Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:34 (2092249): wrapper (7.7.26015): starting
00:03:34 (2092249): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:03:34] Arguments: --nthreads 9
[2025-11-26 00:03:34] Threads: 9
[2025-11-26 00:03:34] Checking for CVMFS
[2025-11-26 00:03:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:34] 2.13.3.0 15397 29466 220972 153309 2 254 16928121 32935936 42762 16776704 0 298804327 99.624 285169225 36406 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:03:34] CVMFS is ok
[2025-11-26 00:03:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:34] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:34] Checking for apptainer binary...
[2025-11-26 00:03:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:34] Running /usr/bin/apptainer --version
[2025-11-26 00:03:34] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:34] c7-16-8.aglt2.org
[2025-11-26 00:03:34] apptainer works
[2025-11-26 00:03:35] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:03:35] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:03:35] Starting ATLAS job with PandaID=6891106938
[2025-11-26 00:03:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:36:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:36:30] 2025-11-26 21:09:32,600 | INFO     | monitor loop #2958: job 0:6891106938 is in state 'finished'
[2025-11-26 16:36:30] 2025-11-26 21:09:32,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:36:30] 2025-11-26 21:09:32,706 | INFO     | time since job start (57926s) is within the limit (172800.0s)
[2025-11-26 16:36:30] 2025-11-26 21:09:33,552 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 16:36:30] 2025-11-26 21:09:33,557 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3163.9333229166673
[2025-11-26 16:36:30] 2025-11-26 21:09:33,584 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891106938/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:36:30] 2025-11-26 21:09:33,585 | INFO     | extracted standard info from prmon json
[2025-11-26 16:36:30] 2025-11-26 21:09:33,585 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:36:30] 2025-11-26 21:09:33,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:36:30] 2025-11-26 21:09:33,649 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:36:30] 2025-11-26 21:09:33,655 | INFO     | sum of square deviations: 265001353643.63992
[2025-11-26 16:36:30] 2025-11-26 21:09:33,979 | INFO     | sum of deviations: 2088932844111.246
[2025-11-26 16:36:30] 2025-11-26 21:09:33,980 | INFO     | mean x: 1764162427.6006322
[2025-11-26 16:36:30] 2025-11-26 21:09:33,980 | INFO     | mean y: 3215992.91886196
[2025-11-26 16:36:30] 2025-11-26 21:09:33,981 | INFO     | intersect: -13903191603.46526
[2025-11-26 16:36:30] 2025-11-26 21:09:33,982 | INFO     | chi2: 7.552761497734478
[2025-11-26 16:36:30] 2025-11-26 21:09:33,983 | INFO     | sum of square deviations: 260834929495.7615
[2025-11-26 16:36:30] 2025-11-26 21:09:34,011 | INFO     | sum of deviations: 2475075784883.64
[2025-11-26 16:36:30] 2025-11-26 21:09:34,011 | INFO     | mean x: 1764162275.10911
[2025-11-26 16:36:30] 2025-11-26 21:09:34,012 | INFO     | mean y: 3230125.751059322
[2025-11-26 16:36:30] 2025-11-26 21:09:34,012 | INFO     | intersect: -16736994567.96176
[2025-11-26 16:36:30] 2025-11-26 21:09:34,013 | INFO     | chi2: 3.890350263722458
[2025-11-26 16:36:30] 2025-11-26 21:09:34,013 | INFO     | current chi2=3.890350263722458 (change=48.49102192768294 %)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,014 | INFO     | sum of square deviations: 256712413147.7468
[2025-11-26 16:36:30] 2025-11-26 21:09:34,038 | INFO     | sum of deviations: 2626086551638.327
[2025-11-26 16:36:30] 2025-11-26 21:09:34,038 | INFO     | mean x: 1764162122.6176784
[2025-11-26 16:36:30] 2025-11-26 21:09:34,038 | INFO     | mean y: 3235707.883919063
[2025-11-26 16:36:30] 2025-11-26 21:09:34,039 | INFO     | intersect: -18043583175.196938
[2025-11-26 16:36:30] 2025-11-26 21:09:34,040 | INFO     | chi2: 3.1457374613926867
[2025-11-26 16:36:30] 2025-11-26 21:09:34,040 | INFO     | current chi2=3.1457374613926867 (change=19.139993878527868 %)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,040 | INFO     | right removable region: 938
[2025-11-26 16:36:30] 2025-11-26 21:09:34,041 | INFO     | sum of square deviations: 260834060552.97916
[2025-11-26 16:36:30] 2025-11-26 21:09:34,059 | INFO     | sum of deviations: 1772285014780.6763
[2025-11-26 16:36:30] 2025-11-26 21:09:34,060 | INFO     | mean x: 1764162580.1080508
[2025-11-26 16:36:30] 2025-11-26 21:09:34,060 | INFO     | mean y: 3227569.5423728814
[2025-11-26 16:36:30] 2025-11-26 21:09:34,060 | INFO     | intersect: -11983699665.85699
[2025-11-26 16:36:30] 2025-11-26 21:09:34,061 | INFO     | chi2: 5.082469159748179
[2025-11-26 16:36:30] 2025-11-26 21:09:34,061 | INFO     | current chi2=5.082469159748179 (change=32.707140808395536 %)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,062 | INFO     | sum of square deviations: 256710905851.1204
[2025-11-26 16:36:30] 2025-11-26 21:09:34,085 | INFO     | sum of deviations: 1645963421162.6072
[2025-11-26 16:36:30] 2025-11-26 21:09:34,085 | INFO     | mean x: 1764162732.6112885
[2025-11-26 16:36:30] 2025-11-26 21:09:34,085 | INFO     | mean y: 3232241.357827476
[2025-11-26 16:36:30] 2025-11-26 21:09:34,085 | INFO     | intersect: -11308119402.348654
[2025-11-26 16:36:30] 2025-11-26 21:09:34,086 | INFO     | chi2: 4.844726853810794
[2025-11-26 16:36:30] 2025-11-26 21:09:34,086 | INFO     | current chi2=4.844726853810794 (change=4.677693035901552 %)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,086 | INFO     | left removable region: 20
[2025-11-26 16:36:30] 2025-11-26 21:09:34,087 | INFO     | sum of square deviations: 239869274690.70627
[2025-11-26 16:36:30] 2025-11-26 21:09:34,106 | INFO     | sum of deviations: 1995891198718.8232
[2025-11-26 16:36:30] 2025-11-26 21:09:34,106 | INFO     | mean x: 1764162702.137255
[2025-11-26 16:36:30] 2025-11-26 21:09:34,106 | INFO     | mean y: 3260465.8267973857
[2025-11-26 16:36:30] 2025-11-26 21:09:34,106 | INFO     | intersect: -14675888478.296759
[2025-11-26 16:36:30] 2025-11-26 21:09:34,107 | INFO     | chi2: 0.1272032326208034
[2025-11-26 16:36:30] 2025-11-26 21:09:34,151 | INFO     | current memory leak: 8.32 B/s (using 918 data points, chi2=0.13)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,153 | INFO     | could have reported an average CPU frequency of 3197 MHz (35 samples)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,153 | INFO     | ..............................
[2025-11-26 16:36:30] 2025-11-26 21:09:34,153 | INFO     | . Timing measurements:
[2025-11-26 16:36:30] 2025-11-26 21:09:34,153 | INFO     | . get job = 0 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,153 | INFO     | . initial setup = 3 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,154 | INFO     | . payload setup = 20 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,154 | INFO     | . stage-in = 0 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,154 | INFO     | . payload execution = 57844 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,154 | INFO     | . stage-out = 10 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,154 | INFO     | . log creation = 1 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,154 | INFO     | ..............................
[2025-11-26 16:36:30] 2025-11-26 21:09:34,409 | INFO     | 
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | job summary report
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | --------------------------------------------------
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | PanDA job id: 6891106938
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | task id: 47483661
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | errors: (none)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | pilot state: finished 
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | transexitcode: 0
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | exeerrorcode: 0
[2025-11-26 16:36:30] 2025-11-26 21:09:34,410 | INFO     | exeerrordiag: 
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | exitcode: 0
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | exitmsg: OK
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | cpuconsumptiontime: 196455 s
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | nevents: 1000
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | neventsw: 0
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | pid: 2140203
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | pgrp: 2140203
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | corecount: 9
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | event service: False
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | sizes: {0: 2284077, 1: 2284332, 2: 2284332, 12: 2284360, 15: 2284650, 23: 2284678, 57867: 2336307, 57868: 2336334, 57879: 2345384, 57882: 2345440, 57892: 2345686}
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | --------------------------------------------------
[2025-11-26 16:36:30] 2025-11-26 21:09:34,411 | INFO     | 
[2025-11-26 16:36:30] 2025-11-26 21:09:34,412 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-26 16:36:30] 2025-11-26 21:09:34,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,540 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:36:30] 2025-11-26 21:09:34,540 | INFO     | job 6891106938 has completed (purged errors)
[2025-11-26 16:36:30] 2025-11-26 21:09:34,540 | INFO     | overall cleanup function is called
[2025-11-26 16:36:30] 2025-11-26 21:09:35,627 | INFO     | --- collectZombieJob: --- 10, [2140203]
[2025-11-26 16:36:30] 2025-11-26 21:09:35,627 | INFO     | zombie collector waiting for pid 2140203
[2025-11-26 16:36:30] 2025-11-26 21:09:35,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:36:30] 2025-11-26 21:09:35,628 | INFO     | collected zombie processes
[2025-11-26 16:36:30] 2025-11-26 21:09:35,628 | INFO     | will attempt to kill all subprocesses of pid=2140203
[2025-11-26 16:36:30] 2025-11-26 21:09:36,872 | INFO     | process IDs to be killed: [2140203] (in reverse order)
[2025-11-26 16:36:30] 2025-11-26 21:09:37,130 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:36:30] 2025-11-26 21:09:37,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:36:30] 2025-11-26 21:09:37,161 | INFO     | did not find any defunct processes belonging to 2140203
[2025-11-26 16:36:30] 2025-11-26 21:09:37,190 | INFO     | did not find any defunct processes belonging to 2140203
[2025-11-26 16:36:30] 2025-11-26 21:09:37,191 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:36:30] 2025-11-26 21:09:37,192 | INFO     | ready for new job
[2025-11-26 16:36:30] 2025-11-26 21:09:37,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:36:30] 2025-11-26 21:09:37,196 | INFO     | ***************************************
[2025-11-26 16:36:30] 2025-11-26 21:09:37,221 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:36:30] 2025-11-26 21:09:37,221 | INFO     | ***************************************
[2025-11-26 16:36:30] 2025-11-26 21:09:37,221 | INFO     | 
[2025-11-26 16:36:30] 2025-11-26 21:09:37,235 | INFO     | architecture information:
[2025-11-26 16:36:30] 2025-11-26 21:09:37,242 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:36:30] 2025-11-26 21:09:37,311 | INFO     | cat /etc/os-release:
[2025-11-26 16:36:30] NAME="CentOS Linux"
[2025-11-26 16:36:30] VERSION="7 (Core)"
[2025-11-26 16:36:30] ID="centos"
[2025-11-26 16:36:30] ID_LIKE="rhel fedora"
[2025-11-26 16:36:30] VERSION_ID="7"
[2025-11-26 16:36:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:36:30] ANSI_COLOR="0;31"
[2025-11-26 16:36:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:36:30] HOME_URL="https://www.centos.org/"
[2025-11-26 16:36:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:36:30] 
[2025-11-26 16:36:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:36:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:36:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:36:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:36:30] 
[2025-11-26 16:36:30] 2025-11-26 21:09:37,311 | INFO     | ***************************************
[2025-11-26 16:36:30] 2025-11-26 21:09:37,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-26 16:36:30] 2025-11-26 21:09:37,871 | INFO     | sufficient remaining disk space (60175679488 B)
[2025-11-26 16:36:30] 2025-11-26 21:09:37,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:36:30] 2025-11-26 21:09:37,872 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:36:30] 2025-11-26 21:09:37,872 | INFO     | update_server=False
[2025-11-26 16:36:30] 2025-11-26 21:09:37,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:36:30] 2025-11-26 21:09:37,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:36:30] 2025-11-26 21:09:38,452 | INFO     | all payload control threads have been joined
[2025-11-26 16:36:30] 2025-11-26 21:09:38,474 | INFO     | all data control threads have been joined
[2025-11-26 16:36:30] 2025-11-26 21:09:38,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:36:30] 2025-11-26 21:09:38,691 | INFO     | aborting loop
[2025-11-26 16:36:30] 2025-11-26 21:09:38,861 | INFO     | all job control threads have been joined
[2025-11-26 16:36:30] 2025-11-26 21:09:38,893 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:36:30] 2025-11-26 21:09:39,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:36:30] 2025-11-26 21:09:39,460 | INFO     | [payload] control thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,483 | INFO     | [data] control thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,698 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,818 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,850 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,856 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,862 | INFO     | [job] validate thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,930 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,929 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:39,929 | INFO     | [job] control thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:40,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:40,098 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:40,257 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:40,451 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:43,049 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:36:30] 2025-11-26 21:09:51,469 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:36:30] 2025-11-26 21:09:52,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280076474176)>', '<ExcThread(monitor, started 140279596181248)>']
[2025-11-26 16:36:30] 2025-11-26 21:09:57,252 | INFO     | all workflow threads have been joined
[2025-11-26 16:36:30] 2025-11-26 21:09:57,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:36:30] 2025-11-26 21:09:57,276 | INFO     | traces error code: 0
[2025-11-26 16:36:30] 2025-11-26 21:09:57,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:36:30] 2025-11-26 21:10:06,855 | INFO     | PID=2107350 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:36:30] 2025-11-26 21:10:06,855 | INFO     | .. there are 71 such processes running
[2025-11-26 16:36:30] 2025-11-26 21:10:06,855 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:36:30] 2025-11-26 21:10:06,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:36:30] 2025-11-26 21:10:06,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:36:30] 2025-11-26 21:10:06,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:36:30] 2025-11-26 21:10:06,856 | INFO     | [monitor] control thread has ended
[2025-11-26 16:36:30] 2025-11-26 21:10:08,408 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:36:30] 2025-11-26 21:10:08,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:36:30] 2025-11-26 21:10:08,428 [wrapper] pilotpid: 2107350
[2025-11-26 16:36:30] 2025-11-26 21:10:08,433 [wrapper] Pilot exit status: 0
[2025-11-26 16:36:30] 2025-11-26 21:10:08,456 [wrapper] pandaids: 6891106938
[2025-11-26 16:36:30] 2025-11-26 21:10:08,630 [wrapper] cleanup supervisor_pilot 1079845 2107351
[2025-11-26 16:36:30] 2025-11-26 21:10:08,632 [wrapper] Test setup, not cleaning
[2025-11-26 16:36:30] 2025-11-26 21:10:08,634 [wrapper] apfmon messages muted
[2025-11-26 16:36:30] 2025-11-26 21:10:08,636 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:36:30] 2025-11-26 21:10:08,639 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:36:30]  *** Error codes and diagnostics ***
[2025-11-26 16:36:30]     "exeErrorCode": 0,
[2025-11-26 16:36:30]     "exeErrorDiag": "",
[2025-11-26 16:36:30]     "pilotErrorCode": 0,
[2025-11-26 16:36:30]     "pilotErrorDiag": "",
[2025-11-26 16:36:30]  *** Listing of results directory ***
[2025-11-26 16:36:30] total 1317936
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 02:00 queuedata.json
[2025-11-26 16:36:30] -rwx------. 1 boincer umatlas     36292 Nov 18 02:01 runpilot2-wrapper.sh
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:36:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-26 16:36:30] -rw-r--r--. 2 boincer umatlas 410001629 Nov 26 00:03 EVNT.47483658._000284.pool.root.1
[2025-11-26 16:36:30] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:03 start_atlas.sh
[2025-11-26 16:36:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-26 16:36:30] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:03 input.tar.gz
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:03 pandaJob.out
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-26 16:36:30] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas       530 Nov 26 15:54 boinc_task_state.xml
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas 917966919 Nov 26 16:08 HITS.47483661._002533.pool.root.1
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas      1071 Nov 26 16:09 memory_monitor_summary.json
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:09 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas   2159761 Nov 26 16:09 log.47483661._002533.job.log.tgz.1
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas        95 Nov 26 16:09 pilot_heartbeat.json
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas      8628 Nov 26 16:09 heartbeat.json
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas       823 Nov 26 16:10 pilotlog.txt
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas   6689485 Nov 26 16:10 log.47483661._002533.job.log.1
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas       353 Nov 26 16:10 output.list
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas       620 Nov 26 16:10 runtime_log
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas   8867840 Nov 26 16:10 result.tar.gz
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas       664 Nov 26 16:10 x8XNDmmtUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvSKODmOAxjGm.diag
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas      8699 Nov 26 16:10 runtime_log.err
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 16:29 init_data.xml
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 16:36 boinc_mmap_file
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas      2143 Nov 26 16:36 stderr.txt
[2025-11-26 16:36:30] -rw-r--r--. 1 boincer umatlas        28 Nov 26 16:36 wrapper_checkpoint.txt
[2025-11-26 16:36:30] HITS file was successfully produced:
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas 917966919 Nov 26 16:08 shared/HITS.pool.root.1
[2025-11-26 16:36:30]  *** Contents of shared directory: ***
[2025-11-26 16:36:30] total 1306116
[2025-11-26 16:36:30] -rw-r--r--. 2 boincer umatlas 410001629 Nov 26 00:03 ATLAS.root_0
[2025-11-26 16:36:30] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:03 start_atlas.sh
[2025-11-26 16:36:30] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:03 input.tar.gz
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas 917966919 Nov 26 16:08 HITS.pool.root.1
[2025-11-26 16:36:30] -rw-------. 1 boincer umatlas   8867840 Nov 26 16:10 result.tar.gz
16:36:32 (2092249): run_atlas exited; CPU time 198272.283230
16:36:32 (2092249): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN