Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:51 (1908595): wrapper (7.7.26015): starting
00:03:51 (1908595): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:03:51] Arguments: --nthreads 9
[2025-11-26 00:03:51] Threads: 9
[2025-11-26 00:03:51] Checking for CVMFS
[2025-11-26 00:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:53] 2.13.2.0 6751 33901 258036 153309 2 582 33837283 40960001 23316 16776704 0 101018074 99.582 104744090 36684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:03:53] CVMFS is ok
[2025-11-26 00:03:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:54] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:54] Checking for apptainer binary...
[2025-11-26 00:03:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:54] Running /usr/bin/apptainer --version
[2025-11-26 00:03:54] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:54] c-212-7.aglt2.org
[2025-11-26 00:03:54] apptainer works
[2025-11-26 00:03:54] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:03:54] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:03:55] Starting ATLAS job with PandaID=6891107006
[2025-11-26 00:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:59:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:59:12] 2025-11-27 09:58:05,834 | INFO     | monitor loop #6175: job 0:6891107006 is in state 'finished'
[2025-11-27 04:59:12] 2025-11-27 09:58:05,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,365 | INFO     | time since job start (103990s) is within the limit (172800.0s)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,520 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 04:59:12] 2025-11-27 09:58:07,549 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2904.3570000000004
[2025-11-27 04:59:12] 2025-11-27 09:58:07,583 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891107006/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,583 | INFO     | extracted standard info from prmon json
[2025-11-27 04:59:12] 2025-11-27 09:58:07,584 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:59:12] 2025-11-27 09:58:07,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:59:12] 2025-11-27 09:58:07,606 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:59:12] 2025-11-27 09:58:07,608 | INFO     | sum of square deviations: 1531515940264.4905
[2025-11-27 04:59:12] 2025-11-27 09:58:07,667 | INFO     | sum of deviations: 8007471691866.516
[2025-11-27 04:59:12] 2025-11-27 09:58:07,668 | INFO     | mean x: 1764185528.082208
[2025-11-27 04:59:12] 2025-11-27 09:58:07,668 | INFO     | mean y: 3046681.746330006
[2025-11-27 04:59:12] 2025-11-27 09:58:07,668 | INFO     | intersect: -9220928925.637297
[2025-11-27 04:59:12] 2025-11-27 09:58:07,670 | INFO     | chi2: 9.770559466232209
[2025-11-27 04:59:12] 2025-11-27 09:58:07,672 | INFO     | sum of square deviations: 1518066473446.1177
[2025-11-27 04:59:12] 2025-11-27 09:58:07,729 | INFO     | sum of deviations: 8656547509855.839
[2025-11-27 04:59:12] 2025-11-27 09:58:07,729 | INFO     | mean x: 1764185375.5853946
[2025-11-27 04:59:12] 2025-11-27 09:58:07,729 | INFO     | mean y: 3054041.5253239106
[2025-11-27 04:59:12] 2025-11-27 09:58:07,729 | INFO     | intersect: -10056949777.200663
[2025-11-27 04:59:12] 2025-11-27 09:58:07,731 | INFO     | chi2: 6.24865612342064
[2025-11-27 04:59:12] 2025-11-27 09:58:07,731 | INFO     | current chi2=6.24865612342064 (change=36.04607653209146 %)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,732 | INFO     | sum of square deviations: 1504695674488.238
[2025-11-27 04:59:12] 2025-11-27 09:58:07,788 | INFO     | sum of deviations: 8797644894351.512
[2025-11-27 04:59:12] 2025-11-27 09:58:07,789 | INFO     | mean x: 1764185223.0868282
[2025-11-27 04:59:12] 2025-11-27 09:58:07,789 | INFO     | mean y: 3055648.74483166
[2025-11-27 04:59:12] 2025-11-27 09:58:07,789 | INFO     | intersect: -10311771052.580639
[2025-11-27 04:59:12] 2025-11-27 09:58:07,790 | INFO     | chi2: 5.861672992548853
[2025-11-27 04:59:12] 2025-11-27 09:58:07,791 | INFO     | current chi2=5.861672992548853 (change=6.193061727646242 %)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,791 | INFO     | right removable region: 1692
[2025-11-27 04:59:12] 2025-11-27 09:58:07,792 | INFO     | sum of square deviations: 1518065349216.1172
[2025-11-27 04:59:12] 2025-11-27 09:58:07,848 | INFO     | sum of deviations: 7274129195129.811
[2025-11-27 04:59:12] 2025-11-27 09:58:07,848 | INFO     | mean x: 1764185680.5853946
[2025-11-27 04:59:12] 2025-11-27 09:58:07,848 | INFO     | mean y: 3054995.742638398
[2025-11-27 04:59:12] 2025-11-27 09:58:07,848 | INFO     | intersect: -8450411497.9117365
[2025-11-27 04:59:12] 2025-11-27 09:58:07,850 | INFO     | chi2: 5.484545121210138
[2025-11-27 04:59:12] 2025-11-27 09:58:07,850 | INFO     | current chi2=5.484545121210138 (change=43.86662155667606 %)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,851 | INFO     | sum of square deviations: 1504693943185.061
[2025-11-27 04:59:12] 2025-11-27 09:58:07,908 | INFO     | sum of deviations: 6895981161562.265
[2025-11-27 04:59:12] 2025-11-27 09:58:07,908 | INFO     | mean x: 1764185833.0874188
[2025-11-27 04:59:12] 2025-11-27 09:58:07,908 | INFO     | mean y: 3059305.491435322
[2025-11-27 04:59:12] 2025-11-27 09:58:07,909 | INFO     | intersect: -8082167810.339129
[2025-11-27 04:59:12] 2025-11-27 09:58:07,910 | INFO     | chi2: 4.294441423330188
[2025-11-27 04:59:12] 2025-11-27 09:58:07,910 | INFO     | current chi2=4.294441423330188 (change=21.69922339188194 %)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,910 | INFO     | left removable region: 20
[2025-11-27 04:59:12] 2025-11-27 09:58:07,912 | INFO     | sum of square deviations: 1449393657937.9988
[2025-11-27 04:59:12] 2025-11-27 09:58:07,965 | INFO     | sum of deviations: 7407096968651.697
[2025-11-27 04:59:12] 2025-11-27 09:58:07,965 | INFO     | mean x: 1764185802.5915072
[2025-11-27 04:59:12] 2025-11-27 09:58:07,965 | INFO     | mean y: 3071595.6686602873
[2025-11-27 04:59:12] 2025-11-27 09:58:07,965 | INFO     | intersect: -9012764260.20543
[2025-11-27 04:59:12] 2025-11-27 09:58:07,967 | INFO     | chi2: 0.22410947185562718
[2025-11-27 04:59:12] 2025-11-27 09:58:07,967 | INFO     | current memory leak: 5.11 B/s (using 1672 data points, chi2=0.22)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,968 | INFO     | could have reported an average CPU frequency of 3008 MHz (60 samples)
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | ..............................
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . Timing measurements:
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . get job = 0 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . initial setup = 7 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . payload setup = 33 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . stage-in = 0 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . payload execution = 103872 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . stage-out = 5 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | . log creation = 1 s
[2025-11-27 04:59:12] 2025-11-27 09:58:07,969 | INFO     | ..............................
[2025-11-27 04:59:12] 2025-11-27 09:58:08,050 | INFO     | 
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | job summary report
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | --------------------------------------------------
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | PanDA job id: 6891107006
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | task id: 47483661
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | errors: (none)
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | pilot state: finished 
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | transexitcode: 0
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | exeerrorcode: 0
[2025-11-27 04:59:12] 2025-11-27 09:58:08,052 | INFO     | exeerrordiag: 
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | exitcode: 0
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | exitmsg: OK
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | cpuconsumptiontime: 219534 s
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | nevents: 1000
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | neventsw: 0
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | pid: 1944546
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | pgrp: 1944546
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | corecount: 9
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | event service: False
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 23: 2284360, 29: 2284650, 33: 2284678, 103907: 2358466, 103913: 2367460, 103917: 2367516, 103931: 2367762}
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | --------------------------------------------------
[2025-11-27 04:59:12] 2025-11-27 09:58:08,053 | INFO     | 
[2025-11-27 04:59:12] 2025-11-27 09:58:08,054 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 04:59:12] 2025-11-27 09:58:08,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:59:12] 2025-11-27 09:58:08,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:59:12] 2025-11-27 09:58:08,154 | INFO     | job 6891107006 has completed (purged errors)
[2025-11-27 04:59:12] 2025-11-27 09:58:08,155 | INFO     | overall cleanup function is called
[2025-11-27 04:59:12] 2025-11-27 09:58:09,245 | INFO     | --- collectZombieJob: --- 10, [1944546]
[2025-11-27 04:59:12] 2025-11-27 09:58:09,245 | INFO     | zombie collector waiting for pid 1944546
[2025-11-27 04:59:12] 2025-11-27 09:58:09,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:59:12] 2025-11-27 09:58:09,245 | INFO     | collected zombie processes
[2025-11-27 04:59:12] 2025-11-27 09:58:09,245 | INFO     | will attempt to kill all subprocesses of pid=1944546
[2025-11-27 04:59:12] 2025-11-27 09:58:10,210 | INFO     | process IDs to be killed: [1944546] (in reverse order)
[2025-11-27 04:59:12] 2025-11-27 09:58:10,418 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:59:12] 2025-11-27 09:58:10,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:59:12] 2025-11-27 09:58:10,499 | INFO     | did not find any defunct processes belonging to 1944546
[2025-11-27 04:59:12] 2025-11-27 09:58:10,623 | INFO     | did not find any defunct processes belonging to 1944546
[2025-11-27 04:59:12] 2025-11-27 09:58:10,652 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:59:12] 2025-11-27 09:58:10,652 | INFO     | ready for new job
[2025-11-27 04:59:12] 2025-11-27 09:58:10,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:59:12] 2025-11-27 09:58:10,668 | INFO     | ***************************************
[2025-11-27 04:59:12] 2025-11-27 09:58:10,679 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:59:12] 2025-11-27 09:58:10,679 | INFO     | ***************************************
[2025-11-27 04:59:12] 2025-11-27 09:58:10,679 | INFO     | 
[2025-11-27 04:59:12] 2025-11-27 09:58:10,696 | INFO     | architecture information:
[2025-11-27 04:59:12] 2025-11-27 09:58:10,696 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:59:12] 2025-11-27 09:58:10,733 | INFO     | cat /etc/os-release:
[2025-11-27 04:59:12] NAME="CentOS Linux"
[2025-11-27 04:59:12] VERSION="7 (Core)"
[2025-11-27 04:59:12] ID="centos"
[2025-11-27 04:59:12] ID_LIKE="rhel fedora"
[2025-11-27 04:59:12] VERSION_ID="7"
[2025-11-27 04:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:59:12] ANSI_COLOR="0;31"
[2025-11-27 04:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:59:12] HOME_URL="https://www.centos.org/"
[2025-11-27 04:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:59:12] 
[2025-11-27 04:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:59:12] 
[2025-11-27 04:59:12] 2025-11-27 09:58:10,733 | INFO     | ***************************************
[2025-11-27 04:59:12] 2025-11-27 09:58:11,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 04:59:12] 2025-11-27 09:58:11,273 | INFO     | sufficient remaining disk space (121686196224 B)
[2025-11-27 04:59:12] 2025-11-27 09:58:11,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:59:12] 2025-11-27 09:58:11,274 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:59:12] 2025-11-27 09:58:11,274 | INFO     | update_server=False
[2025-11-27 04:59:12] 2025-11-27 09:58:11,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:59:12] 2025-11-27 09:58:11,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:59:12] 2025-11-27 09:58:11,598 | INFO     | all payload control threads have been joined
[2025-11-27 04:59:12] 2025-11-27 09:58:11,819 | INFO     | all data control threads have been joined
[2025-11-27 04:59:12] 2025-11-27 09:58:11,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:59:12] 2025-11-27 09:58:11,881 | INFO     | aborting loop
[2025-11-27 04:59:12] 2025-11-27 09:58:12,283 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,365 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,376 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,415 | INFO     | all job control threads have been joined
[2025-11-27 04:59:12] 2025-11-27 09:58:12,501 | INFO     | [job] validate thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,603 | INFO     | [payload] control thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,821 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,824 | INFO     | [data] control thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,871 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,887 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:12,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:13,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:59:12] 2025-11-27 09:58:13,102 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:13,185 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:13,284 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:13,421 | INFO     | [job] control thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:13,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:59:12] 2025-11-27 09:58:14,095 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:17,494 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:59:12] 2025-11-27 09:58:41,186 | INFO     | PID=1917643 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:59:12] 2025-11-27 09:58:41,186 | INFO     | .. there are 26 such processes running
[2025-11-27 04:59:12] 2025-11-27 09:58:41,190 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:59:12] 2025-11-27 09:58:41,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:59:12] 2025-11-27 09:58:41,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:59:12] 2025-11-27 09:59:05,441 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:59:12] 2025-11-27 09:59:05,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140406746552128)>', '<ExcThread(monitor, started 140406012495616)>']
[2025-11-27 04:59:12] 2025-11-27 09:59:06,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:59:12] 2025-11-27 09:59:06,357 | INFO     | [monitor] control thread has ended
[2025-11-27 04:59:12] 2025-11-27 09:59:10,504 | INFO     | all workflow threads have been joined
[2025-11-27 04:59:12] 2025-11-27 09:59:10,504 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:59:12] 2025-11-27 09:59:10,504 | INFO     | traces error code: 0
[2025-11-27 04:59:12] 2025-11-27 09:59:10,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:59:12] 2025-11-27 09:59:10,767 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:59:12] 2025-11-27 09:59:10,783 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:59:12] 2025-11-27 09:59:10,818 [wrapper] pilotpid: 1917643
[2025-11-27 04:59:12] 2025-11-27 09:59:10,873 [wrapper] Pilot exit status: 0
[2025-11-27 04:59:12] 2025-11-27 09:59:11,031 [wrapper] pandaids: 6891107006
[2025-11-27 04:59:12] 2025-11-27 09:59:11,969 [wrapper] cleanup supervisor_pilot 3829189 1917644
[2025-11-27 04:59:12] 2025-11-27 09:59:11,999 [wrapper] Test setup, not cleaning
[2025-11-27 04:59:12] 2025-11-27 09:59:12,066 [wrapper] apfmon messages muted
[2025-11-27 04:59:12] 2025-11-27 09:59:12,110 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:59:12] 2025-11-27 09:59:12,146 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:59:12]  *** Error codes and diagnostics ***
[2025-11-27 04:59:12]     "exeErrorCode": 0,
[2025-11-27 04:59:12]     "exeErrorDiag": "",
[2025-11-27 04:59:12]     "pilotErrorCode": 0,
[2025-11-27 04:59:12]     "pilotErrorDiag": "",
[2025-11-27 04:59:12]  *** Listing of results directory ***
[2025-11-27 04:59:12] total 1328912
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 04:59:12] -rwx------. 1 boincer umatlas     36292 Nov 18 01:58 runpilot2-wrapper.sh
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:59:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-27 04:59:12] -rw-r--r--. 2 boincer umatlas 410001629 Nov 26 00:03 EVNT.47483658._000284.pool.root.1
[2025-11-27 04:59:12] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:03 start_atlas.sh
[2025-11-27 04:59:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-27 04:59:12] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 00:03 input.tar.gz
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:03 pandaJob.out
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-27 04:59:12] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:46 boinc_task_state.xml
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 04:57 init_data.xml
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas 915341925 Nov 27 04:57 HITS.47483661._002538.pool.root.1
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas      1079 Nov 27 04:57 memory_monitor_summary.json
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas   2744674 Nov 27 04:57 log.47483661._002538.job.log.tgz.1
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas      8613 Nov 27 04:58 heartbeat.json
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas        95 Nov 27 04:58 pilot_heartbeat.json
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:59 boinc_mmap_file
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:59 wrapper_checkpoint.txt
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas      4825 Nov 27 04:59 pilotlog.txt
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas  13022127 Nov 27 04:59 log.47483661._002538.job.log.1
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas       353 Nov 27 04:59 output.list
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:59 runtime_log
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas  15790080 Nov 27 04:59 result.tar.gz
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas      8700 Nov 27 04:59 runtime_log.err
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas       667 Nov 27 04:59 dciMDmgqUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDm47qMDmfryXJo.diag
[2025-11-27 04:59:12] -rw-r--r--. 1 boincer umatlas     21368 Nov 27 04:59 stderr.txt
[2025-11-27 04:59:12] HITS file was successfully produced:
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas 915341925 Nov 27 04:57 shared/HITS.pool.root.1
[2025-11-27 04:59:12]  *** Contents of shared directory: ***
[2025-11-27 04:59:12] total 1310312
[2025-11-27 04:59:12] -rw-r--r--. 2 boincer umatlas 410001629 Nov 26 00:03 ATLAS.root_0
[2025-11-27 04:59:12] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:03 start_atlas.sh
[2025-11-27 04:59:12] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 00:03 input.tar.gz
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas 915341925 Nov 27 04:57 HITS.pool.root.1
[2025-11-27 04:59:12] -rw-------. 1 boincer umatlas  15790080 Nov 27 04:59 result.tar.gz
04:59:14 (1908595): run_atlas exited; CPU time 221252.802040
04:59:14 (1908595): called boinc_finish(0)

</stderr_txt>
]]>

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