Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:39 (3571207): wrapper (7.7.26015): starting
00:03:39 (3571207): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:03:39] Arguments: --nthreads 9
[2025-11-26 00:03:39] Threads: 9
[2025-11-26 00:03:39] Checking for CVMFS
[2025-11-26 00:03:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:41] 2.13.3.0 11836 28126 351440 153309 0 399 18139214 32935936 36090 16776704 0 120491292 99.536 135261805 35745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:03:41] CVMFS is ok
[2025-11-26 00:03:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:41] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:41] Checking for apptainer binary...
[2025-11-26 00:03:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:41] Running /usr/bin/apptainer --version
[2025-11-26 00:03:41] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:42] c6-2-11-1.aglt2.org
[2025-11-26 00:03:42] apptainer works
[2025-11-26 00:03:42] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:03:42] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:03:42] Starting ATLAS job with PandaID=6891105220
[2025-11-26 00:03:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:00:51]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:00:51] 2025-11-27 22:59:35,157 | INFO     | time since job start (150878s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:36,358 | INFO     | monitor loop #7638: job 0:6891105220 is in state 'finished'
[2025-11-27 18:00:51] 2025-11-27 22:59:36,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:00:51] 2025-11-27 22:59:37,164 | INFO     | time since job start (150880s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:38,894 | INFO     | monitor loop #7639: job 0:6891105220 is in state 'finished'
[2025-11-27 18:00:51] 2025-11-27 22:59:38,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:00:51] 2025-11-27 22:59:39,171 | INFO     | time since job start (150882s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:41,178 | INFO     | time since job start (150884s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:41,430 | INFO     | monitor loop #7640: job 0:6891105220 is in state 'finished'
[2025-11-27 18:00:51] 2025-11-27 22:59:41,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:00:51] 2025-11-27 22:59:43,185 | INFO     | time since job start (150886s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:43,935 | INFO     | monitor loop #7641: job 0:6891105220 is in state 'finished'
[2025-11-27 18:00:51] 2025-11-27 22:59:43,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:00:51] 2025-11-27 22:59:44,256 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 18:00:51] 2025-11-27 22:59:44,329 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2667.615114583334
[2025-11-27 18:00:51] 2025-11-27 22:59:44,397 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6891105220/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:00:51] 2025-11-27 22:59:44,398 | INFO     | extracted standard info from prmon json
[2025-11-27 18:00:51] 2025-11-27 22:59:44,399 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:00:51] 2025-11-27 22:59:44,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:00:51] 2025-11-27 22:59:44,606 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:00:51] 2025-11-27 22:59:44,635 | INFO     | sum of square deviations: 4672543488812.485
[2025-11-27 18:00:51] 2025-11-27 22:59:45,213 | INFO     | time since job start (150888s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:45,356 | INFO     | sum of deviations: 18185594301960.016
[2025-11-27 18:00:51] 2025-11-27 22:59:45,357 | INFO     | mean x: 1764208965.7736843
[2025-11-27 18:00:51] 2025-11-27 22:59:45,357 | INFO     | mean y: 3043041.923076923
[2025-11-27 18:00:51] 2025-11-27 22:59:45,357 | INFO     | intersect: -6863279035.604455
[2025-11-27 18:00:51] 2025-11-27 22:59:45,410 | INFO     | chi2: 29.953750371914467
[2025-11-27 18:00:51] 2025-11-27 22:59:45,434 | INFO     | sum of square deviations: 4644226549591.294
[2025-11-27 18:00:51] 2025-11-27 22:59:46,674 | INFO     | monitor loop #7642: job 0:6891105220 is in state 'finished'
[2025-11-27 18:00:51] 2025-11-27 22:59:46,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:00:51] 2025-11-27 22:59:46,710 | INFO     | sum of deviations: 19045543724347.67
[2025-11-27 18:00:51] 2025-11-27 22:59:46,711 | INFO     | mean x: 1764208813.2803245
[2025-11-27 18:00:51] 2025-11-27 22:59:46,711 | INFO     | mean y: 3047672.509939148
[2025-11-27 18:00:51] 2025-11-27 22:59:46,711 | INFO     | intersect: -7231809570.870418
[2025-11-27 18:00:51] 2025-11-27 22:59:46,771 | INFO     | chi2: 26.71593448812349
[2025-11-27 18:00:51] 2025-11-27 22:59:46,772 | INFO     | current chi2=26.71593448812349 (change=10.809383945547097 %)
[2025-11-27 18:00:51] 2025-11-27 22:59:46,772 | INFO     | right removable region: 2464
[2025-11-27 18:00:51] 2025-11-27 22:59:46,776 | INFO     | sum of square deviations: 4644215589748.218
[2025-11-27 18:00:51] 2025-11-27 22:59:47,279 | INFO     | time since job start (150890s) is within the limit (172800.0s)
[2025-11-27 18:00:51] 2025-11-27 22:59:47,514 | INFO     | sum of deviations: 17147841028123.955
[2025-11-27 18:00:51] 2025-11-27 22:59:47,514 | INFO     | mean x: 1764209118.2965517
[2025-11-27 18:00:51] 2025-11-27 22:59:47,514 | INFO     | mean y: 3048628.7647058824
[2025-11-27 18:00:51] 2025-11-27 22:59:47,515 | INFO     | intersect: -6510942144.552539
[2025-11-27 18:00:51] 2025-11-27 22:59:47,520 | INFO     | chi2: 25.95888049440008
[2025-11-27 18:00:51] 2025-11-27 22:59:47,521 | INFO     | current chi2=25.95888049440008 (change=13.33679364992003 %)
[2025-11-27 18:00:51] 2025-11-27 22:59:47,521 | INFO     | left removable region: 10
[2025-11-27 18:00:51] 2025-11-27 22:59:47,525 | INFO     | sum of square deviations: 4582310645106.089
[2025-11-27 18:00:51] 2025-11-27 22:59:47,739 | INFO     | sum of deviations: 17202993111983.45
[2025-11-27 18:00:51] 2025-11-27 22:59:47,740 | INFO     | mean x: 1764209087.8276284
[2025-11-27 18:00:51] 2025-11-27 22:59:47,740 | INFO     | mean y: 3059412.0696821515
[2025-11-27 18:00:51] 2025-11-27 22:59:47,740 | INFO     | intersect: -6620166103.732214
[2025-11-27 18:00:51] 2025-11-27 22:59:47,748 | INFO     | chi2: 18.75277373924697
[2025-11-27 18:00:51] 2025-11-27 22:59:47,748 | INFO     | current memory leak: 3.75 B/s (using 2454 data points, chi2=18.75)
[2025-11-27 18:00:51] 2025-11-27 22:59:47,755 | INFO     | could have reported an average CPU frequency of 2661 MHz (85 samples)
[2025-11-27 18:00:51] 2025-11-27 22:59:47,755 | INFO     | ..............................
[2025-11-27 18:00:51] 2025-11-27 22:59:47,755 | INFO     | . Timing measurements:
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . get job = 1 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . initial setup = 8 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . payload setup = 49 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . stage-in = 0 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . payload execution = 150713 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . stage-out = 17 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | . log creation = 4 s
[2025-11-27 18:00:51] 2025-11-27 22:59:47,756 | INFO     | ..............................
[2025-11-27 18:00:51] 2025-11-27 22:59:48,325 | INFO     | 
[2025-11-27 18:00:51] 2025-11-27 22:59:48,325 | INFO     | job summary report
[2025-11-27 18:00:51] 2025-11-27 22:59:48,325 | INFO     | --------------------------------------------------
[2025-11-27 18:00:51] 2025-11-27 22:59:48,325 | INFO     | PanDA job id: 6891105220
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | task id: 47483661
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | errors: (none)
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | pilot state: finished 
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | transexitcode: 0
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | exeerrorcode: 0
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | exeerrordiag: 
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | exitcode: 0
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | exitmsg: OK
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | cpuconsumptiontime: 274362 s
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | nevents: 1000
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | neventsw: 0
[2025-11-27 18:00:51] 2025-11-27 22:59:48,326 | INFO     | pid: 3635305
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | pgrp: 3635305
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | corecount: 9
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | event service: False
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | sizes: {0: 2283476, 1: 2284077, 2: 2284189, 3: 2284388, 4: 2284388, 15: 2284416, 26: 2284572, 36: 2284862, 37: 2284890, 150767: 2375983, 150768: 2375982, 150787: 2
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | --------------------------------------------------
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | 
[2025-11-27 18:00:51] 2025-11-27 22:59:48,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 18:00:51] 2025-11-27 22:59:48,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:00:51] 2025-11-27 22:59:48,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:00:51] 2025-11-27 22:59:48,394 | INFO     | job 6891105220 has completed (purged errors)
[2025-11-27 18:00:51] 2025-11-27 22:59:48,394 | INFO     | overall cleanup function is called
[2025-11-27 18:00:51] 2025-11-27 22:59:49,429 | INFO     | --- collectZombieJob: --- 10, [3635305]
[2025-11-27 18:00:51] 2025-11-27 22:59:49,429 | INFO     | zombie collector waiting for pid 3635305
[2025-11-27 18:00:51] 2025-11-27 22:59:49,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:00:51] 2025-11-27 22:59:49,429 | INFO     | collected zombie processes
[2025-11-27 18:00:51] 2025-11-27 22:59:49,429 | INFO     | will attempt to kill all subprocesses of pid=3635305
[2025-11-27 18:00:51] 2025-11-27 22:59:51,731 | INFO     | process IDs to be killed: [3635305] (in reverse order)
[2025-11-27 18:00:51] 2025-11-27 22:59:52,036 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:00:51] 2025-11-27 22:59:52,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:00:51] 2025-11-27 22:59:52,177 | INFO     | did not find any defunct processes belonging to 3635305
[2025-11-27 18:00:51] 2025-11-27 22:59:52,235 | INFO     | did not find any defunct processes belonging to 3635305
[2025-11-27 18:00:51] 2025-11-27 22:59:52,261 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:00:51] 2025-11-27 22:59:52,262 | INFO     | ready for new job
[2025-11-27 18:00:51] 2025-11-27 22:59:52,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:00:51] 2025-11-27 22:59:52,294 | INFO     | ***************************************
[2025-11-27 18:00:51] 2025-11-27 22:59:52,294 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:00:51] 2025-11-27 22:59:52,294 | INFO     | ***************************************
[2025-11-27 18:00:51] 2025-11-27 22:59:52,295 | INFO     | 
[2025-11-27 18:00:51] 2025-11-27 22:59:52,311 | INFO     | architecture information:
[2025-11-27 18:00:51] 2025-11-27 22:59:52,325 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:00:51] 2025-11-27 22:59:52,423 | INFO     | cat /etc/os-release:
[2025-11-27 18:00:51] NAME="CentOS Linux"
[2025-11-27 18:00:51] VERSION="7 (Core)"
[2025-11-27 18:00:51] ID="centos"
[2025-11-27 18:00:51] ID_LIKE="rhel fedora"
[2025-11-27 18:00:51] VERSION_ID="7"
[2025-11-27 18:00:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:00:51] ANSI_COLOR="0;31"
[2025-11-27 18:00:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:00:51] HOME_URL="https://www.centos.org/"
[2025-11-27 18:00:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:00:51] 
[2025-11-27 18:00:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:00:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:00:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:00:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:00:51] 
[2025-11-27 18:00:51] 2025-11-27 22:59:52,424 | INFO     | ***************************************
[2025-11-27 18:00:51] 2025-11-27 22:59:52,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 18:00:51] 2025-11-27 22:59:53,048 | INFO     | sufficient remaining disk space (83948994560 B)
[2025-11-27 18:00:51] 2025-11-27 22:59:53,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:00:51] 2025-11-27 22:59:53,057 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:00:51] 2025-11-27 22:59:53,057 | INFO     | update_server=False
[2025-11-27 18:00:51] 2025-11-27 22:59:53,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:00:51] 2025-11-27 22:59:53,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:00:51] 2025-11-27 22:59:53,059 | INFO     | aborting loop
[2025-11-27 18:00:51] 2025-11-27 22:59:53,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:00:51] 2025-11-27 22:59:53,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:00:51] 2025-11-27 22:59:53,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:00:51] 2025-11-27 22:59:53,673 | INFO     | all data control threads have been joined
[2025-11-27 18:00:51] 2025-11-27 22:59:54,064 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,067 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,367 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,367 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,434 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,559 | INFO     | all payload control threads have been joined
[2025-11-27 18:00:51] 2025-11-27 22:59:54,681 | INFO     | [data] control thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,761 | INFO     | all job control threads have been joined
[2025-11-27 18:00:51] 2025-11-27 22:59:54,788 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,812 | INFO     | [job] validate thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:54,997 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:55,126 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:55,264 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:55,440 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:55,565 | INFO     | [payload] control thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:55,767 | INFO     | [job] control thread has finished
[2025-11-27 18:00:51] 2025-11-27 22:59:57,073 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:00:51] 2025-11-27 23:00:22,519 | INFO     | PID=3593046 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 18:00:51] 2025-11-27 23:00:22,520 | INFO     | .. there are 62 such processes running
[2025-11-27 18:00:51] 2025-11-27 23:00:22,520 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:00:51] 2025-11-27 23:00:22,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:00:51] 2025-11-27 23:00:22,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:00:51] 2025-11-27 23:00:43,526 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:00:51] 2025-11-27 23:00:43,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719434622784)>', '<ExcThread(monitor, started 139719077771008)>']
[2025-11-27 18:00:51] 2025-11-27 23:00:44,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:00:51] 2025-11-27 23:00:44,687 | INFO     | [monitor] control thread has ended
[2025-11-27 18:00:51] 2025-11-27 23:00:48,816 | INFO     | all workflow threads have been joined
[2025-11-27 18:00:51] 2025-11-27 23:00:48,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:00:51] 2025-11-27 23:00:48,816 | INFO     | traces error code: 0
[2025-11-27 18:00:51] 2025-11-27 23:00:48,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:00:51] 2025-11-27 23:00:50,153 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:00:51] 2025-11-27 23:00:50,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:00:51] 2025-11-27 23:00:50,221 [wrapper] pilotpid: 3593046
[2025-11-27 18:00:51] 2025-11-27 23:00:50,232 [wrapper] Pilot exit status: 0
[2025-11-27 18:00:51] 2025-11-27 23:00:50,332 [wrapper] pandaids: 6891105220
[2025-11-27 18:00:51] 2025-11-27 23:00:50,486 [wrapper] cleanup supervisor_pilot  432357 3593047
[2025-11-27 18:00:51] 2025-11-27 23:00:50,521 [wrapper] Test setup, not cleaning
[2025-11-27 18:00:51] 2025-11-27 23:00:50,549 [wrapper] apfmon messages muted
[2025-11-27 18:00:51] 2025-11-27 23:00:50,573 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:00:51] 2025-11-27 23:00:50,617 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:00:51]  *** Error codes and diagnostics ***
[2025-11-27 18:00:51]     "exeErrorCode": 0,
[2025-11-27 18:00:51]     "exeErrorDiag": "",
[2025-11-27 18:00:51]     "pilotErrorCode": 0,
[2025-11-27 18:00:51]     "pilotErrorDiag": "",
[2025-11-27 18:00:51]  *** Listing of results directory ***
[2025-11-27 18:00:51] total 1345248
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-27 18:00:51] -rwx------. 1 boincer umatlas     36292 Nov 18 01:59 runpilot2-wrapper.sh
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:00:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-27 18:00:51] -rw-r--r--. 2 boincer umatlas 409469447 Nov 26 00:03 EVNT.47483658._000238.pool.root.1
[2025-11-27 18:00:51] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:03 start_atlas.sh
[2025-11-27 18:00:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-27 18:00:51] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:03 input.tar.gz
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:03 pandaJob.out
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-27 18:00:51] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas       534 Nov 27 17:08 boinc_task_state.xml
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas 923534376 Nov 27 17:56 HITS.47483661._002074.pool.root.1
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas      1072 Nov 27 17:58 memory_monitor_summary.json
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas   3189550 Nov 27 17:59 log.47483661._002074.job.log.tgz.1
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas      8650 Nov 27 17:59 heartbeat.json
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas        95 Nov 27 18:00 pilot_heartbeat.json
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas      6880 Nov 27 18:00 init_data.xml
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas      4824 Nov 27 18:00 pilotlog.txt
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas        30 Nov 27 18:00 wrapper_checkpoint.txt
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:00 boinc_mmap_file
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas  17112106 Nov 27 18:00 log.47483661._002074.job.log.1
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas       353 Nov 27 18:00 output.list
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:00 runtime_log
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas  20326400 Nov 27 18:00 result.tar.gz
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas      8710 Nov 27 18:00 runtime_log.err
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas       670 Nov 27 18:00 5P5LDmfrUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZOKODmRFf0pn.diag
[2025-11-27 18:00:51] -rw-r--r--. 1 boincer umatlas     21825 Nov 27 18:00 stderr.txt
[2025-11-27 18:00:51] HITS file was successfully produced:
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas 923534376 Nov 27 17:56 shared/HITS.pool.root.1
[2025-11-27 18:00:51]  *** Contents of shared directory: ***
[2025-11-27 18:00:51] total 1322224
[2025-11-27 18:00:51] -rw-r--r--. 2 boincer umatlas 409469447 Nov 26 00:03 ATLAS.root_0
[2025-11-27 18:00:51] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:03 start_atlas.sh
[2025-11-27 18:00:51] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:03 input.tar.gz
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas 923534376 Nov 27 17:56 HITS.pool.root.1
[2025-11-27 18:00:51] -rw-------. 1 boincer umatlas  20326400 Nov 27 18:00 result.tar.gz
18:00:53 (3571207): run_atlas exited; CPU time 281721.109822
18:00:53 (3571207): called boinc_finish(0)

</stderr_txt>
]]>

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