Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:11 (1911083): wrapper (7.7.26015): starting
00:04:11 (1911083): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:11] Arguments: --nthreads 9
[2025-11-26 00:04:11] Threads: 9
[2025-11-26 00:04:11] Checking for CVMFS
[2025-11-26 00:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:12] 2.13.2.0 6751 33901 258036 153309 2 582 33837283 40960001 23342 16776704 0 101023903 99.582 104744090 36684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:12] CVMFS is ok
[2025-11-26 00:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:12] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:12] Checking for apptainer binary...
[2025-11-26 00:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:12] Running /usr/bin/apptainer --version
[2025-11-26 00:04:12] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:13] c-212-7.aglt2.org
[2025-11-26 00:04:13] apptainer works
[2025-11-26 00:04:13] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:13] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:13] Starting ATLAS job with PandaID=6891106906
[2025-11-26 00:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:04:23]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:04:23] 2025-11-27 09:03:11,658 | INFO     | monitor loop #6054: job 0:6891106906 is in state 'finished'
[2025-11-27 04:04:23] 2025-11-27 09:03:11,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:04:23] 2025-11-27 09:03:12,199 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 04:04:23] 2025-11-27 09:03:12,228 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2898.915125
[2025-11-27 04:04:23] 2025-11-27 09:03:12,243 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6891106906/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:04:23] 2025-11-27 09:03:12,244 | INFO     | extracted standard info from prmon json
[2025-11-27 04:04:23] 2025-11-27 09:03:12,244 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:04:23] 2025-11-27 09:03:12,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:04:23] 2025-11-27 09:03:12,282 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:04:23] 2025-11-27 09:03:12,284 | INFO     | sum of square deviations: 1387868211606.3462
[2025-11-27 04:04:23] 2025-11-27 09:03:12,339 | INFO     | sum of deviations: 9792959158226.447
[2025-11-27 04:04:23] 2025-11-27 09:03:12,339 | INFO     | mean x: 1764183870.5910194
[2025-11-27 04:04:23] 2025-11-27 09:03:12,339 | INFO     | mean y: 2940628.907160194
[2025-11-27 04:04:23] 2025-11-27 09:03:12,339 | INFO     | intersect: -12445345489.198713
[2025-11-27 04:04:23] 2025-11-27 09:03:12,341 | INFO     | chi2: 9.277839682724537
[2025-11-27 04:04:23] 2025-11-27 09:03:12,342 | INFO     | sum of square deviations: 1375274700600.379
[2025-11-27 04:04:23] 2025-11-27 09:03:12,396 | INFO     | sum of deviations: 10407049384027.555
[2025-11-27 04:04:23] 2025-11-27 09:03:12,397 | INFO     | mean x: 1764183718.0943396
[2025-11-27 04:04:23] 2025-11-27 09:03:12,397 | INFO     | mean y: 2948063.596469872
[2025-11-27 04:04:23] 2025-11-27 09:03:12,397 | INFO     | intersect: -13347073622.027548
[2025-11-27 04:04:23] 2025-11-27 09:03:12,398 | INFO     | chi2: 5.57666783412882
[2025-11-27 04:04:23] 2025-11-27 09:03:12,399 | INFO     | current chi2=5.57666783412882 (change=39.89260404539377 %)
[2025-11-27 04:04:23] 2025-11-27 09:03:12,400 | INFO     | sum of square deviations: 1362757509654.065
[2025-11-27 04:04:23] 2025-11-27 09:03:12,461 | INFO     | sum of deviations: 10643132909523.27
[2025-11-27 04:04:23] 2025-11-27 09:03:12,461 | INFO     | mean x: 1764183565.5970695
[2025-11-27 04:04:23] 2025-11-27 09:03:12,462 | INFO     | mean y: 2950935.017094017
[2025-11-27 04:04:23] 2025-11-27 09:03:12,462 | INFO     | intersect: -13775318516.759884
[2025-11-27 04:04:23] 2025-11-27 09:03:12,463 | INFO     | chi2: 4.403643831452975
[2025-11-27 04:04:23] 2025-11-27 09:03:12,463 | INFO     | current chi2=4.403643831452975 (change=21.03449654105306 %)
[2025-11-27 04:04:23] 2025-11-27 09:03:12,463 | INFO     | right removable region: 1637
[2025-11-27 04:04:23] 2025-11-27 09:03:12,465 | INFO     | sum of square deviations: 1375273603820.3767
[2025-11-27 04:04:23] 2025-11-27 09:03:12,661 | INFO     | sum of deviations: 9141757949986.828
[2025-11-27 04:04:23] 2025-11-27 09:03:12,661 | INFO     | mean x: 1764184023.0943396
[2025-11-27 04:04:23] 2025-11-27 09:03:12,680 | INFO     | mean y: 2948512.6914181374
[2025-11-27 04:04:23] 2025-11-27 09:03:12,680 | INFO     | intersect: -11723985875.899418
[2025-11-27 04:04:23] 2025-11-27 09:03:12,682 | INFO     | chi2: 5.48824223705766
[2025-11-27 04:04:23] 2025-11-27 09:03:12,682 | INFO     | current chi2=5.48824223705766 (change=40.84568795387959 %)
[2025-11-27 04:04:23] 2025-11-27 09:03:12,683 | INFO     | sum of square deviations: 1362755816724.6438
[2025-11-27 04:04:23] 2025-11-27 09:03:13,150 | INFO     | sum of deviations: 8939467377543.297
[2025-11-27 04:04:23] 2025-11-27 09:03:13,150 | INFO     | mean x: 1764184175.5952382
[2025-11-27 04:04:23] 2025-11-27 09:03:13,150 | INFO     | mean y: 2950975.501221001
[2025-11-27 04:04:23] 2025-11-27 09:03:13,150 | INFO     | intersect: -11569824346.505262
[2025-11-27 04:04:23] 2025-11-27 09:03:13,166 | INFO     | chi2: 5.200036330817113
[2025-11-27 04:04:23] 2025-11-27 09:03:13,166 | INFO     | current chi2=5.200036330817113 (change=5.251333556207227 %)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,166 | INFO     | left removable region: 20
[2025-11-27 04:04:23] 2025-11-27 09:03:13,168 | INFO     | sum of square deviations: 1311011893544.1682
[2025-11-27 04:04:23] 2025-11-27 09:03:13,197 | INFO     | time since job start (100679s) is within the limit (172800.0s)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,323 | INFO     | sum of deviations: 9481332878288.85
[2025-11-27 04:04:23] 2025-11-27 09:03:13,323 | INFO     | mean x: 1764184145.1020408
[2025-11-27 04:04:23] 2025-11-27 09:03:13,324 | INFO     | mean y: 2964856.019171305
[2025-11-27 04:04:23] 2025-11-27 09:03:13,324 | INFO     | intersect: -12755742536.858006
[2025-11-27 04:04:23] 2025-11-27 09:03:13,325 | INFO     | chi2: 0.20679003943064014
[2025-11-27 04:04:23] 2025-11-27 09:03:13,326 | INFO     | current memory leak: 7.23 B/s (using 1617 data points, chi2=0.21)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,328 | INFO     | could have reported an average CPU frequency of 3020 MHz (59 samples)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,328 | INFO     | ..............................
[2025-11-27 04:04:23] 2025-11-27 09:03:13,328 | INFO     | . Timing measurements:
[2025-11-27 04:04:23] 2025-11-27 09:03:13,328 | INFO     | . get job = 0 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | . initial setup = 4 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | . payload setup = 36 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | . stage-in = 0 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | . payload execution = 100532 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | . stage-out = 7 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | . log creation = 2 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,329 | INFO     | ..............................
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | 
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | job summary report
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | --------------------------------------------------
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | PanDA job id: 6891106906
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | task id: 47483661
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | errors: (none)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | pilot state: finished 
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | transexitcode: 0
[2025-11-27 04:04:23] 2025-11-27 09:03:13,869 | INFO     | exeerrorcode: 0
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | exeerrordiag: 
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | exitcode: 0
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | exitmsg: OK
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | cpuconsumptiontime: 219301 s
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | nevents: 1000
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | neventsw: 0
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | pid: 1953713
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | pgrp: 1953713
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | corecount: 9
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | event service: False
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | sizes: {0: 2284127, 1: 2284326, 12: 2284326, 23: 2284354, 31: 2284644, 33: 2284672, 100572: 2355978, 100573: 2355977, 100580: 2365027, 100584: 2365083, 100622: 236
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | --------------------------------------------------
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | 
[2025-11-27 04:04:23] 2025-11-27 09:03:13,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 04:04:23] 2025-11-27 09:03:13,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:04:23] 2025-11-27 09:03:13,912 | INFO     | job 6891106906 has completed (purged errors)
[2025-11-27 04:04:23] 2025-11-27 09:03:13,912 | INFO     | overall cleanup function is called
[2025-11-27 04:04:23] 2025-11-27 09:03:14,937 | INFO     | --- collectZombieJob: --- 10, [1953713]
[2025-11-27 04:04:23] 2025-11-27 09:03:14,937 | INFO     | zombie collector waiting for pid 1953713
[2025-11-27 04:04:23] 2025-11-27 09:03:14,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:04:23] 2025-11-27 09:03:14,937 | INFO     | collected zombie processes
[2025-11-27 04:04:23] 2025-11-27 09:03:14,937 | INFO     | will attempt to kill all subprocesses of pid=1953713
[2025-11-27 04:04:23] 2025-11-27 09:03:15,518 | INFO     | process IDs to be killed: [1953713] (in reverse order)
[2025-11-27 04:04:23] 2025-11-27 09:03:17,543 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:04:23] 2025-11-27 09:03:17,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:04:23] 2025-11-27 09:03:17,841 | INFO     | did not find any defunct processes belonging to 1953713
[2025-11-27 04:04:23] 2025-11-27 09:03:17,858 | INFO     | did not find any defunct processes belonging to 1953713
[2025-11-27 04:04:23] 2025-11-27 09:03:17,859 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:04:23] 2025-11-27 09:03:17,860 | INFO     | ready for new job
[2025-11-27 04:04:23] 2025-11-27 09:03:17,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:04:23] 2025-11-27 09:03:17,866 | INFO     | ***************************************
[2025-11-27 04:04:23] 2025-11-27 09:03:17,866 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:04:23] 2025-11-27 09:03:17,866 | INFO     | ***************************************
[2025-11-27 04:04:23] 2025-11-27 09:03:17,866 | INFO     | 
[2025-11-27 04:04:23] 2025-11-27 09:03:17,872 | INFO     | architecture information:
[2025-11-27 04:04:23] 2025-11-27 09:03:17,872 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:04:23] 2025-11-27 09:03:17,995 | INFO     | cat /etc/os-release:
[2025-11-27 04:04:23] NAME="CentOS Linux"
[2025-11-27 04:04:23] VERSION="7 (Core)"
[2025-11-27 04:04:23] ID="centos"
[2025-11-27 04:04:23] ID_LIKE="rhel fedora"
[2025-11-27 04:04:23] VERSION_ID="7"
[2025-11-27 04:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:04:23] ANSI_COLOR="0;31"
[2025-11-27 04:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:04:23] HOME_URL="https://www.centos.org/"
[2025-11-27 04:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:04:23] 
[2025-11-27 04:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:04:23] 
[2025-11-27 04:04:23] 2025-11-27 09:03:17,995 | INFO     | ***************************************
[2025-11-27 04:04:23] 2025-11-27 09:03:18,499 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 04:04:23] 2025-11-27 09:03:18,596 | INFO     | sufficient remaining disk space (120129060864 B)
[2025-11-27 04:04:23] 2025-11-27 09:03:18,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:04:23] 2025-11-27 09:03:18,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:04:23] 2025-11-27 09:03:18,597 | INFO     | update_server=False
[2025-11-27 04:04:23] 2025-11-27 09:03:18,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:04:23] 2025-11-27 09:03:18,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:04:23] 2025-11-27 09:03:18,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:04:23] 2025-11-27 09:03:18,618 | INFO     | aborting loop
[2025-11-27 04:04:23] 2025-11-27 09:03:18,909 | INFO     | all data control threads have been joined
[2025-11-27 04:04:23] 2025-11-27 09:03:19,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:04:23] 2025-11-27 09:03:19,474 | INFO     | all payload control threads have been joined
[2025-11-27 04:04:23] 2025-11-27 09:03:19,604 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:19,615 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:19,624 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:19,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:19,917 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:19,918 | INFO     | [data] control thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,102 | INFO     | all job control threads have been joined
[2025-11-27 04:04:23] 2025-11-27 09:03:20,119 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,381 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,489 | INFO     | [payload] control thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,602 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,646 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,652 | INFO     | [job] validate thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:20,769 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:21,118 | INFO     | [job] control thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:21,282 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:21,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:04:23] 2025-11-27 09:03:25,339 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:04:23] 2025-11-27 09:03:47,886 | INFO     | PID=1920690 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:04:23] 2025-11-27 09:03:47,886 | INFO     | .. there are 26 such processes running
[2025-11-27 04:04:23] 2025-11-27 09:03:47,921 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:04:23] 2025-11-27 09:03:47,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:04:23] 2025-11-27 09:03:47,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:04:23] 2025-11-27 09:04:14,752 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:04:23] 2025-11-27 09:04:15,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491076015936)>', '<ExcThread(monitor, started 140490594842368)>']
[2025-11-27 04:04:23] 2025-11-27 09:04:16,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:04:23] 2025-11-27 09:04:16,196 | INFO     | [monitor] control thread has ended
[2025-11-27 04:04:23] 2025-11-27 09:04:20,428 | INFO     | all workflow threads have been joined
[2025-11-27 04:04:23] 2025-11-27 09:04:20,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:04:23] 2025-11-27 09:04:20,428 | INFO     | traces error code: 0
[2025-11-27 04:04:23] 2025-11-27 09:04:20,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:04:23] 2025-11-27 09:04:21,531 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:04:23] 2025-11-27 09:04:21,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:04:23] 2025-11-27 09:04:21,647 [wrapper] pilotpid: 1920690
[2025-11-27 04:04:23] 2025-11-27 09:04:21,748 [wrapper] Pilot exit status: 0
[2025-11-27 04:04:23] 2025-11-27 09:04:22,135 [wrapper] pandaids: 6891106906
[2025-11-27 04:04:23] 2025-11-27 09:04:22,761 [wrapper] cleanup supervisor_pilot 3680872 1920691
[2025-11-27 04:04:23] 2025-11-27 09:04:22,939 [wrapper] Test setup, not cleaning
[2025-11-27 04:04:23] 2025-11-27 09:04:22,975 [wrapper] apfmon messages muted
[2025-11-27 04:04:23] 2025-11-27 09:04:23,005 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:04:23] 2025-11-27 09:04:23,017 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:04:24]  *** Error codes and diagnostics ***
[2025-11-27 04:04:24]     "exeErrorCode": 0,
[2025-11-27 04:04:24]     "exeErrorDiag": "",
[2025-11-27 04:04:24]     "pilotErrorCode": 0,
[2025-11-27 04:04:24]     "pilotErrorDiag": "",
[2025-11-27 04:04:24]  *** Listing of results directory ***
[2025-11-27 04:04:24] total 1333284
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:57 queuedata.json
[2025-11-27 04:04:24] -rwx------. 1 boincer umatlas     36292 Nov 18 01:58 runpilot2-wrapper.sh
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:04:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 04:04:24] -rw-r--r--. 2 boincer umatlas 412594984 Nov 26 00:04 EVNT.47483658._000281.pool.root.1
[2025-11-27 04:04:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 04:04:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 04:04:24] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:04 input.tar.gz
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas      2770 Nov 26 00:04 pandaJob.out
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 04:04:24] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:52 boinc_task_state.xml
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas 918065970 Nov 27 03:59 HITS.47483661._002501.pool.root.1
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas      1065 Nov 27 04:02 memory_monitor_summary.json
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas   2701314 Nov 27 04:02 log.47483661._002501.job.log.tgz.1
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas      8607 Nov 27 04:03 heartbeat.json
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 04:03 init_data.xml
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas        95 Nov 27 04:03 pilot_heartbeat.json
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:04 boinc_mmap_file
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:04 wrapper_checkpoint.txt
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas      4825 Nov 27 04:04 pilotlog.txt
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas  12647741 Nov 27 04:04 log.47483661._002501.job.log.1
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas       353 Nov 27 04:04 output.list
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:04 runtime_log
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas  15370240 Nov 27 04:04 result.tar.gz
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas       667 Nov 27 04:04 Wm3KDmSqUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDmo7qMDmDDWjyn.diag
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas      8700 Nov 27 04:04 runtime_log.err
[2025-11-27 04:04:24] -rw-r--r--. 1 boincer umatlas     21376 Nov 27 04:04 stderr.txt
[2025-11-27 04:04:24] HITS file was successfully produced:
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas 918065970 Nov 27 03:59 shared/HITS.pool.root.1
[2025-11-27 04:04:24]  *** Contents of shared directory: ***
[2025-11-27 04:04:24] total 1315096
[2025-11-27 04:04:24] -rw-r--r--. 2 boincer umatlas 412594984 Nov 26 00:04 ATLAS.root_0
[2025-11-27 04:04:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-27 04:04:24] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:04 input.tar.gz
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas 918065970 Nov 27 03:59 HITS.pool.root.1
[2025-11-27 04:04:24] -rw-------. 1 boincer umatlas  15370240 Nov 27 04:04 result.tar.gz
04:04:26 (1911083): run_atlas exited; CPU time 219960.194206
04:04:26 (1911083): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN