Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:40 (4125748): wrapper (7.7.26015): starting
08:13:40 (4125748): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 08:13:40] Arguments: --nthreads 9
[2025-11-26 08:13:40] Threads: 9
[2025-11-26 08:13:40] Checking for CVMFS
[2025-11-26 08:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:13:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:13:40] 2.13.3.0 9393 30048 348280 153322 3 527 21165344 32935936 22935 16776704 0 111476782 99.532 132665392 39160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:13:40] CVMFS is ok
[2025-11-26 08:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:13:40] Further information can be found at the LHC@home message board.
[2025-11-26 08:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:13:40] Checking for apptainer binary...
[2025-11-26 08:13:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:13:40] Running /usr/bin/apptainer --version
[2025-11-26 08:13:40] apptainer version 1.4.4-1.el9
[2025-11-26 08:13:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:13:41] c6-6-39-1.aglt2.org
[2025-11-26 08:13:41] apptainer works
[2025-11-26 08:13:41] Set ATHENA_PROC_NUMBER=9
[2025-11-26 08:13:41] Set ATHENA_CORE_NUMBER=9
[2025-11-26 08:13:41] Starting ATLAS job with PandaID=6891106805
[2025-11-26 08:13:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:13:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:13:01] 2025-11-26 23:12:17,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,101 | INFO     | time since job start (35904s) is within the limit (172800.0s)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,196 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 18:13:01] 2025-11-26 23:12:18,204 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3109.3681785714284
[2025-11-26 18:13:01] 2025-11-26 23:12:18,213 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6891106805/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,214 | INFO     | extracted standard info from prmon json
[2025-11-26 18:13:01] 2025-11-26 23:12:18,214 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:13:01] 2025-11-26 23:12:18,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:13:01] 2025-11-26 23:12:18,222 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:13:01] 2025-11-26 23:12:18,223 | INFO     | sum of square deviations: 63035729644.91658
[2025-11-26 18:13:01] 2025-11-26 23:12:18,230 | INFO     | sum of deviations: 867846866987.465
[2025-11-26 18:13:01] 2025-11-26 23:12:18,230 | INFO     | mean x: 1764180768.297619
[2025-11-26 18:13:01] 2025-11-26 23:12:18,230 | INFO     | mean y: 3067763.974489796
[2025-11-26 18:13:01] 2025-11-26 23:12:18,230 | INFO     | intersect: -24285359786.417095
[2025-11-26 18:13:01] 2025-11-26 23:12:18,231 | INFO     | chi2: 5.122463318460595
[2025-11-26 18:13:01] 2025-11-26 23:12:18,231 | INFO     | sum of square deviations: 61441368371.7084
[2025-11-26 18:13:01] 2025-11-26 23:12:18,238 | INFO     | sum of deviations: 1061212729662.168
[2025-11-26 18:13:01] 2025-11-26 23:12:18,238 | INFO     | mean x: 1764180615.8044598
[2025-11-26 18:13:01] 2025-11-26 23:12:18,238 | INFO     | mean y: 3086245.089193825
[2025-11-26 18:13:01] 2025-11-26 23:12:18,238 | INFO     | intersect: -30467767131.558655
[2025-11-26 18:13:01] 2025-11-26 23:12:18,240 | INFO     | chi2: 2.215649663457471
[2025-11-26 18:13:01] 2025-11-26 23:12:18,240 | INFO     | current chi2=2.215649663457471 (change=56.74640254674739 %)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,240 | INFO     | sum of square deviations: 59874088445.565414
[2025-11-26 18:13:01] 2025-11-26 23:12:18,246 | INFO     | sum of deviations: 1080155204239.439
[2025-11-26 18:13:01] 2025-11-26 23:12:18,247 | INFO     | mean x: 1764180463.3096886
[2025-11-26 18:13:01] 2025-11-26 23:12:18,247 | INFO     | mean y: 3088071.8858131487
[2025-11-26 18:13:01] 2025-11-26 23:12:18,247 | INFO     | intersect: -31823512685.36784
[2025-11-26 18:13:01] 2025-11-26 23:12:18,247 | INFO     | chi2: 2.0324010307481184
[2025-11-26 18:13:01] 2025-11-26 23:12:18,248 | INFO     | current chi2=2.0324010307481184 (change=8.270650172347077 %)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,248 | INFO     | right removable region: 577
[2025-11-26 18:13:01] 2025-11-26 23:12:18,248 | INFO     | sum of square deviations: 61441118028.31542
[2025-11-26 18:13:01] 2025-11-26 23:12:18,254 | INFO     | sum of deviations: 714495324648.8606
[2025-11-26 18:13:01] 2025-11-26 23:12:18,255 | INFO     | mean x: 1764180920.8027444
[2025-11-26 18:13:01] 2025-11-26 23:12:18,255 | INFO     | mean y: 3082391.7118353345
[2025-11-26 18:13:01] 2025-11-26 23:12:18,255 | INFO     | intersect: -20512478851.28794
[2025-11-26 18:13:01] 2025-11-26 23:12:18,255 | INFO     | chi2: 3.2186728884561293
[2025-11-26 18:13:01] 2025-11-26 23:12:18,256 | INFO     | current chi2=3.2186728884561293 (change=37.16552587391868 %)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,256 | INFO     | sum of square deviations: 59873836820.81704
[2025-11-26 18:13:01] 2025-11-26 23:12:18,262 | INFO     | sum of deviations: 665144582211.9886
[2025-11-26 18:13:01] 2025-11-26 23:12:18,263 | INFO     | mean x: 1764181073.2975779
[2025-11-26 18:13:01] 2025-11-26 23:12:18,263 | INFO     | mean y: 3087191.5640138406
[2025-11-26 18:13:01] 2025-11-26 23:12:18,263 | INFO     | intersect: -19595380941.629566
[2025-11-26 18:13:01] 2025-11-26 23:12:18,263 | INFO     | chi2: 3.1542906976609055
[2025-11-26 18:13:01] 2025-11-26 23:12:18,263 | INFO     | current chi2=3.1542906976609055 (change=2.000271323815866 %)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,264 | INFO     | left removable region: 20
[2025-11-26 18:13:01] 2025-11-26 23:12:18,264 | INFO     | sum of square deviations: 53582121522.27637
[2025-11-26 18:13:01] 2025-11-26 23:12:18,269 | INFO     | sum of deviations: 808153698683.0619
[2025-11-26 18:13:01] 2025-11-26 23:12:18,270 | INFO     | mean x: 1764181042.8025134
[2025-11-26 18:13:01] 2025-11-26 23:12:18,270 | INFO     | mean y: 3114520.527827648
[2025-11-26 18:13:01] 2025-11-26 23:12:18,270 | INFO     | intersect: -26605190533.139297
[2025-11-26 18:13:01] 2025-11-26 23:12:18,270 | INFO     | chi2: 0.019476046242992474
[2025-11-26 18:13:01] 2025-11-26 23:12:18,271 | INFO     | current memory leak: 15.08 B/s (using 557 data points, chi2=0.02)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | could have reported an average CPU frequency of 3004 MHz (23 samples)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | ..............................
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . Timing measurements:
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . get job = 0 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . initial setup = 2 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . payload setup = 7 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . stage-in = 0 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . payload execution = 35864 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . stage-out = 3 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | . log creation = 0 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,272 | INFO     | ..............................
[2025-11-26 18:13:01] 2025-11-26 23:12:18,595 | INFO     | 
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | job summary report
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | --------------------------------------------------
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | PanDA job id: 6891106805
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | task id: 47483661
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | errors: (none)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | pilot state: finished 
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | transexitcode: 0
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | exeerrorcode: 0
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | exeerrordiag: 
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | exitcode: 0
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | exitmsg: OK
[2025-11-26 18:13:01] 2025-11-26 23:12:18,596 | INFO     | cpuconsumptiontime: 247790 s
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | nevents: 1000
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | neventsw: 0
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | pid: 4138459
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | pgrp: 4138459
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | corecount: 9
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | event service: False
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | sizes: {0: 2284190, 1: 2284332, 6: 2284594, 11: 2284622, 35875: 2327138, 35876: 2327137, 35879: 2336315, 35882: 2336371, 35887: 2336617}
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | --------------------------------------------------
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | 
[2025-11-26 18:13:01] 2025-11-26 23:12:18,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:13:01] 2025-11-26 23:12:18,619 | INFO     | job 6891106805 has completed (purged errors)
[2025-11-26 18:13:01] 2025-11-26 23:12:18,619 | INFO     | overall cleanup function is called
[2025-11-26 18:13:01] 2025-11-26 23:12:19,636 | INFO     | --- collectZombieJob: --- 10, [4138459]
[2025-11-26 18:13:01] 2025-11-26 23:12:19,637 | INFO     | zombie collector waiting for pid 4138459
[2025-11-26 18:13:01] 2025-11-26 23:12:19,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:13:01] 2025-11-26 23:12:19,637 | INFO     | collected zombie processes
[2025-11-26 18:13:01] 2025-11-26 23:12:19,637 | INFO     | will attempt to kill all subprocesses of pid=4138459
[2025-11-26 18:13:01] 2025-11-26 23:12:19,984 | INFO     | process IDs to be killed: [4138459] (in reverse order)
[2025-11-26 18:13:01] 2025-11-26 23:12:20,110 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:13:01] 2025-11-26 23:12:20,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:13:01] 2025-11-26 23:12:20,130 | INFO     | did not find any defunct processes belonging to 4138459
[2025-11-26 18:13:01] 2025-11-26 23:12:20,145 | INFO     | did not find any defunct processes belonging to 4138459
[2025-11-26 18:13:01] 2025-11-26 23:12:20,146 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:13:01] 2025-11-26 23:12:20,146 | INFO     | ready for new job
[2025-11-26 18:13:01] 2025-11-26 23:12:20,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:13:01] 2025-11-26 23:12:20,150 | INFO     | ***************************************
[2025-11-26 18:13:01] 2025-11-26 23:12:20,150 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:13:01] 2025-11-26 23:12:20,150 | INFO     | ***************************************
[2025-11-26 18:13:01] 2025-11-26 23:12:20,150 | INFO     | 
[2025-11-26 18:13:01] 2025-11-26 23:12:20,153 | INFO     | architecture information:
[2025-11-26 18:13:01] 2025-11-26 23:12:20,154 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:13:01] 2025-11-26 23:12:20,168 | INFO     | cat /etc/os-release:
[2025-11-26 18:13:01] NAME="CentOS Linux"
[2025-11-26 18:13:01] VERSION="7 (Core)"
[2025-11-26 18:13:01] ID="centos"
[2025-11-26 18:13:01] ID_LIKE="rhel fedora"
[2025-11-26 18:13:01] VERSION_ID="7"
[2025-11-26 18:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:13:01] ANSI_COLOR="0;31"
[2025-11-26 18:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:13:01] HOME_URL="https://www.centos.org/"
[2025-11-26 18:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:13:01] 
[2025-11-26 18:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:13:01] 
[2025-11-26 18:13:01] 2025-11-26 23:12:20,169 | INFO     | ***************************************
[2025-11-26 18:13:01] 2025-11-26 23:12:20,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 18:13:01] 2025-11-26 23:12:20,692 | INFO     | sufficient remaining disk space (70322749440 B)
[2025-11-26 18:13:01] 2025-11-26 23:12:20,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:13:01] 2025-11-26 23:12:20,692 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:13:01] 2025-11-26 23:12:20,693 | INFO     | update_server=False
[2025-11-26 18:13:01] 2025-11-26 23:12:20,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:13:01] 2025-11-26 23:12:20,724 | INFO     | all data control threads have been joined
[2025-11-26 18:13:01] 2025-11-26 23:12:20,922 | INFO     | all payload control threads have been joined
[2025-11-26 18:13:01] 2025-11-26 23:12:21,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:13:01] 2025-11-26 23:12:21,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:13:01] 2025-11-26 23:12:21,135 | INFO     | aborting loop
[2025-11-26 18:13:01] 2025-11-26 23:12:21,699 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:21,729 | INFO     | [data] control thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:21,838 | INFO     | all job control threads have been joined
[2025-11-26 18:13:01] 2025-11-26 23:12:21,928 | INFO     | [payload] control thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:21,981 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,084 | INFO     | [job] validate thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,141 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,227 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,325 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,513 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,713 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,842 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:22,860 | INFO     | [job] control thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:23,128 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:23,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:13:01] 2025-11-26 23:12:23,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:13:01] 2025-11-26 23:12:24,374 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:27,288 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:31,182 | INFO     | job.realtimelogging is not enabled
[2025-11-26 18:13:01] 2025-11-26 23:12:32,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:13:01] 2025-11-26 23:12:51,610 | INFO     | PID=4131415 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:13:01] 2025-11-26 23:12:51,611 | INFO     | .. there are 32 such processes running
[2025-11-26 18:13:01] 2025-11-26 23:12:51,611 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:13:01] 2025-11-26 23:12:51,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:13:01] 2025-11-26 23:12:51,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:13:01] 2025-11-26 23:12:55,391 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:13:01] 2025-11-26 23:12:55,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528334763840)>', '<ExcThread(monitor, started 140527689258752)>']
[2025-11-26 18:13:01] 2025-11-26 23:12:55,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:13:01] 2025-11-26 23:12:55,634 | INFO     | [monitor] control thread has ended
[2025-11-26 18:13:01] 2025-11-26 23:13:00,455 | INFO     | all workflow threads have been joined
[2025-11-26 18:13:01] 2025-11-26 23:13:00,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:13:01] 2025-11-26 23:13:00,456 | INFO     | traces error code: 0
[2025-11-26 18:13:01] 2025-11-26 23:13:00,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:13:01] 2025-11-26 23:13:00,699 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:13:01] 2025-11-26 23:13:00,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:13:01] 2025-11-26 23:13:00,789 [wrapper] pilotpid: 4131415
[2025-11-26 18:13:01] 2025-11-26 23:13:00,808 [wrapper] Pilot exit status: 0
[2025-11-26 18:13:01] 2025-11-26 23:13:00,849 [wrapper] pandaids: 6891106805
[2025-11-26 18:13:01] 2025-11-26 23:13:00,924 [wrapper] cleanup supervisor_pilot 2017977 4131416
[2025-11-26 18:13:01] 2025-11-26 23:13:00,928 [wrapper] Test setup, not cleaning
[2025-11-26 18:13:01] 2025-11-26 23:13:00,931 [wrapper] apfmon messages muted
[2025-11-26 18:13:01] 2025-11-26 23:13:00,933 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:13:01] 2025-11-26 23:13:00,935 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:13:01]  *** Error codes and diagnostics ***
[2025-11-26 18:13:01]     "exeErrorCode": 0,
[2025-11-26 18:13:01]     "exeErrorDiag": "",
[2025-11-26 18:13:01]     "pilotErrorCode": 0,
[2025-11-26 18:13:01]     "pilotErrorDiag": "",
[2025-11-26 18:13:01]  *** Listing of results directory ***
[2025-11-26 18:13:01] total 1322424
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-26 18:13:01] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:13:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:13 run_atlas
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:13 job.xml
[2025-11-26 18:13:01] -rw-r--r--. 2 boincer umatlas 410695556 Nov 26 08:13 EVNT.47483658._000279.pool.root.1
[2025-11-26 18:13:01] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 08:13 start_atlas.sh
[2025-11-26 18:13:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:13 shared
[2025-11-26 18:13:01] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 08:13 input.tar.gz
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:13 boinc_lockfile
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 08:13 pandaJob.out
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas    991830 Nov 26 08:13 agis_schedconf.cvmfs.json
[2025-11-26 18:13:01] drwx------. 5 boincer umatlas      4096 Nov 26 08:13 pilot3
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:03 boinc_task_state.xml
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 18:03 init_data.xml
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas 925867408 Nov 26 18:11 HITS.47483661._002483.pool.root.1
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas        95 Nov 26 18:11 pilot_heartbeat.json
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas      1056 Nov 26 18:12 memory_monitor_summary.json
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas   1972735 Nov 26 18:12 log.47483661._002483.job.log.tgz.1
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas      8622 Nov 26 18:12 heartbeat.json
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:12 boinc_mmap_file
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:12 wrapper_checkpoint.txt
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas      4896 Nov 26 18:13 pilotlog.txt
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas   4871064 Nov 26 18:13 log.47483661._002483.job.log.1
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas       353 Nov 26 18:13 output.list
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:13 runtime_log
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas   6860800 Nov 26 18:13 result.tar.gz
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas       661 Nov 26 18:13 tI7MDmmtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZSKODmFyISrn.diag
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas      8709 Nov 26 18:13 runtime_log.err
[2025-11-26 18:13:01] -rw-r--r--. 1 boincer umatlas     21333 Nov 26 18:13 stderr.txt
[2025-11-26 18:13:01] HITS file was successfully produced:
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas 925867408 Nov 26 18:11 shared/HITS.pool.root.1
[2025-11-26 18:13:01]  *** Contents of shared directory: ***
[2025-11-26 18:13:01] total 1312540
[2025-11-26 18:13:01] -rw-r--r--. 2 boincer umatlas 410695556 Nov 26 08:13 ATLAS.root_0
[2025-11-26 18:13:01] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 08:13 start_atlas.sh
[2025-11-26 18:13:01] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 08:13 input.tar.gz
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas 925867408 Nov 26 18:11 HITS.pool.root.1
[2025-11-26 18:13:01] -rw-------. 1 boincer umatlas   6860800 Nov 26 18:13 result.tar.gz
18:13:02 (4125748): run_atlas exited; CPU time 248824.534127
18:13:02 (4125748): called boinc_finish(0)

</stderr_txt>
]]>

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