Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:21 (1555258): wrapper (7.7.26015): starting
00:04:21 (1555258): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:04:21] Arguments: --nthreads 8
[2025-11-26 00:04:21] Threads: 8
[2025-11-26 00:04:21] Checking for CVMFS
[2025-11-26 00:04:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:22] 2.13.2.0 6956 33322 432368 153309 3 101 35233886 40960001 17464 16776704 0 124774825 99.632 113851680 38705 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:22] CVMFS is ok
[2025-11-26 00:04:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:22] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:22] Checking for apptainer binary...
[2025-11-26 00:04:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:22] Running /usr/bin/apptainer --version
[2025-11-26 00:04:23] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:23] c-206-34.aglt2.org
[2025-11-26 00:04:23] apptainer works
[2025-11-26 00:04:23] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:04:23] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:04:23] Starting ATLAS job with PandaID=6896715524
[2025-11-26 00:04:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:29:29]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:29:29] 2025-11-27 03:28:28,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:29:29] 2025-11-27 03:28:28,950 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:29:29] 2025-11-27 03:28:28,960 | INFO     | sum of square deviations: 713155575988.8287
[2025-11-26 22:29:29] 2025-11-27 03:28:29,069 | INFO     | sum of deviations: 3465742487192.0864
[2025-11-26 22:29:29] 2025-11-27 03:28:29,070 | INFO     | mean x: 1764173801.2613637
[2025-11-26 22:29:29] 2025-11-27 03:28:29,070 | INFO     | mean y: 2921778.193939394
[2025-11-26 22:29:29] 2025-11-27 03:28:29,070 | INFO     | intersect: -8570483946.559802
[2025-11-26 22:29:29] 2025-11-27 03:28:29,071 | INFO     | chi2: 7.113557542593197
[2025-11-26 22:29:29] 2025-11-27 03:28:29,080 | INFO     | sum of square deviations: 705083010715.5586
[2025-11-26 22:29:29] 2025-11-27 03:28:29,106 | INFO     | time since job start (80613s) is within the limit (172800.0s)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,157 | INFO     | sum of deviations: 3920257988601.452
[2025-11-26 22:29:29] 2025-11-27 03:28:29,157 | INFO     | mean x: 1764173648.7718632
[2025-11-26 22:29:29] 2025-11-27 03:28:29,157 | INFO     | mean y: 2930364.758174905
[2025-11-26 22:29:29] 2025-11-27 03:28:29,157 | INFO     | intersect: -9805866237.586988
[2025-11-26 22:29:29] 2025-11-27 03:28:29,158 | INFO     | chi2: 3.9142472586945782
[2025-11-26 22:29:29] 2025-11-27 03:28:29,159 | INFO     | current chi2=3.9142472586945782 (change=44.97482820294068 %)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,164 | INFO     | sum of square deviations: 697071449202.6227
[2025-11-26 22:29:29] 2025-11-27 03:28:29,234 | INFO     | sum of deviations: 4089950269546.301
[2025-11-26 22:29:29] 2025-11-27 03:28:29,235 | INFO     | mean x: 1764173496.280916
[2025-11-26 22:29:29] 2025-11-27 03:28:29,235 | INFO     | mean y: 2933587.3877862594
[2025-11-26 22:29:29] 2025-11-27 03:28:29,235 | INFO     | intersect: -10348059664.3
[2025-11-26 22:29:29] 2025-11-27 03:28:29,236 | INFO     | chi2: 2.8166911309108458
[2025-11-26 22:29:29] 2025-11-27 03:28:29,236 | INFO     | current chi2=2.8166911309108458 (change=28.040030566433177 %)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,237 | INFO     | sum of square deviations: 689120178191.0621
[2025-11-26 22:29:29] 2025-11-27 03:28:29,309 | INFO     | sum of deviations: 4056603360523.785
[2025-11-26 22:29:29] 2025-11-27 03:28:29,309 | INFO     | mean x: 1764173343.7839081
[2025-11-26 22:29:29] 2025-11-27 03:28:29,309 | INFO     | mean y: 2932947.846743295
[2025-11-26 22:29:29] 2025-11-27 03:28:29,309 | INFO     | intersect: -10382122868.87046
[2025-11-26 22:29:29] 2025-11-27 03:28:29,310 | INFO     | chi2: 2.8147388799743696
[2025-11-26 22:29:29] 2025-11-27 03:28:29,310 | INFO     | current chi2=2.8147388799743696 (change=0.06931008214041952 %)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,310 | INFO     | right removable region: 1304
[2025-11-26 22:29:29] 2025-11-27 03:28:29,316 | INFO     | sum of square deviations: 705080787265.5586
[2025-11-26 22:29:29] 2025-11-27 03:28:29,387 | INFO     | sum of deviations: 3090412804443.0986
[2025-11-26 22:29:29] 2025-11-27 03:28:29,388 | INFO     | mean x: 1764173953.7718632
[2025-11-26 22:29:29] 2025-11-27 03:28:29,388 | INFO     | mean y: 2928860.4836501903
[2025-11-26 22:29:29] 2025-11-27 03:28:29,388 | INFO     | intersect: -7729554954.80452
[2025-11-26 22:29:29] 2025-11-27 03:28:29,389 | INFO     | chi2: 4.791144503480263
[2025-11-26 22:29:29] 2025-11-27 03:28:29,389 | INFO     | current chi2=4.791144503480263 (change=32.64770159244843 %)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,390 | INFO     | sum of square deviations: 697068689824.9531
[2025-11-26 22:29:29] 2025-11-27 03:28:29,464 | INFO     | sum of deviations: 2967574769681.0366
[2025-11-26 22:29:29] 2025-11-27 03:28:29,464 | INFO     | mean x: 1764174106.2679389
[2025-11-26 22:29:29] 2025-11-27 03:28:29,464 | INFO     | mean y: 2931198.6152671757
[2025-11-26 22:29:29] 2025-11-27 03:28:29,464 | INFO     | intersect: -7507546095.093065
[2025-11-26 22:29:29] 2025-11-27 03:28:29,469 | INFO     | chi2: 4.673994423088415
[2025-11-26 22:29:29] 2025-11-27 03:28:29,469 | INFO     | current chi2=4.673994423088415 (change=2.4451376974071697 %)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,469 | INFO     | left removable region: 20
[2025-11-26 22:29:29] 2025-11-27 03:28:29,471 | INFO     | sum of square deviations: 656382704703.5388
[2025-11-26 22:29:29] 2025-11-27 03:28:29,540 | INFO     | sum of deviations: 3363699506745.7617
[2025-11-26 22:29:29] 2025-11-27 03:28:29,540 | INFO     | mean x: 1764173923.2959502
[2025-11-26 22:29:29] 2025-11-27 03:28:29,540 | INFO     | mean y: 2946178.1269470407
[2025-11-26 22:29:29] 2025-11-27 03:28:29,540 | INFO     | intersect: -9037741385.821795
[2025-11-26 22:29:29] 2025-11-27 03:28:29,541 | INFO     | chi2: 0.2510232196702276
[2025-11-26 22:29:29] 2025-11-27 03:28:29,541 | INFO     | current memory leak: 5.12 B/s (using 1284 data points, chi2=0.25)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | could have reported an average CPU frequency of 3264 MHz (47 samples)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | ..............................
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . Timing measurements:
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . get job = 0 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . initial setup = 3 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . payload setup = 17 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . stage-in = 0 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . payload execution = 80530 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . stage-out = 6 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,543 | INFO     | . log creation = 1 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,547 | INFO     | ..............................
[2025-11-26 22:29:29] 2025-11-27 03:28:29,719 | INFO     | 
[2025-11-26 22:29:29] 2025-11-27 03:28:29,719 | INFO     | job summary report
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | --------------------------------------------------
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | PanDA job id: 6896715524
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | task id: 47556161
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | errors: (none)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | pilot state: finished 
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | transexitcode: 0
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | exeerrorcode: 0
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | exeerrordiag: 
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | exitcode: 0
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | exitmsg: OK
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | cpuconsumptiontime: 199296 s
[2025-11-26 22:29:29] 2025-11-27 03:28:29,720 | INFO     | nevents: 1000
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | neventsw: 0
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | pid: 1577498
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | pgrp: 1577498
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | corecount: 8
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | event service: False
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | sizes: {0: 2284263, 11: 2284263, 13: 2284553, 22: 2284609, 80552: 2347285, 80553: 2347284, 80560: 2356462, 80561: 2356518, 80577: 2356764}
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | --------------------------------------------------
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | 
[2025-11-26 22:29:29] 2025-11-27 03:28:29,721 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 22:29:29] 2025-11-27 03:28:29,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,806 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,806 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,808 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:29:29] 2025-11-27 03:28:29,808 | INFO     | job 6896715524 has completed (purged errors)
[2025-11-26 22:29:29] 2025-11-27 03:28:29,808 | INFO     | overall cleanup function is called
[2025-11-26 22:29:29] 2025-11-27 03:28:30,851 | INFO     | --- collectZombieJob: --- 10, [1577498]
[2025-11-26 22:29:29] 2025-11-27 03:28:30,852 | INFO     | zombie collector waiting for pid 1577498
[2025-11-26 22:29:29] 2025-11-27 03:28:30,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:29:29] 2025-11-27 03:28:30,852 | INFO     | collected zombie processes
[2025-11-26 22:29:29] 2025-11-27 03:28:30,852 | INFO     | will attempt to kill all subprocesses of pid=1577498
[2025-11-26 22:29:29] 2025-11-27 03:28:32,003 | INFO     | process IDs to be killed: [1577498] (in reverse order)
[2025-11-26 22:29:29] 2025-11-27 03:28:32,416 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:29:29] 2025-11-27 03:28:32,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:29:29] 2025-11-27 03:28:32,566 | INFO     | did not find any defunct processes belonging to 1577498
[2025-11-26 22:29:29] 2025-11-27 03:28:32,589 | INFO     | did not find any defunct processes belonging to 1577498
[2025-11-26 22:29:29] 2025-11-27 03:28:32,594 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:29:29] 2025-11-27 03:28:32,594 | INFO     | ready for new job
[2025-11-26 22:29:29] 2025-11-27 03:28:32,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:29:29] 2025-11-27 03:28:32,635 | INFO     | ***************************************
[2025-11-26 22:29:29] 2025-11-27 03:28:32,635 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:29:29] 2025-11-27 03:28:32,635 | INFO     | ***************************************
[2025-11-26 22:29:29] 2025-11-27 03:28:32,635 | INFO     | 
[2025-11-26 22:29:29] 2025-11-27 03:28:32,647 | INFO     | architecture information:
[2025-11-26 22:29:29] 2025-11-27 03:28:32,654 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:29:29] 2025-11-27 03:28:32,726 | INFO     | cat /etc/os-release:
[2025-11-26 22:29:29] NAME="CentOS Linux"
[2025-11-26 22:29:29] VERSION="7 (Core)"
[2025-11-26 22:29:29] ID="centos"
[2025-11-26 22:29:29] ID_LIKE="rhel fedora"
[2025-11-26 22:29:29] VERSION_ID="7"
[2025-11-26 22:29:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:29:29] ANSI_COLOR="0;31"
[2025-11-26 22:29:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:29:29] HOME_URL="https://www.centos.org/"
[2025-11-26 22:29:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:29:29] 
[2025-11-26 22:29:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:29:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:29:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:29:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:29:29] 
[2025-11-26 22:29:29] 2025-11-27 03:28:32,726 | INFO     | ***************************************
[2025-11-26 22:29:29] 2025-11-27 03:28:33,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 22:29:29] 2025-11-27 03:28:33,314 | INFO     | sufficient remaining disk space (76956041216 B)
[2025-11-26 22:29:29] 2025-11-27 03:28:33,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:29:29] 2025-11-27 03:28:33,339 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:29:29] 2025-11-27 03:28:33,339 | INFO     | update_server=False
[2025-11-26 22:29:29] 2025-11-27 03:28:33,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:29:29] 2025-11-27 03:28:33,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:29:29] 2025-11-27 03:28:33,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:29:29] 2025-11-27 03:28:33,781 | INFO     | all data control threads have been joined
[2025-11-26 22:29:29] 2025-11-27 03:28:33,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:29:29] 2025-11-27 03:28:33,934 | INFO     | aborting loop
[2025-11-26 22:29:29] 2025-11-27 03:28:34,312 | INFO     | all job control threads have been joined
[2025-11-26 22:29:29] 2025-11-27 03:28:34,345 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:34,412 | INFO     | all payload control threads have been joined
[2025-11-26 22:29:29] 2025-11-27 03:28:34,489 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:34,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:29:29] 2025-11-27 03:28:34,801 | INFO     | [data] control thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:34,846 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:34,854 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:34,860 | INFO     | [job] validate thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:34,973 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,318 | INFO     | [job] control thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,349 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,377 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,419 | INFO     | [payload] control thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,508 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,741 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:35,797 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:28:37,573 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:29:29] 2025-11-27 03:29:03,451 | INFO     | PID=1562636 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:29:29] 2025-11-27 03:29:03,452 | INFO     | .. there are 20 such processes running
[2025-11-26 22:29:29] 2025-11-27 03:29:03,465 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:29:29] 2025-11-27 03:29:03,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:29:29] 2025-11-27 03:29:03,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:29:29] 2025-11-27 03:29:22,116 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:29:29] 2025-11-27 03:29:22,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870153733952)>', '<ExcThread(monitor, started 139869183514368)>']
[2025-11-26 22:29:29] 2025-11-27 03:29:22,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:29:29] 2025-11-27 03:29:22,584 | INFO     | [monitor] control thread has ended
[2025-11-26 22:29:29] 2025-11-27 03:29:27,594 | INFO     | all workflow threads have been joined
[2025-11-26 22:29:29] 2025-11-27 03:29:27,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:29:29] 2025-11-27 03:29:27,595 | INFO     | traces error code: 0
[2025-11-26 22:29:29] 2025-11-27 03:29:27,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:29:29] 2025-11-27 03:29:29,007 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:29:29] 2025-11-27 03:29:29,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:29:29] 2025-11-27 03:29:29,048 [wrapper] pilotpid: 1562636
[2025-11-26 22:29:29] 2025-11-27 03:29:29,050 [wrapper] Pilot exit status: 0
[2025-11-26 22:29:29] 2025-11-27 03:29:29,063 [wrapper] pandaids: 6896715524
[2025-11-26 22:29:29] 2025-11-27 03:29:29,172 [wrapper] cleanup supervisor_pilot 1010918 1562637
[2025-11-26 22:29:29] 2025-11-27 03:29:29,177 [wrapper] Test setup, not cleaning
[2025-11-26 22:29:29] 2025-11-27 03:29:29,191 [wrapper] apfmon messages muted
[2025-11-26 22:29:29] 2025-11-27 03:29:29,198 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:29:29] 2025-11-27 03:29:29,201 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:29:29]  *** Error codes and diagnostics ***
[2025-11-26 22:29:29]     "exeErrorCode": 0,
[2025-11-26 22:29:29]     "exeErrorDiag": "",
[2025-11-26 22:29:29]     "pilotErrorCode": 0,
[2025-11-26 22:29:29]     "pilotErrorDiag": "",
[2025-11-26 22:29:29]  *** Listing of results directory ***
[2025-11-26 22:29:29] total 1332792
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 02:01 queuedata.json
[2025-11-26 22:29:29] -rwx------. 1 boincer umatlas     36292 Nov 25 02:04 runpilot2-wrapper.sh
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 02:04 pilot3.tar.gz
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:29:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 22:29:29] -rw-r--r--. 2 boincer umatlas 408454394 Nov 26 00:04 EVNT.47483658._002130.pool.root.1
[2025-11-26 22:29:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 22:29:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 22:29:29] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:04 input.tar.gz
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:04 pandaJob.out
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-26 22:29:29] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:18 boinc_task_state.xml
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 22:21 init_data.xml
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas 927027225 Nov 26 22:27 HITS.47556161._001136.pool.root.1
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas      1051 Nov 26 22:28 memory_monitor_summary.json
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas   2371355 Nov 26 22:28 log.47556161._001136.job.log.tgz.1
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas      8580 Nov 26 22:28 heartbeat.json
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas        95 Nov 26 22:29 pilot_heartbeat.json
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:29 wrapper_checkpoint.txt
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas      4824 Nov 26 22:29 pilotlog.txt
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas  10313408 Nov 26 22:29 log.47556161._001136.job.log.1
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:29 boinc_mmap_file
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas       353 Nov 26 22:29 output.list
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:29 runtime_log
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas  12707840 Nov 26 22:29 result.tar.gz
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 22:29 runtime_log.err
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas       661 Nov 26 22:29 6WpNDmNH2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMEMKDmCg6Com.diag
[2025-11-26 22:29:29] -rw-r--r--. 1 boincer umatlas     21160 Nov 26 22:29 stderr.txt
[2025-11-26 22:29:29] HITS file was successfully produced:
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas 927027225 Nov 26 22:27 shared/HITS.pool.root.1
[2025-11-26 22:29:29]  *** Contents of shared directory: ***
[2025-11-26 22:29:29] total 1317204
[2025-11-26 22:29:29] -rw-r--r--. 2 boincer umatlas 408454394 Nov 26 00:04 ATLAS.root_0
[2025-11-26 22:29:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 22:29:29] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:04 input.tar.gz
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas 927027225 Nov 26 22:27 HITS.pool.root.1
[2025-11-26 22:29:29] -rw-------. 1 boincer umatlas  12707840 Nov 26 22:29 result.tar.gz
22:29:50 (1555258): run_atlas exited; CPU time 199167.740360
22:29:50 (1555258): called boinc_finish(0)

</stderr_txt>
]]>

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