Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:33 (2118661): wrapper (7.7.26015): starting
00:03:33 (2118661): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:03:34] Arguments: --nthreads 8
[2025-11-26 00:03:34] Threads: 8
[2025-11-26 00:03:34] Checking for CVMFS
[2025-11-26 00:03:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:35] 2.13.2.0 6529 33322 461988 153309 3 134 31010413 40960001 17621 16776704 0 73620757 99.574 83265938 39749 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:03:35] CVMFS is ok
[2025-11-26 00:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:36] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:36] Checking for apptainer binary...
[2025-11-26 00:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:36] Running /usr/bin/apptainer --version
[2025-11-26 00:03:36] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:36] c-206-36.aglt2.org
[2025-11-26 00:03:36] apptainer works
[2025-11-26 00:03:36] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:03:36] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:03:37] Starting ATLAS job with PandaID=6896715566
[2025-11-26 00:03:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:45:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:45:48] 2025-11-27 09:44:39,787 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:45:48] 2025-11-27 09:44:39,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:45:48] 2025-11-27 09:44:39,812 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:45:48] 2025-11-27 09:44:39,814 | INFO     | sum of square deviations: 1496611921747.5168
[2025-11-27 04:45:48] 2025-11-27 09:44:39,869 | INFO     | sum of deviations: 8465122579850.175
[2025-11-27 04:45:48] 2025-11-27 09:44:39,869 | INFO     | mean x: 1764185107.647929
[2025-11-27 04:45:48] 2025-11-27 09:44:39,869 | INFO     | mean y: 2862991.0792899407
[2025-11-27 04:45:48] 2025-11-27 09:44:39,869 | INFO     | intersect: -9975704580.631739
[2025-11-27 04:45:48] 2025-11-27 09:44:39,871 | INFO     | chi2: 12.360900331708166
[2025-11-27 04:45:48] 2025-11-27 09:44:39,873 | INFO     | sum of square deviations: 1483368890438.7332
[2025-11-27 04:45:48] 2025-11-27 09:44:39,926 | INFO     | sum of deviations: 9056490897348.734
[2025-11-27 04:45:48] 2025-11-27 09:44:39,926 | INFO     | mean x: 1764184955.1602373
[2025-11-27 04:45:48] 2025-11-27 09:44:39,926 | INFO     | mean y: 2869801.760237389
[2025-11-27 04:45:48] 2025-11-27 09:44:39,926 | INFO     | intersect: -10768102335.13195
[2025-11-27 04:45:48] 2025-11-27 09:44:39,928 | INFO     | chi2: 8.868105110076542
[2025-11-27 04:45:48] 2025-11-27 09:44:39,928 | INFO     | current chi2=8.868105110076542 (change=28.25680272392384 %)
[2025-11-27 04:45:48] 2025-11-27 09:44:39,929 | INFO     | sum of square deviations: 1470203924844.97
[2025-11-27 04:45:48] 2025-11-27 09:44:39,983 | INFO     | sum of deviations: 9527761230535.86
[2025-11-27 04:45:48] 2025-11-27 09:44:39,983 | INFO     | mean x: 1764184802.6708333
[2025-11-27 04:45:48] 2025-11-27 09:44:39,983 | INFO     | mean y: 2875257.0648809522
[2025-11-27 04:45:48] 2025-11-27 09:44:39,983 | INFO     | intersect: -11430049987.071009
[2025-11-27 04:45:48] 2025-11-27 09:44:39,985 | INFO     | chi2: 6.216548566303155
[2025-11-27 04:45:48] 2025-11-27 09:44:39,985 | INFO     | current chi2=6.216548566303155 (change=29.899922371922592 %)
[2025-11-27 04:45:48] 2025-11-27 09:44:39,986 | INFO     | sum of square deviations: 1457116177853.0464
[2025-11-27 04:45:48] 2025-11-27 09:44:40,038 | INFO     | sum of deviations: 9502425588364.592
[2025-11-27 04:45:48] 2025-11-27 09:44:40,038 | INFO     | mean x: 1764184650.1761193
[2025-11-27 04:45:48] 2025-11-27 09:44:40,038 | INFO     | mean y: 2874961.214925373
[2025-11-27 04:45:48] 2025-11-27 09:44:40,038 | INFO     | intersect: -11502064464.503456
[2025-11-27 04:45:48] 2025-11-27 09:44:40,039 | INFO     | chi2: 6.180521925042841
[2025-11-27 04:45:48] 2025-11-27 09:44:40,039 | INFO     | current chi2=6.180521925042841 (change=0.5795280271048877 %)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,039 | INFO     | right removable region: 1674
[2025-11-27 04:45:48] 2025-11-27 09:44:40,040 | INFO     | sum of square deviations: 1483364614338.7322
[2025-11-27 04:45:48] 2025-11-27 09:44:40,091 | INFO     | sum of deviations: 7817599349795.881
[2025-11-27 04:45:48] 2025-11-27 09:44:40,092 | INFO     | mean x: 1764185260.1602373
[2025-11-27 04:45:48] 2025-11-27 09:44:40,092 | INFO     | mean y: 2870444.8522255193
[2025-11-27 04:45:48] 2025-11-27 09:44:40,092 | INFO     | intersect: -9294704412.62564
[2025-11-27 04:45:48] 2025-11-27 09:44:40,093 | INFO     | chi2: 8.611207429598561
[2025-11-27 04:45:48] 2025-11-27 09:44:40,093 | INFO     | current chi2=8.611207429598561 (change=30.33511153302399 %)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,095 | INFO     | sum of square deviations: 1470195680491.9392
[2025-11-27 04:45:48] 2025-11-27 09:44:40,146 | INFO     | sum of deviations: 7385163225259.448
[2025-11-27 04:45:48] 2025-11-27 09:44:40,146 | INFO     | mean x: 1764185412.672619
[2025-11-27 04:45:48] 2025-11-27 09:44:40,146 | INFO     | mean y: 2875452.288095238
[2025-11-27 04:45:48] 2025-11-27 09:44:40,146 | INFO     | intersect: -8859072249.700426
[2025-11-27 04:45:48] 2025-11-27 09:44:40,147 | INFO     | chi2: 7.152033695357986
[2025-11-27 04:45:48] 2025-11-27 09:44:40,147 | INFO     | current chi2=7.152033695357986 (change=16.94505382863132 %)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,148 | INFO     | left removable region: 20
[2025-11-27 04:45:48] 2025-11-27 09:44:40,149 | INFO     | sum of square deviations: 1402986510731.4375
[2025-11-27 04:45:48] 2025-11-27 09:44:40,194 | INFO     | sum of deviations: 8089616363619.502
[2025-11-27 04:45:48] 2025-11-27 09:44:40,195 | INFO     | mean x: 1764185229.7116082
[2025-11-27 04:45:48] 2025-11-27 09:44:40,195 | INFO     | mean y: 2891380.759975816
[2025-11-27 04:45:48] 2025-11-27 09:44:40,195 | INFO     | intersect: -10169395803.448563
[2025-11-27 04:45:48] 2025-11-27 09:44:40,196 | INFO     | chi2: 0.7412792831787774
[2025-11-27 04:45:48] 2025-11-27 09:44:40,196 | INFO     | current memory leak: 5.77 B/s (using 1654 data points, chi2=0.74)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,197 | INFO     | could have reported an average CPU frequency of 3201 MHz (59 samples)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | ..............................
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . Timing measurements:
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . get job = 0 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . initial setup = 4 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . payload setup = 31 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . stage-in = 0 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . payload execution = 103093 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . stage-out = 3 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | . log creation = 1 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,198 | INFO     | ..............................
[2025-11-27 04:45:48] 2025-11-27 09:44:40,274 | INFO     | 
[2025-11-27 04:45:48] 2025-11-27 09:44:40,274 | INFO     | job summary report
[2025-11-27 04:45:48] 2025-11-27 09:44:40,274 | INFO     | --------------------------------------------------
[2025-11-27 04:45:48] 2025-11-27 09:44:40,274 | INFO     | PanDA job id: 6896715566
[2025-11-27 04:45:48] 2025-11-27 09:44:40,274 | INFO     | task id: 47556161
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | errors: (none)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | pilot state: finished 
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | transexitcode: 0
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | exeerrorcode: 0
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | exeerrordiag: 
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | exitcode: 0
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | exitmsg: OK
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | cpuconsumptiontime: 200172 s
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | nevents: 1000
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | neventsw: 0
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | pid: 2161558
[2025-11-27 04:45:48] 2025-11-27 09:44:40,275 | INFO     | pgrp: 2161558
[2025-11-27 04:45:48] 2025-11-27 09:44:40,276 | INFO     | corecount: 8
[2025-11-27 04:45:48] 2025-11-27 09:44:40,276 | INFO     | event service: False
[2025-11-27 04:45:48] 2025-11-27 09:44:40,276 | INFO     | sizes: {0: 2284037, 1: 2284292, 2: 2284292, 13: 2284320, 24: 2284666, 34: 2284666, 103128: 2357905, 103132: 2366899, 103135: 2366955, 103147: 2367201}
[2025-11-27 04:45:48] 2025-11-27 09:44:40,276 | INFO     | --------------------------------------------------
[2025-11-27 04:45:48] 2025-11-27 09:44:40,276 | INFO     | 
[2025-11-27 04:45:48] 2025-11-27 09:44:40,276 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:45:48] 2025-11-27 09:44:40,299 | INFO     | job 6896715566 has completed (purged errors)
[2025-11-27 04:45:48] 2025-11-27 09:44:40,299 | INFO     | overall cleanup function is called
[2025-11-27 04:45:48] 2025-11-27 09:44:41,316 | INFO     | --- collectZombieJob: --- 10, [2161558]
[2025-11-27 04:45:48] 2025-11-27 09:44:41,316 | INFO     | zombie collector waiting for pid 2161558
[2025-11-27 04:45:48] 2025-11-27 09:44:41,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:45:48] 2025-11-27 09:44:41,316 | INFO     | collected zombie processes
[2025-11-27 04:45:48] 2025-11-27 09:44:41,316 | INFO     | will attempt to kill all subprocesses of pid=2161558
[2025-11-27 04:45:48] 2025-11-27 09:44:41,614 | INFO     | process IDs to be killed: [2161558] (in reverse order)
[2025-11-27 04:45:48] 2025-11-27 09:44:41,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:45:48] 2025-11-27 09:44:41,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:45:48] 2025-11-27 09:44:41,831 | INFO     | did not find any defunct processes belonging to 2161558
[2025-11-27 04:45:48] 2025-11-27 09:44:41,846 | INFO     | did not find any defunct processes belonging to 2161558
[2025-11-27 04:45:48] 2025-11-27 09:44:41,847 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:45:48] 2025-11-27 09:44:41,847 | INFO     | ready for new job
[2025-11-27 04:45:48] 2025-11-27 09:44:41,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:45:48] 2025-11-27 09:44:41,855 | INFO     | ***************************************
[2025-11-27 04:45:48] 2025-11-27 09:44:41,855 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:45:48] 2025-11-27 09:44:41,855 | INFO     | ***************************************
[2025-11-27 04:45:48] 2025-11-27 09:44:41,855 | INFO     | 
[2025-11-27 04:45:48] 2025-11-27 09:44:41,859 | INFO     | architecture information:
[2025-11-27 04:45:48] 2025-11-27 09:44:41,859 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:45:48] 2025-11-27 09:44:41,925 | INFO     | cat /etc/os-release:
[2025-11-27 04:45:48] NAME="CentOS Linux"
[2025-11-27 04:45:48] VERSION="7 (Core)"
[2025-11-27 04:45:48] ID="centos"
[2025-11-27 04:45:48] ID_LIKE="rhel fedora"
[2025-11-27 04:45:48] VERSION_ID="7"
[2025-11-27 04:45:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:45:48] ANSI_COLOR="0;31"
[2025-11-27 04:45:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:45:48] HOME_URL="https://www.centos.org/"
[2025-11-27 04:45:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:45:48] 
[2025-11-27 04:45:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:45:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:45:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:45:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:45:48] 
[2025-11-27 04:45:48] 2025-11-27 09:44:41,925 | INFO     | ***************************************
[2025-11-27 04:45:48] 2025-11-27 09:44:42,429 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 04:45:48] 2025-11-27 09:44:42,610 | INFO     | sufficient remaining disk space (81226891264 B)
[2025-11-27 04:45:48] 2025-11-27 09:44:42,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:45:48] 2025-11-27 09:44:42,611 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:45:48] 2025-11-27 09:44:42,611 | INFO     | update_server=False
[2025-11-27 04:45:48] 2025-11-27 09:44:42,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:45:48] 2025-11-27 09:44:42,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:45:48] 2025-11-27 09:44:42,619 | INFO     | aborting loop
[2025-11-27 04:45:48] 2025-11-27 09:44:42,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:45:48] 2025-11-27 09:44:42,859 | INFO     | all job control threads have been joined
[2025-11-27 04:45:48] 2025-11-27 09:44:42,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:45:48] 2025-11-27 09:44:43,274 | INFO     | all data control threads have been joined
[2025-11-27 04:45:48] 2025-11-27 09:44:43,617 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:43,636 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:43,644 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:43,744 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:43,794 | INFO     | all payload control threads have been joined
[2025-11-27 04:45:48] 2025-11-27 09:44:43,848 | INFO     | [job] validate thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:43,871 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:43,882 | INFO     | [job] control thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:44,280 | INFO     | [data] control thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:44,314 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:44,763 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:44,798 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:44,799 | INFO     | [payload] control thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:44,977 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:45,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:45,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:45:48] 2025-11-27 09:44:46,293 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:44:46,808 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:45:48] 2025-11-27 09:45:12,072 | INFO     | PID=2128502 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:45:48] 2025-11-27 09:45:12,072 | INFO     | .. there are 18 such processes running
[2025-11-27 04:45:48] 2025-11-27 09:45:12,072 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:45:48] 2025-11-27 09:45:12,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:45:48] 2025-11-27 09:45:12,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:45:48] 2025-11-27 09:45:41,651 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:45:48] 2025-11-27 09:45:42,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690120988480)>', '<ExcThread(monitor, started 139689029785344)>']
[2025-11-27 04:45:48] 2025-11-27 09:45:43,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:45:48] 2025-11-27 09:45:43,276 | INFO     | [monitor] control thread has ended
[2025-11-27 04:45:48] 2025-11-27 09:45:47,997 | INFO     | all workflow threads have been joined
[2025-11-27 04:45:48] 2025-11-27 09:45:47,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:45:48] 2025-11-27 09:45:47,999 | INFO     | traces error code: 0
[2025-11-27 04:45:48] 2025-11-27 09:45:47,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:45:48] 2025-11-27 09:45:48,137 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:45:48] 2025-11-27 09:45:48,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:45:48] 2025-11-27 09:45:48,143 [wrapper] pilotpid: 2128502
[2025-11-27 04:45:48] 2025-11-27 09:45:48,146 [wrapper] Pilot exit status: 0
[2025-11-27 04:45:48] 2025-11-27 09:45:48,178 [wrapper] pandaids: 6896715566
[2025-11-27 04:45:48] 2025-11-27 09:45:48,259 [wrapper] cleanup supervisor_pilot 2981029 2128503
[2025-11-27 04:45:48] 2025-11-27 09:45:48,262 [wrapper] Test setup, not cleaning
[2025-11-27 04:45:48] 2025-11-27 09:45:48,299 [wrapper] apfmon messages muted
[2025-11-27 04:45:48] 2025-11-27 09:45:48,318 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:45:48] 2025-11-27 09:45:48,321 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:45:48]  *** Error codes and diagnostics ***
[2025-11-27 04:45:48]     "exeErrorCode": 0,
[2025-11-27 04:45:48]     "exeErrorDiag": "",
[2025-11-27 04:45:48]     "pilotErrorCode": 0,
[2025-11-27 04:45:48]     "pilotErrorDiag": "",
[2025-11-27 04:45:48]  *** Listing of results directory ***
[2025-11-27 04:45:48] total 1327496
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 02:04 pilot3.tar.gz
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 02:12 queuedata.json
[2025-11-27 04:45:48] -rwx------. 1 boincer umatlas     36292 Nov 25 02:15 runpilot2-wrapper.sh
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:45:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-27 04:45:48] -rw-r--r--. 2 boincer umatlas 409691071 Nov 26 00:03 EVNT.47483658._002132.pool.root.1
[2025-11-27 04:45:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-27 04:45:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-27 04:45:48] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:03 input.tar.gz
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:03 pandaJob.out
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas        57 Nov 26 00:03 setup.sh.local
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-27 04:45:48] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas       532 Nov 27 04:32 boinc_task_state.xml
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas      6902 Nov 27 04:38 init_data.xml
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas 914634925 Nov 27 04:43 HITS.47556161._001157.pool.root.1
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas      1065 Nov 27 04:44 memory_monitor_summary.json
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:44 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas   2627617 Nov 27 04:44 log.47556161._001157.job.log.tgz.1
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas        95 Nov 27 04:44 pilot_heartbeat.json
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas      8613 Nov 27 04:44 heartbeat.json
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:45 boinc_mmap_file
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas        28 Nov 27 04:45 wrapper_checkpoint.txt
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas      4824 Nov 27 04:45 pilotlog.txt
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas  12922821 Nov 27 04:45 log.47556161._001157.job.log.1
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas       353 Nov 27 04:45 output.list
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:45 runtime_log
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas  15575040 Nov 27 04:45 result.tar.gz
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 04:45 runtime_log.err
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas       668 Nov 27 04:45 EdBLDmhR2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjEMKDmvH7tdm.diag
[2025-11-27 04:45:48] -rw-r--r--. 1 boincer umatlas     21156 Nov 27 04:45 stderr.txt
[2025-11-27 04:45:48] HITS file was successfully produced:
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas 914634925 Nov 27 04:43 shared/HITS.pool.root.1
[2025-11-27 04:45:48]  *** Contents of shared directory: ***
[2025-11-27 04:45:48] total 1309108
[2025-11-27 04:45:48] -rw-r--r--. 2 boincer umatlas 409691071 Nov 26 00:03 ATLAS.root_0
[2025-11-27 04:45:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-27 04:45:48] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:03 input.tar.gz
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas 914634925 Nov 27 04:43 HITS.pool.root.1
[2025-11-27 04:45:48] -rw-------. 1 boincer umatlas  15575040 Nov 27 04:45 result.tar.gz
04:45:50 (2118661): run_atlas exited; CPU time 200815.791825
04:45:50 (2118661): called boinc_finish(0)

</stderr_txt>
]]>

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