Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:35 (1557227): wrapper (7.7.26015): starting
00:04:35 (1557227): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:04:35] Arguments: --nthreads 8
[2025-11-26 00:04:35] Threads: 8
[2025-11-26 00:04:35] Checking for CVMFS
[2025-11-26 00:04:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:36] 2.13.2.0 6956 33322 432368 153309 3 101 35245619 40960000 17485 16776704 0 124778771 99.632 113851830 38705 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:36] CVMFS is ok
[2025-11-26 00:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:36] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:36] Checking for apptainer binary...
[2025-11-26 00:04:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:36] Running /usr/bin/apptainer --version
[2025-11-26 00:04:36] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:36] c-206-34.aglt2.org
[2025-11-26 00:04:36] apptainer works
[2025-11-26 00:04:36] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:04:36] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:04:37] Starting ATLAS job with PandaID=6891107118
[2025-11-26 00:04:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:08:41]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:08:41] 2025-11-27 05:08:03,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,254 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:08:41] 2025-11-27 05:08:04,261 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3268.4052656249996
[2025-11-27 00:08:41] 2025-11-27 05:08:04,272 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6891107118/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,273 | INFO     | extracted standard info from prmon json
[2025-11-27 00:08:41] 2025-11-27 05:08:04,273 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:08:41] 2025-11-27 05:08:04,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:08:41] 2025-11-27 05:08:04,299 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:08:41] 2025-11-27 05:08:04,300 | INFO     | sum of square deviations: 883892881650.4482
[2025-11-27 00:08:41] 2025-11-27 05:08:04,336 | INFO     | sum of deviations: 4797365310324.089
[2025-11-27 00:08:41] 2025-11-27 05:08:04,336 | INFO     | mean x: 1764176795.387165
[2025-11-27 00:08:41] 2025-11-27 05:08:04,336 | INFO     | mean y: 2934381.994358251
[2025-11-27 00:08:41] 2025-11-27 05:08:04,336 | INFO     | intersect: -9572208415.474297
[2025-11-27 00:08:41] 2025-11-27 05:08:04,337 | INFO     | chi2: 5.34749061343184
[2025-11-27 00:08:41] 2025-11-27 05:08:04,338 | INFO     | sum of square deviations: 874574690426.121
[2025-11-27 00:08:41] 2025-11-27 05:08:04,373 | INFO     | sum of deviations: 5204052351075.537
[2025-11-27 00:08:41] 2025-11-27 05:08:04,374 | INFO     | mean x: 1764176642.8973815
[2025-11-27 00:08:41] 2025-11-27 05:08:04,374 | INFO     | mean y: 2941034.658881812
[2025-11-27 00:08:41] 2025-11-27 05:08:04,374 | INFO     | intersect: -10494581597.4098
[2025-11-27 00:08:41] 2025-11-27 05:08:04,375 | INFO     | chi2: 2.9516056954583547
[2025-11-27 00:08:41] 2025-11-27 05:08:04,375 | INFO     | current chi2=2.9516056954583547 (change=44.80391067831883 %)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,377 | INFO     | sum of square deviations: 865322221363.9973
[2025-11-27 00:08:41] 2025-11-27 05:08:04,416 | INFO     | sum of deviations: 5272893155989.9795
[2025-11-27 00:08:41] 2025-11-27 05:08:04,416 | INFO     | mean x: 1764176490.4076705
[2025-11-27 00:08:41] 2025-11-27 05:08:04,417 | INFO     | mean y: 2942167.4651988638
[2025-11-27 00:08:41] 2025-11-27 05:08:04,417 | INFO     | intersect: -10747173699.854029
[2025-11-27 00:08:41] 2025-11-27 05:08:04,418 | INFO     | chi2: 2.7545885725098427
[2025-11-27 00:08:41] 2025-11-27 05:08:04,418 | INFO     | current chi2=2.7545885725098427 (change=6.67491336162086 %)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,418 | INFO     | right removable region: 1407
[2025-11-27 00:08:41] 2025-11-27 05:08:04,419 | INFO     | sum of square deviations: 874572624360.076
[2025-11-27 00:08:41] 2025-11-27 05:08:04,456 | INFO     | sum of deviations: 4394832256362.4634
[2025-11-27 00:08:41] 2025-11-27 05:08:04,457 | INFO     | mean x: 1764176947.893843
[2025-11-27 00:08:41] 2025-11-27 05:08:04,457 | INFO     | mean y: 2940962.7430997877
[2025-11-27 00:08:41] 2025-11-27 05:08:04,457 | INFO     | intersect: -8862259639.903246
[2025-11-27 00:08:41] 2025-11-27 05:08:04,458 | INFO     | chi2: 3.06625913199737
[2025-11-27 00:08:41] 2025-11-27 05:08:04,458 | INFO     | current chi2=3.06625913199737 (change=42.65985013053538 %)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,459 | INFO     | sum of square deviations: 865320502381.955
[2025-11-27 00:08:41] 2025-11-27 05:08:04,495 | INFO     | sum of deviations: 4261469798083.5503
[2025-11-27 00:08:41] 2025-11-27 05:08:04,495 | INFO     | mean x: 1764177100.3806818
[2025-11-27 00:08:41] 2025-11-27 05:08:04,495 | INFO     | mean y: 2943160.6818181816
[2025-11-27 00:08:41] 2025-11-27 05:08:04,495 | INFO     | intersect: -8685152650.11688
[2025-11-27 00:08:41] 2025-11-27 05:08:04,496 | INFO     | chi2: 2.962115586503478
[2025-11-27 00:08:41] 2025-11-27 05:08:04,496 | INFO     | current chi2=2.962115586503478 (change=3.396436537509879 %)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,497 | INFO     | left removable region: 20
[2025-11-27 00:08:41] 2025-11-27 05:08:04,498 | INFO     | sum of square deviations: 827177962551.8486
[2025-11-27 00:08:41] 2025-11-27 05:08:04,532 | INFO     | sum of deviations: 4532061904752.388
[2025-11-27 00:08:41] 2025-11-27 05:08:04,533 | INFO     | mean x: 1764177069.8363373
[2025-11-27 00:08:41] 2025-11-27 05:08:04,533 | INFO     | mean y: 2954297.1867339583
[2025-11-27 00:08:41] 2025-11-27 05:08:04,533 | INFO     | intersect: -9662873436.880587
[2025-11-27 00:08:41] 2025-11-27 05:08:04,541 | INFO     | chi2: 0.2886426431467477
[2025-11-27 00:08:41] 2025-11-27 05:08:04,541 | INFO     | current memory leak: 5.48 B/s (using 1387 data points, chi2=0.29)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,542 | INFO     | could have reported an average CPU frequency of 3265 MHz (51 samples)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,542 | INFO     | ..............................
[2025-11-27 00:08:41] 2025-11-27 05:08:04,542 | INFO     | . Timing measurements:
[2025-11-27 00:08:41] 2025-11-27 05:08:04,542 | INFO     | . get job = 0 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,542 | INFO     | . initial setup = 2 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,543 | INFO     | . payload setup = 16 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,543 | INFO     | . stage-in = 0 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,543 | INFO     | . payload execution = 86495 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,543 | INFO     | . stage-out = 6 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,543 | INFO     | . log creation = 2 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,543 | INFO     | ..............................
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | 
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | job summary report
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | --------------------------------------------------
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | PanDA job id: 6891107118
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | task id: 47483661
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | errors: (none)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | pilot state: finished 
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | transexitcode: 0
[2025-11-27 00:08:41] 2025-11-27 05:08:04,613 | INFO     | exeerrorcode: 0
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | exeerrordiag: 
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | exitcode: 0
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | exitmsg: OK
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | cpuconsumptiontime: 199509 s
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | nevents: 1000
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | neventsw: 0
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | pid: 1580162
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | pgrp: 1580162
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | corecount: 8
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | event service: False
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | sizes: {0: 2284077, 1: 2284332, 12: 2284332, 16: 2284622, 22: 2284650, 86515: 2349698, 86521: 2358692, 86525: 2358748, 86546: 2358994}
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | --------------------------------------------------
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | 
[2025-11-27 00:08:41] 2025-11-27 05:08:04,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 00:08:41] 2025-11-27 05:08:04,654 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | job 6891107118 has completed (purged errors)
[2025-11-27 00:08:41] 2025-11-27 05:08:04,656 | INFO     | overall cleanup function is called
[2025-11-27 00:08:41] 2025-11-27 05:08:05,675 | INFO     | --- collectZombieJob: --- 10, [1580162]
[2025-11-27 00:08:41] 2025-11-27 05:08:05,676 | INFO     | zombie collector waiting for pid 1580162
[2025-11-27 00:08:41] 2025-11-27 05:08:05,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:08:41] 2025-11-27 05:08:05,676 | INFO     | collected zombie processes
[2025-11-27 00:08:41] 2025-11-27 05:08:05,676 | INFO     | will attempt to kill all subprocesses of pid=1580162
[2025-11-27 00:08:41] 2025-11-27 05:08:07,047 | INFO     | process IDs to be killed: [1580162] (in reverse order)
[2025-11-27 00:08:41] 2025-11-27 05:08:07,163 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:08:41] 2025-11-27 05:08:07,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:08:41] 2025-11-27 05:08:07,190 | INFO     | did not find any defunct processes belonging to 1580162
[2025-11-27 00:08:41] 2025-11-27 05:08:07,202 | INFO     | did not find any defunct processes belonging to 1580162
[2025-11-27 00:08:41] 2025-11-27 05:08:07,204 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:08:41] 2025-11-27 05:08:07,204 | INFO     | ready for new job
[2025-11-27 00:08:41] 2025-11-27 05:08:07,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:08:41] 2025-11-27 05:08:07,233 | INFO     | ***************************************
[2025-11-27 00:08:41] 2025-11-27 05:08:07,234 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:08:41] 2025-11-27 05:08:07,234 | INFO     | ***************************************
[2025-11-27 00:08:41] 2025-11-27 05:08:07,234 | INFO     | 
[2025-11-27 00:08:41] 2025-11-27 05:08:07,271 | INFO     | architecture information:
[2025-11-27 00:08:41] 2025-11-27 05:08:07,271 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:08:41] 2025-11-27 05:08:07,311 | INFO     | cat /etc/os-release:
[2025-11-27 00:08:41] NAME="CentOS Linux"
[2025-11-27 00:08:41] VERSION="7 (Core)"
[2025-11-27 00:08:41] ID="centos"
[2025-11-27 00:08:41] ID_LIKE="rhel fedora"
[2025-11-27 00:08:41] VERSION_ID="7"
[2025-11-27 00:08:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:08:41] ANSI_COLOR="0;31"
[2025-11-27 00:08:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:08:41] HOME_URL="https://www.centos.org/"
[2025-11-27 00:08:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:08:41] 
[2025-11-27 00:08:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:08:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:08:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:08:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:08:41] 
[2025-11-27 00:08:41] 2025-11-27 05:08:07,311 | INFO     | ***************************************
[2025-11-27 00:08:41] 2025-11-27 05:08:07,831 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 00:08:41] 2025-11-27 05:08:07,864 | INFO     | sufficient remaining disk space (81202774016 B)
[2025-11-27 00:08:41] 2025-11-27 05:08:07,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:08:41] 2025-11-27 05:08:07,864 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:08:41] 2025-11-27 05:08:07,864 | INFO     | update_server=False
[2025-11-27 00:08:41] 2025-11-27 05:08:07,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:08:41] 2025-11-27 05:08:07,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:08:41] 2025-11-27 05:08:08,229 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 00:08:41] 2025-11-27 05:08:08,230 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 00:08:41] 2025-11-27 05:08:08,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:08:41] 2025-11-27 05:08:08,230 | INFO     | will abort loop
[2025-11-27 00:08:41] 2025-11-27 05:08:08,409 | INFO     | all data control threads have been joined
[2025-11-27 00:08:41] 2025-11-27 05:08:08,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:08:41] 2025-11-27 05:08:08,802 | INFO     | all job control threads have been joined
[2025-11-27 00:08:41] 2025-11-27 05:08:08,871 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,000 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,118 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,177 | INFO     | [job] validate thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,225 | INFO     | all payload control threads have been joined
[2025-11-27 00:08:41] 2025-11-27 05:08:09,236 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,416 | INFO     | [data] control thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:08:41] 2025-11-27 05:08:09,738 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,743 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,754 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,784 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:09,809 | INFO     | [job] control thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:10,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:10,232 | INFO     | [payload] control thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:10,592 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:10,651 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:12,002 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:08:41] 2025-11-27 05:08:33,773 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:08:41] 2025-11-27 05:08:34,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771981645632)>', '<ExcThread(monitor, started 139770961315584)>']
[2025-11-27 00:08:41] 2025-11-27 05:08:36,682 | INFO     | PID=1564629 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:08:41] 2025-11-27 05:08:36,682 | INFO     | .. there are 17 such processes running
[2025-11-27 00:08:41] 2025-11-27 05:08:36,683 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:08:41] 2025-11-27 05:08:36,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:08:41] 2025-11-27 05:08:36,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:08:41] 2025-11-27 05:08:36,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:08:41] 2025-11-27 05:08:36,683 | INFO     | [monitor] control thread has ended
[2025-11-27 00:08:41] 2025-11-27 05:08:39,391 | INFO     | all workflow threads have been joined
[2025-11-27 00:08:41] 2025-11-27 05:08:39,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:08:41] 2025-11-27 05:08:39,392 | INFO     | traces error code: 0
[2025-11-27 00:08:41] 2025-11-27 05:08:39,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:08:41] 2025-11-27 05:08:40,301 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:08:41] 2025-11-27 05:08:40,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:08:41] 2025-11-27 05:08:40,308 [wrapper] pilotpid: 1564629
[2025-11-27 00:08:41] 2025-11-27 05:08:40,312 [wrapper] Pilot exit status: 0
[2025-11-27 00:08:41] 2025-11-27 05:08:40,336 [wrapper] pandaids: 6891107118
[2025-11-27 00:08:41] 2025-11-27 05:08:40,448 [wrapper] cleanup supervisor_pilot 1322181 1564630
[2025-11-27 00:08:41] 2025-11-27 05:08:40,472 [wrapper] Test setup, not cleaning
[2025-11-27 00:08:41] 2025-11-27 05:08:40,477 [wrapper] apfmon messages muted
[2025-11-27 00:08:41] 2025-11-27 05:08:40,492 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:08:41] 2025-11-27 05:08:40,537 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:08:41]  *** Error codes and diagnostics ***
[2025-11-27 00:08:41]     "exeErrorCode": 0,
[2025-11-27 00:08:41]     "exeErrorDiag": "",
[2025-11-27 00:08:41]     "pilotErrorCode": 0,
[2025-11-27 00:08:41]     "pilotErrorDiag": "",
[2025-11-27 00:08:41]  *** Listing of results directory ***
[2025-11-27 00:08:41] total 1329192
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 02:02 pilot3.tar.gz
[2025-11-27 00:08:41] -rwx------. 1 boincer umatlas     36292 Nov 18 02:02 runpilot2-wrapper.sh
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:03 queuedata.json
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:08:41] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 00:08:41] -rw-r--r--. 2 boincer umatlas 409587652 Nov 26 00:04 EVNT.47483658._000293.pool.root.1
[2025-11-27 00:08:41] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 00:08:41] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 00:08:41] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:04 input.tar.gz
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:04 pandaJob.out
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 00:08:41] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas       532 Nov 26 23:57 boinc_task_state.xml
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas      6903 Nov 27 00:03 init_data.xml
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas 919701426 Nov 27 00:06 HITS.47483661._002623.pool.root.1
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas      1051 Nov 27 00:07 memory_monitor_summary.json
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas   1516240 Nov 27 00:07 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas   2470372 Nov 27 00:07 log.47483661._002623.job.log.tgz.1
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas      8593 Nov 27 00:08 heartbeat.json
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas        95 Nov 27 00:08 pilot_heartbeat.json
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas      5010 Nov 27 00:08 pilotlog.txt
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas        28 Nov 27 00:08 wrapper_checkpoint.txt
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 00:08 boinc_mmap_file
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas  11472597 Nov 27 00:08 log.47483661._002623.job.log.1
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas       353 Nov 27 00:08 output.list
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas       620 Nov 27 00:08 runtime_log
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas  13967360 Nov 27 00:08 result.tar.gz
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 00:08 runtime_log.err
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas       661 Nov 27 00:08 6rZMDmbuUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0TKODmr9yAqm.diag
[2025-11-27 00:08:41] -rw-r--r--. 1 boincer umatlas     21275 Nov 27 00:08 stderr.txt
[2025-11-27 00:08:41] HITS file was successfully produced:
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas 919701426 Nov 27 00:06 shared/HITS.pool.root.1
[2025-11-27 00:08:41]  *** Contents of shared directory: ***
[2025-11-27 00:08:41] total 1312376
[2025-11-27 00:08:41] -rw-r--r--. 2 boincer umatlas 409587652 Nov 26 00:04 ATLAS.root_0
[2025-11-27 00:08:41] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 00:08:41] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:04 input.tar.gz
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas 919701426 Nov 27 00:06 HITS.pool.root.1
[2025-11-27 00:08:41] -rw-------. 1 boincer umatlas  13967360 Nov 27 00:08 result.tar.gz
00:08:42 (1557227): run_atlas exited; CPU time 199572.757271
00:08:42 (1557227): called boinc_finish(0)

</stderr_txt>
]]>

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