 Nov 27 10:07 output.list
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:07 runtime_log
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas  18237440 Nov 27 10:07 result.tar.gz
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas      8700 Nov 27 10:07 runtime_log.err
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas       667 Nov 27 10:07 kYUKDmswTf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7JKODmTtbLGo.diag
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:07 boinc_mmap_file
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:07 wrapper_checkpoint.txt
[2025-11-27 10:07:49] -rw-r--r--. 1 boincer umatlas     21358 Nov 27 10:07 stderr.txt
[2025-11-27 10:07:49] HITS file was successfully produced:
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas 900848811 Nov 27 10:05 shared/HITS.pool.root.1
[2025-11-27 10:07:49]  *** Contents of shared directory: ***
[2025-11-27 10:07:49] total 1298860
[2025-11-27 10:07:49] -rw-r--r--. 2 boincer umatlas 410324335 Nov 26 00:04 ATLAS.root_0
[2025-11-27 10:07:49] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 10:07:49] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:04 input.tar.gz
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas 900848811 Nov 27 10:05 HITS.pool.root.1
[2025-11-27 10:07:49] -rw-------. 1 boincer umatlas  18237440 Nov 27 10:07 result.tar.gz
10:07:51 (1918818): run_atlas exited; CPU time 217947.965620
10:07:51 (1918818): called boinc_finish(0)

</stderr_txt>
]]>

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