Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:21 (3735703): wrapper (7.7.26015): starting
00:02:21 (3735703): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:21] Arguments: --nthreads 9
[2025-11-27 00:02:21] Threads: 9
[2025-11-27 00:02:21] Checking for CVMFS
[2025-11-27 00:02:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:22] 2.13.3.0 11393 31045 343720 153347 2 589 32818808 32935936 21669 16776704 0 95319747 99.390 150625116 41074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:22] CVMFS is ok
[2025-11-27 00:02:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:22] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:22] Checking for apptainer binary...
[2025-11-27 00:02:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:22] Running /usr/bin/apptainer --version
[2025-11-27 00:02:22] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:23] c6-5-37-2.aglt2.org
[2025-11-27 00:02:23] apptainer works
[2025-11-27 00:02:23] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:23] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:23] Starting ATLAS job with PandaID=6896201816
[2025-11-27 00:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:28:19]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:28:19] 2025-11-28 05:38:28,131 | INFO     | sum of square deviations: 941370373144.0751
[2025-11-28 04:28:19] 2025-11-28 05:38:28,258 | INFO     | sum of deviations: 6416295120534.47
[2025-11-28 04:28:19] 2025-11-28 05:38:28,259 | INFO     | mean x: 1764264141.1015193
[2025-11-28 04:28:19] 2025-11-28 05:38:28,259 | INFO     | mean y: 3088216.7859116024
[2025-11-28 04:28:19] 2025-11-28 05:38:28,259 | INFO     | intersect: -12021976224.190609
[2025-11-28 04:28:19] 2025-11-28 05:38:28,262 | INFO     | chi2: 13.608785340594116
[2025-11-28 04:28:19] 2025-11-28 05:38:28,259 | INFO     | monitor loop #5137: job 0:6896201816 is in state 'finished'
[2025-11-28 04:28:19] 2025-11-28 05:38:28,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,264 | INFO     | sum of square deviations: 931653307013.9966
[2025-11-28 04:28:19] 2025-11-28 05:38:28,315 | INFO     | sum of deviations: 6977306120025.441
[2025-11-28 04:28:19] 2025-11-28 05:38:28,316 | INFO     | mean x: 1764263988.6139987
[2025-11-28 04:28:19] 2025-11-28 05:38:28,316 | INFO     | mean y: 3097020.86971587
[2025-11-28 04:28:19] 2025-11-28 05:38:28,316 | INFO     | intersect: -13209768572.395454
[2025-11-28 04:28:19] 2025-11-28 05:38:28,318 | INFO     | chi2: 10.005634821880037
[2025-11-28 04:28:19] 2025-11-28 05:38:28,318 | INFO     | current chi2=10.005634821880037 (change=26.47665040292845 %)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,320 | INFO     | sum of square deviations: 922003095096.7183
[2025-11-28 04:28:19] 2025-11-28 05:38:28,360 | INFO     | sum of deviations: 7322723851485.112
[2025-11-28 04:28:19] 2025-11-28 05:38:28,360 | INFO     | mean x: 1764263836.1244783
[2025-11-28 04:28:19] 2025-11-28 05:38:28,360 | INFO     | mean y: 3102476.16689847
[2025-11-28 04:28:19] 2025-11-28 05:38:28,360 | INFO     | intersect: -14009016291.987682
[2025-11-28 04:28:19] 2025-11-28 05:38:28,362 | INFO     | chi2: 8.34308284893814
[2025-11-28 04:28:19] 2025-11-28 05:38:28,362 | INFO     | current chi2=8.34308284893814 (change=16.61615682101725 %)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,362 | INFO     | right removable region: 1437
[2025-11-28 04:28:19] 2025-11-28 05:38:28,364 | INFO     | sum of square deviations: 931650214198.2231
[2025-11-28 04:28:19] 2025-11-28 05:38:28,412 | INFO     | sum of deviations: 5800919100636.72
[2025-11-28 04:28:19] 2025-11-28 05:38:28,412 | INFO     | mean x: 1764264293.6133056
[2025-11-28 04:28:19] 2025-11-28 05:38:28,413 | INFO     | mean y: 3097870.8274428276
[2025-11-28 04:28:19] 2025-11-28 05:38:28,413 | INFO     | intersect: -10982091939.063221
[2025-11-28 04:28:19] 2025-11-28 05:38:28,415 | INFO     | chi2: 9.570736845965365
[2025-11-28 04:28:19] 2025-11-28 05:38:28,415 | INFO     | current chi2=9.570736845965365 (change=29.672365266748063 %)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,417 | INFO     | sum of square deviations: 921997084760.2168
[2025-11-28 04:28:19] 2025-11-28 05:38:28,453 | INFO     | sum of deviations: 5263967883647.522
[2025-11-28 04:28:19] 2025-11-28 05:38:28,454 | INFO     | mean x: 1764264446.1258693
[2025-11-28 04:28:19] 2025-11-28 05:38:28,454 | INFO     | mean y: 3106352.079972184
[2025-11-28 04:28:19] 2025-11-28 05:38:28,454 | INFO     | intersect: -10069627646.946753
[2025-11-28 04:28:19] 2025-11-28 05:38:28,455 | INFO     | chi2: 6.587505936708208
[2025-11-28 04:28:19] 2025-11-28 05:38:28,455 | INFO     | current chi2=6.587505936708208 (change=31.170336801337996 %)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,457 | INFO     | sum of square deviations: 912411978302.2379
[2025-11-28 04:28:19] 2025-11-28 05:38:28,495 | INFO     | sum of deviations: 5053116210784.369
[2025-11-28 04:28:19] 2025-11-28 05:38:28,495 | INFO     | mean x: 1764264598.6294487
[2025-11-28 04:28:19] 2025-11-28 05:38:28,496 | INFO     | mean y: 3109704.4319609213
[2025-11-28 04:28:19] 2025-11-28 05:38:28,496 | INFO     | intersect: -9767733133.510622
[2025-11-28 04:28:19] 2025-11-28 05:38:28,497 | INFO     | chi2: 6.170204183909051
[2025-11-28 04:28:19] 2025-11-28 05:38:28,497 | INFO     | current chi2=6.170204183909051 (change=6.3347457567178145 %)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,497 | INFO     | left removable region: 30
[2025-11-28 04:28:19] 2025-11-28 05:38:28,499 | INFO     | sum of square deviations: 863643690180.5642
[2025-11-28 04:28:19] 2025-11-28 05:38:28,531 | INFO     | sum of deviations: 5625598363727.803
[2025-11-28 04:28:19] 2025-11-28 05:38:28,531 | INFO     | mean x: 1764264720.6581378
[2025-11-28 04:28:19] 2025-11-28 05:38:28,531 | INFO     | mean y: 3130836.9559346125
[2025-11-28 04:28:19] 2025-11-28 05:38:28,532 | INFO     | intersect: -11488928722.515928
[2025-11-28 04:28:19] 2025-11-28 05:38:28,533 | INFO     | chi2: 0.5802066633372043
[2025-11-28 04:28:19] 2025-11-28 05:38:28,533 | INFO     | current memory leak: 6.51 B/s (using 1407 data points, chi2=0.58)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,535 | INFO     | could have reported an average CPU frequency of 2807 MHz (51 samples)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,535 | INFO     | ..............................
[2025-11-28 04:28:19] 2025-11-28 05:38:28,535 | INFO     | . Timing measurements:
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . get job = 1 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . initial setup = 4 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . payload setup = 59 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . stage-in = 0 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . payload execution = 88329 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . stage-out = 3 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | . log creation = 0 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,536 | INFO     | ..............................
[2025-11-28 04:28:19] 2025-11-28 05:38:28,647 | INFO     | 
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | job summary report
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | --------------------------------------------------
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | PanDA job id: 6896201816
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | task id: 47556185
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | errors: (none)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | pilot state: finished 
[2025-11-28 04:28:19] 2025-11-28 05:38:28,648 | INFO     | transexitcode: 0
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | exeerrorcode: 0
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | exeerrordiag: 
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | exitcode: 0
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | exitmsg: OK
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | cpuconsumptiontime: 248385 s
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | nevents: 1000
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | neventsw: 0
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | pid: 3791020
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | pgrp: 3791020
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | corecount: 9
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | event service: False
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | sizes: {0: 2284089, 1: 2284288, 2: 2284288, 13: 2284316, 25: 2284372, 36: 2284400, 39: 2284818, 47: 2284846, 88390: 2349790, 88395: 2358784, 88396: 2358840, 88406:
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | --------------------------------------------------
[2025-11-28 04:28:19] 2025-11-28 05:38:28,649 | INFO     | 
[2025-11-28 04:28:19] 2025-11-28 05:38:28,650 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-28 04:28:19] 2025-11-28 05:38:28,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:28:19] 2025-11-28 05:38:28,688 | INFO     | job 6896201816 has completed (purged errors)
[2025-11-28 04:28:19] 2025-11-28 05:38:28,688 | INFO     | overall cleanup function is called
[2025-11-28 04:28:19] 2025-11-28 05:38:29,708 | INFO     | --- collectZombieJob: --- 10, [3791020]
[2025-11-28 04:28:19] 2025-11-28 05:38:29,708 | INFO     | zombie collector waiting for pid 3791020
[2025-11-28 04:28:19] 2025-11-28 05:38:29,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:28:19] 2025-11-28 05:38:29,709 | INFO     | collected zombie processes
[2025-11-28 04:28:19] 2025-11-28 05:38:29,709 | INFO     | will attempt to kill all subprocesses of pid=3791020
[2025-11-28 04:28:19] 2025-11-28 05:38:30,204 | INFO     | process IDs to be killed: [3791020] (in reverse order)
[2025-11-28 04:28:19] 2025-11-28 05:38:30,368 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:28:19] 2025-11-28 05:38:30,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:28:19] 2025-11-28 05:38:30,380 | INFO     | did not find any defunct processes belonging to 3791020
[2025-11-28 04:28:19] 2025-11-28 05:38:30,391 | INFO     | did not find any defunct processes belonging to 3791020
[2025-11-28 04:28:19] 2025-11-28 05:38:30,392 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:28:19] 2025-11-28 05:38:30,392 | INFO     | ready for new job
[2025-11-28 04:28:19] 2025-11-28 05:38:30,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:28:19] 2025-11-28 05:38:30,402 | INFO     | ***************************************
[2025-11-28 04:28:19] 2025-11-28 05:38:30,403 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:28:19] 2025-11-28 05:38:30,403 | INFO     | ***************************************
[2025-11-28 04:28:19] 2025-11-28 05:38:30,403 | INFO     | 
[2025-11-28 04:28:19] 2025-11-28 05:38:30,407 | INFO     | architecture information:
[2025-11-28 04:28:19] 2025-11-28 05:38:30,408 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:28:19] 2025-11-28 05:38:30,427 | INFO     | cat /etc/os-release:
[2025-11-28 04:28:19] NAME="CentOS Linux"
[2025-11-28 04:28:19] VERSION="7 (Core)"
[2025-11-28 04:28:19] ID="centos"
[2025-11-28 04:28:19] ID_LIKE="rhel fedora"
[2025-11-28 04:28:19] VERSION_ID="7"
[2025-11-28 04:28:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:28:19] ANSI_COLOR="0;31"
[2025-11-28 04:28:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:28:19] HOME_URL="https://www.centos.org/"
[2025-11-28 04:28:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:28:19] 
[2025-11-28 04:28:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:28:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:28:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:28:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:28:19] 
[2025-11-28 04:28:19] 2025-11-28 05:38:30,428 | INFO     | ***************************************
[2025-11-28 04:28:19] 2025-11-28 05:38:30,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-28 04:28:19] 2025-11-28 05:38:30,989 | INFO     | sufficient remaining disk space (70860668928 B)
[2025-11-28 04:28:19] 2025-11-28 05:38:30,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:28:19] 2025-11-28 05:38:30,990 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:28:19] 2025-11-28 05:38:30,990 | INFO     | update_server=False
[2025-11-28 04:28:19] 2025-11-28 05:38:30,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:28:19] 2025-11-28 05:38:30,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:28:19] 2025-11-28 05:38:31,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:28:19] 2025-11-28 05:38:31,649 | INFO     | all job control threads have been joined
[2025-11-28 04:28:19] 2025-11-28 05:38:31,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:28:19] 2025-11-28 05:38:31,775 | INFO     | aborting loop
[2025-11-28 04:28:19] 2025-11-28 05:38:31,845 | INFO     | all data control threads have been joined
[2025-11-28 04:28:19] 2025-11-28 05:38:31,998 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,015 | INFO     | [job] validate thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,052 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,229 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,268 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,367 | INFO     | all payload control threads have been joined
[2025-11-28 04:28:19] 2025-11-28 05:38:32,503 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,655 | INFO     | [job] control thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,781 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,790 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,851 | INFO     | [data] control thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:32,985 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:33,375 | INFO     | [payload] control thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:33,461 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:33,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:28:19] 2025-11-28 05:38:34,666 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:35,002 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:38:41,990 | INFO     | job.realtimelogging is not enabled
[2025-11-28 04:28:19] 2025-11-28 05:38:42,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:28:19] 2025-11-28 05:39:01,657 | INFO     | PID=3746538 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 04:28:19] 2025-11-28 05:39:01,657 | INFO     | .. there are 26 such processes running
[2025-11-28 04:28:19] 2025-11-28 05:39:01,658 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:28:19] 2025-11-28 05:39:01,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:28:19] 2025-11-28 05:39:01,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:28:19] 2025-11-28 05:39:23,808 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:28:19] 2025-11-28 05:39:24,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690699745088)>', '<ExcThread(monitor, started 139689809913600)>']
[2025-11-28 04:28:19] 2025-11-28 05:39:24,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:28:19] 2025-11-28 05:39:24,803 | INFO     | [monitor] control thread has ended
[2025-11-28 04:28:19] 2025-11-28 05:39:29,557 | INFO     | all workflow threads have been joined
[2025-11-28 04:28:19] 2025-11-28 05:39:29,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:28:19] 2025-11-28 05:39:29,558 | INFO     | traces error code: 0
[2025-11-28 04:28:19] 2025-11-28 05:39:29,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:28:19] 2025-11-28 05:39:30,081 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:28:19] 2025-11-28 05:39:30,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:28:19] 2025-11-28 05:39:30,098 [wrapper] pilotpid: 3746538
[2025-11-28 04:28:19] 2025-11-28 05:39:30,103 [wrapper] Pilot exit status: 0
[2025-11-28 04:28:19] 2025-11-28 05:39:30,129 [wrapper] pandaids: 6896201816
[2025-11-28 04:28:19] 2025-11-28 05:39:30,201 [wrapper] cleanup supervisor_pilot 3696215 3746539
[2025-11-28 04:28:19] 2025-11-28 05:39:30,205 [wrapper] Test setup, not cleaning
[2025-11-28 04:28:19] 2025-11-28 05:39:30,212 [wrapper] apfmon messages muted
[2025-11-28 04:28:19] 2025-11-28 05:39:30,239 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:28:19] 2025-11-28 05:39:30,253 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:28:19]  *** Error codes and diagnostics ***
[2025-11-28 04:28:19]     "exeErrorCode": 0,
[2025-11-28 04:28:19]     "exeErrorDiag": "",
[2025-11-28 04:28:19]     "pilotErrorCode": 0,
[2025-11-28 04:28:19]     "pilotErrorDiag": "",
[2025-11-28 04:28:19]  *** Listing of results directory ***
[2025-11-28 04:28:19] total 1333108
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:21 queuedata.json
[2025-11-28 04:28:19] -rwx------. 1 boincer umatlas     36292 Nov 24 14:24 runpilot2-wrapper.sh
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:28:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-28 04:28:19] -rw-r--r--. 2 boincer umatlas 413483262 Nov 27 00:02 EVNT.47483658._004242.pool.root.1
[2025-11-28 04:28:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-28 04:28:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-28 04:28:19] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas      2783 Nov 27 00:02 pandaJob.out
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-28 04:28:19] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas       533 Nov 28 00:23 boinc_task_state.xml
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas 920722335 Nov 28 00:37 HITS.47556185._000058.pool.root.1
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas      1057 Nov 28 00:38 memory_monitor_summary.json
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas   1516240 Nov 28 00:38 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas   2558390 Nov 28 00:38 log.47556185._000058.job.log.tgz.1
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas      8621 Nov 28 00:38 heartbeat.json
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas        95 Nov 28 00:39 pilot_heartbeat.json
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas      4896 Nov 28 00:39 pilotlog.txt
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas  10931494 Nov 28 00:39 log.47556185._000058.job.log.1
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas       353 Nov 28 00:39 output.list
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas       620 Nov 28 00:39 runtime_log
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas  13506560 Nov 28 00:39 result.tar.gz
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas       661 Nov 28 00:39 sKZNDmlLrh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0AJKDm9KaNUm.diag
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas      9348 Nov 28 00:39 runtime_log.err
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas      6843 Nov 28 04:28 init_data.xml
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas        29 Nov 28 04:28 wrapper_checkpoint.txt
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 04:28 boinc_mmap_file
[2025-11-28 04:28:19] -rw-r--r--. 1 boincer umatlas     21232 Nov 28 04:28 stderr.txt
[2025-11-28 04:28:19] HITS file was successfully produced:
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas 920722335 Nov 28 00:37 shared/HITS.pool.root.1
[2025-11-28 04:28:19]  *** Contents of shared directory: ***
[2025-11-28 04:28:19] total 1316732
[2025-11-28 04:28:19] -rw-r--r--. 2 boincer umatlas 413483262 Nov 27 00:02 ATLAS.root_0
[2025-11-28 04:28:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-28 04:28:19] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas 920722335 Nov 28 00:37 HITS.pool.root.1
[2025-11-28 04:28:19] -rw-------. 1 boincer umatlas  13506560 Nov 28 00:39 result.tar.gz
04:28:21 (3735703): run_atlas exited; CPU time 250314.547668
04:28:21 (3735703): called boinc_finish(0)

</stderr_txt>
]]>

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