Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:37 (3008075): wrapper (7.7.26015): starting
00:02:37 (3008075): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:02:37] Arguments: --nthreads 9
[2025-11-26 00:02:37] Threads: 9
[2025-11-26 00:02:37] Checking for CVMFS
[2025-11-26 00:02:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:02:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:02:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:02:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:02:41] 2.13.2.0 5459 32432 197396 153309 2 406 38625007 39288832 8835 16776704 0 21798888 99.580 23892851 39565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:02:41] CVMFS is ok
[2025-11-26 00:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:02:41] Further information can be found at the LHC@home message board.
[2025-11-26 00:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:02:41] Checking for apptainer binary...
[2025-11-26 00:02:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:02:41] Running /usr/bin/apptainer --version
[2025-11-26 00:02:41] apptainer version 1.4.4-1.el9
[2025-11-26 00:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:02:43] c-210-26.aglt2.org
[2025-11-26 00:02:43] apptainer works
[2025-11-26 00:02:44] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:02:44] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:02:44] Starting ATLAS job with PandaID=6894238251
[2025-11-26 00:02:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:38:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:38:34] 2025-11-27 01:37:59,700 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:38:34] 2025-11-27 01:37:59,702 | INFO     | sum of square deviations: 547953227618.0763
[2025-11-26 20:38:34] 2025-11-27 01:37:59,747 | INFO     | sum of deviations: 2058871947613.2266
[2025-11-26 20:38:34] 2025-11-27 01:37:59,748 | INFO     | mean x: 1764170548.229942
[2025-11-26 20:38:34] 2025-11-27 01:37:59,748 | INFO     | mean y: 2612067.3804797353
[2025-11-26 20:38:34] 2025-11-27 01:37:59,748 | INFO     | intersect: -6626058172.130767
[2025-11-26 20:38:34] 2025-11-27 01:37:59,750 | INFO     | chi2: 7.341061990267235
[2025-11-26 20:38:34] 2025-11-27 01:37:59,752 | INFO     | sum of square deviations: 541183116990.481
[2025-11-26 20:38:34] 2025-11-27 01:37:59,794 | INFO     | sum of deviations: 2136755964482.6777
[2025-11-26 20:38:34] 2025-11-27 01:37:59,795 | INFO     | mean x: 1764170395.7350497
[2025-11-26 20:38:34] 2025-11-27 01:37:59,795 | INFO     | mean y: 2613814.9958471763
[2025-11-26 20:38:34] 2025-11-27 01:37:59,795 | INFO     | intersect: -6962868841.620246
[2025-11-26 20:38:34] 2025-11-27 01:37:59,797 | INFO     | chi2: 6.517140900336285
[2025-11-26 20:38:34] 2025-11-27 01:37:59,797 | INFO     | current chi2=6.517140900336285 (change=11.223459099287037 %)
[2025-11-26 20:38:34] 2025-11-27 01:37:59,797 | INFO     | right removable region: 1203
[2025-11-26 20:38:34] 2025-11-27 01:37:59,799 | INFO     | sum of square deviations: 541182209920.4807
[2025-11-26 20:38:34] 2025-11-27 01:37:59,843 | INFO     | sum of deviations: 1642692903935.6165
[2025-11-26 20:38:34] 2025-11-27 01:37:59,843 | INFO     | mean x: 1764170700.7350497
[2025-11-26 20:38:34] 2025-11-27 01:37:59,844 | INFO     | mean y: 2621438.506644518
[2025-11-26 20:38:34] 2025-11-27 01:37:59,844 | INFO     | intersect: -5352304570.340561
[2025-11-26 20:38:34] 2025-11-27 01:37:59,845 | INFO     | chi2: 3.507950565900434
[2025-11-26 20:38:34] 2025-11-27 01:37:59,846 | INFO     | current chi2=3.507950565900434 (change=52.21467179338265 %)
[2025-11-26 20:38:34] 2025-11-27 01:37:59,847 | INFO     | sum of square deviations: 534467413853.2558
[2025-11-26 20:38:34] 2025-11-27 01:37:59,885 | INFO     | sum of deviations: 1383631322849.9265
[2025-11-26 20:38:34] 2025-11-27 01:37:59,885 | INFO     | mean x: 1764170853.237698
[2025-11-26 20:38:34] 2025-11-27 01:37:59,885 | INFO     | mean y: 2627320.0458715595
[2025-11-26 20:38:34] 2025-11-27 01:37:59,885 | INFO     | intersect: -4564465056.644382
[2025-11-26 20:38:34] 2025-11-27 01:37:59,887 | INFO     | chi2: 2.1007482167507288
[2025-11-26 20:38:34] 2025-11-27 01:37:59,887 | INFO     | current chi2=2.1007482167507288 (change=40.11465733949131 %)
[2025-11-26 20:38:34] 2025-11-27 01:37:59,889 | INFO     | sum of square deviations: 527808239626.54846
[2025-11-26 20:38:34] 2025-11-27 01:37:59,925 | INFO     | sum of deviations: 1216077441457.0073
[2025-11-26 20:38:34] 2025-11-27 01:37:59,926 | INFO     | mean x: 1764171005.7420435
[2025-11-26 20:38:34] 2025-11-27 01:37:59,926 | INFO     | mean y: 2631156.448073702
[2025-11-26 20:38:34] 2025-11-27 01:37:59,926 | INFO     | intersect: -4062043098.1133523
[2025-11-26 20:38:34] 2025-11-27 01:37:59,928 | INFO     | chi2: 1.5546959303424548
[2025-11-26 20:38:34] 2025-11-27 01:37:59,928 | INFO     | current chi2=1.5546959303424548 (change=25.993228605609126 %)
[2025-11-26 20:38:34] 2025-11-27 01:37:59,932 | INFO     | sum of square deviations: 521204965984.24005
[2025-11-26 20:38:34] 2025-11-27 01:37:59,995 | INFO     | sum of deviations: 1076593105539.4487
[2025-11-26 20:38:34] 2025-11-27 01:37:59,995 | INFO     | mean x: 1764171158.2422204
[2025-11-26 20:38:34] 2025-11-27 01:37:59,996 | INFO     | mean y: 2634377.102607233
[2025-11-26 20:38:34] 2025-11-27 01:37:59,996 | INFO     | intersect: -3641410921.599609
[2025-11-26 20:38:34] 2025-11-27 01:38:00,041 | INFO     | chi2: 1.18848886347704
[2025-11-26 20:38:34] 2025-11-27 01:38:00,041 | INFO     | current chi2=1.18848886347704 (change=23.55489968927556 %)
[2025-11-26 20:38:34] 2025-11-27 01:38:00,041 | INFO     | left removable region: 40
[2025-11-26 20:38:34] 2025-11-27 01:38:00,043 | INFO     | sum of square deviations: 487753788630.0587
[2025-11-26 20:38:34] 2025-11-27 01:38:00,268 | INFO     | sum of deviations: 982135889497.8643
[2025-11-26 20:38:34] 2025-11-27 01:38:00,269 | INFO     | mean x: 1764171585.260533
[2025-11-26 20:38:34] 2025-11-27 01:38:00,269 | INFO     | mean y: 2640316.317282889
[2025-11-26 20:38:34] 2025-11-27 01:38:00,294 | INFO     | intersect: -3549676999.3168554
[2025-11-26 20:38:34] 2025-11-27 01:38:00,296 | INFO     | chi2: 0.1461515928277925
[2025-11-26 20:38:34] 2025-11-27 01:38:00,296 | INFO     | current memory leak: 2.01 B/s (using 1163 data points, chi2=0.15)
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | could have reported an average CPU frequency of 2600 MHz (44 samples)
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | ..............................
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . Timing measurements:
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . get job = 1 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . initial setup = 16 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . payload setup = 49 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . stage-in = 1 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . payload execution = 73787 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,311 | INFO     | . stage-out = 4 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,312 | INFO     | . log creation = 1 s
[2025-11-26 20:38:34] 2025-11-27 01:38:00,312 | INFO     | ..............................
[2025-11-26 20:38:34] 2025-11-27 01:38:01,067 | INFO     | 
[2025-11-26 20:38:34] 2025-11-27 01:38:01,067 | INFO     | job summary report
[2025-11-26 20:38:34] 2025-11-27 01:38:01,067 | INFO     | --------------------------------------------------
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | PanDA job id: 6894238251
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | task id: 47523675
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | errors: (none)
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | pilot state: finished 
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | transexitcode: 0
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | exeerrorcode: 0
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | exeerrordiag: 
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | exitcode: 0
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | exitmsg: OK
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | cpuconsumptiontime: 156068 s
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | nevents: 400
[2025-11-26 20:38:34] 2025-11-27 01:38:01,068 | INFO     | neventsw: 0
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | pid: 3030734
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | pgrp: 3030734
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | corecount: 9
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | event service: False
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | sizes: {0: 2283122, 2: 2283723, 3: 2283807, 4: 2283863, 6: 2284034, 8: 2284218, 21: 2284218, 33: 2284246, 45: 2284302, 58: 2284620, 70: 2284620, 73840: 2343058, 73
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | --------------------------------------------------
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | 
[2025-11-26 20:38:34] 2025-11-27 01:38:01,069 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 20:38:34] 2025-11-27 01:38:01,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:38:34] 2025-11-27 01:38:01,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:38:34] 2025-11-27 01:38:01,181 | INFO     | job 6894238251 has completed (purged errors)
[2025-11-26 20:38:34] 2025-11-27 01:38:01,182 | INFO     | overall cleanup function is called
[2025-11-26 20:38:34] 2025-11-27 01:38:02,196 | INFO     | --- collectZombieJob: --- 10, [3030734]
[2025-11-26 20:38:34] 2025-11-27 01:38:02,196 | INFO     | zombie collector waiting for pid 3030734
[2025-11-26 20:38:34] 2025-11-27 01:38:02,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:38:34] 2025-11-27 01:38:02,197 | INFO     | collected zombie processes
[2025-11-26 20:38:34] 2025-11-27 01:38:02,197 | INFO     | will attempt to kill all subprocesses of pid=3030734
[2025-11-26 20:38:34] 2025-11-27 01:38:02,844 | INFO     | process IDs to be killed: [3030734] (in reverse order)
[2025-11-26 20:38:34] 2025-11-27 01:38:03,170 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:38:34] 2025-11-27 01:38:03,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:38:34] 2025-11-27 01:38:03,200 | INFO     | did not find any defunct processes belonging to 3030734
[2025-11-26 20:38:34] 2025-11-27 01:38:03,224 | INFO     | did not find any defunct processes belonging to 3030734
[2025-11-26 20:38:34] 2025-11-27 01:38:03,234 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:38:34] 2025-11-27 01:38:03,235 | INFO     | ready for new job
[2025-11-26 20:38:34] 2025-11-27 01:38:03,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:38:34] 2025-11-27 01:38:03,253 | INFO     | ***************************************
[2025-11-26 20:38:34] 2025-11-27 01:38:03,254 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:38:34] 2025-11-27 01:38:03,254 | INFO     | ***************************************
[2025-11-26 20:38:34] 2025-11-27 01:38:03,254 | INFO     | 
[2025-11-26 20:38:34] 2025-11-27 01:38:03,264 | INFO     | architecture information:
[2025-11-26 20:38:34] 2025-11-27 01:38:03,270 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:38:34] 2025-11-27 01:38:03,394 | INFO     | cat /etc/os-release:
[2025-11-26 20:38:34] NAME="CentOS Linux"
[2025-11-26 20:38:34] VERSION="7 (Core)"
[2025-11-26 20:38:34] ID="centos"
[2025-11-26 20:38:34] ID_LIKE="rhel fedora"
[2025-11-26 20:38:34] VERSION_ID="7"
[2025-11-26 20:38:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:38:34] ANSI_COLOR="0;31"
[2025-11-26 20:38:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:38:34] HOME_URL="https://www.centos.org/"
[2025-11-26 20:38:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:38:34] 
[2025-11-26 20:38:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:38:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:38:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:38:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:38:34] 
[2025-11-26 20:38:34] 2025-11-27 01:38:03,395 | INFO     | ***************************************
[2025-11-26 20:38:34] 2025-11-27 01:38:03,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 20:38:34] 2025-11-27 01:38:04,098 | INFO     | sufficient remaining disk space (52065992704 B)
[2025-11-26 20:38:34] 2025-11-27 01:38:04,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:38:34] 2025-11-27 01:38:04,098 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:38:34] 2025-11-27 01:38:04,098 | INFO     | update_server=False
[2025-11-26 20:38:34] 2025-11-27 01:38:04,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:38:34] 2025-11-27 01:38:04,265 | INFO     | all data control threads have been joined
[2025-11-26 20:38:34] 2025-11-27 01:38:04,370 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 20:38:34] 2025-11-27 01:38:04,371 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 20:38:34] 2025-11-27 01:38:04,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:38:34] 2025-11-27 01:38:04,371 | INFO     | will abort loop
[2025-11-26 20:38:34] 2025-11-27 01:38:04,919 | INFO     | all job control threads have been joined
[2025-11-26 20:38:34] 2025-11-27 01:38:05,080 | INFO     | all payload control threads have been joined
[2025-11-26 20:38:34] 2025-11-27 01:38:05,104 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,161 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,162 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,272 | INFO     | [data] control thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:38:34] 2025-11-27 01:38:05,293 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,377 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:38:34] 2025-11-27 01:38:05,768 | INFO     | [job] validate thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,927 | INFO     | [job] control thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:05,990 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:06,086 | INFO     | [payload] control thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:06,180 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:06,212 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:06,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:38:34] 2025-11-27 01:38:06,593 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:07,286 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:10,424 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:38:34] 2025-11-27 01:38:18,291 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:38:34] 2025-11-27 01:38:19,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518154073920)>', '<ExcThread(monitor, started 140517295777536)>']
[2025-11-26 20:38:34] 2025-11-27 01:38:24,527 | INFO     | all workflow threads have been joined
[2025-11-26 20:38:34] 2025-11-27 01:38:24,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:38:34] 2025-11-27 01:38:24,528 | INFO     | traces error code: 0
[2025-11-26 20:38:34] 2025-11-27 01:38:24,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:38:34] 2025-11-27 01:38:33,089 | INFO     | PID=3015436 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:38:34] 2025-11-27 01:38:33,089 | INFO     | .. there are 7 such processes running
[2025-11-26 20:38:34] 2025-11-27 01:38:33,089 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:38:34] 2025-11-27 01:38:33,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:38:34] 2025-11-27 01:38:33,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:38:34] 2025-11-27 01:38:33,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:38:34] 2025-11-27 01:38:33,090 | INFO     | [monitor] control thread has ended
[2025-11-26 20:38:34] 2025-11-27 01:38:33,368 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:38:34] 2025-11-27 01:38:33,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:38:34] 2025-11-27 01:38:33,441 [wrapper] pilotpid: 3015436
[2025-11-26 20:38:34] 2025-11-27 01:38:33,483 [wrapper] Pilot exit status: 0
[2025-11-26 20:38:34] 2025-11-27 01:38:33,605 [wrapper] pandaids: 6894238251
[2025-11-26 20:38:34] 2025-11-27 01:38:33,869 [wrapper] cleanup supervisor_pilot  556369 3015437
[2025-11-26 20:38:34] 2025-11-27 01:38:33,887 [wrapper] Test setup, not cleaning
[2025-11-26 20:38:34] 2025-11-27 01:38:33,893 [wrapper] apfmon messages muted
[2025-11-26 20:38:34] 2025-11-27 01:38:33,898 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:38:34] 2025-11-27 01:38:33,904 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:38:34]  *** Error codes and diagnostics ***
[2025-11-26 20:38:34]     "exeErrorCode": 0,
[2025-11-26 20:38:34]     "exeErrorDiag": "",
[2025-11-26 20:38:34]     "pilotErrorCode": 0,
[2025-11-26 20:38:34]     "pilotErrorDiag": "",
[2025-11-26 20:38:34]  *** Listing of results directory ***
[2025-11-26 20:38:34] total 632268
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 20:38:34] -rwx------. 1 boincer umatlas     36292 Nov 24 14:57 runpilot2-wrapper.sh
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:57 queuedata.json
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:38:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:02 run_atlas
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:02 job.xml
[2025-11-26 20:38:34] -rw-r--r--. 2 boincer umatlas 281027544 Nov 26 00:02 EVNT.47523673._000002.pool.root.1
[2025-11-26 20:38:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:02 start_atlas.sh
[2025-11-26 20:38:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:02 shared
[2025-11-26 20:38:34] -rw-r--r--. 2 boincer umatlas    589937 Nov 26 00:02 input.tar.gz
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:02 boinc_lockfile
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas      2613 Nov 26 00:02 pandaJob.out
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas        57 Nov 26 00:02 setup.sh.local
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-26 20:38:34] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas      6659 Nov 26 20:36 init_data.xml
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas 341603354 Nov 26 20:36 HITS.47523675._000031.pool.root.1
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas       532 Nov 26 20:36 boinc_task_state.xml
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas      1043 Nov 26 20:37 memory_monitor_summary.json
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas   1233449 Nov 26 20:37 log.47523675._000031.job.log.tgz.1
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas        95 Nov 26 20:37 pilot_heartbeat.json
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas      7825 Nov 26 20:38 heartbeat.json
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:38 wrapper_checkpoint.txt
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas       822 Nov 26 20:38 pilotlog.txt
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:38 boinc_mmap_file
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas   9213603 Nov 26 20:38 log.47523675._000031.job.log.1
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas       357 Nov 26 20:38 output.list
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:38 runtime_log
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas  10465280 Nov 26 20:38 result.tar.gz
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas       659 Nov 26 20:38 wYUNDm3rrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwtLKDmGLV8Xo.diag
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 20:38 runtime_log.err
[2025-11-26 20:38:34] -rw-r--r--. 1 boincer umatlas     21192 Nov 26 20:38 stderr.txt
[2025-11-26 20:38:34] HITS file was successfully produced:
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas 341603354 Nov 26 20:36 shared/HITS.pool.root.1
[2025-11-26 20:38:34]  *** Contents of shared directory: ***
[2025-11-26 20:38:34] total 618868
[2025-11-26 20:38:34] -rw-r--r--. 2 boincer umatlas 281027544 Nov 26 00:02 ATLAS.root_0
[2025-11-26 20:38:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:02 start_atlas.sh
[2025-11-26 20:38:34] -rw-r--r--. 2 boincer umatlas    589937 Nov 26 00:02 input.tar.gz
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas 341603354 Nov 26 20:36 HITS.pool.root.1
[2025-11-26 20:38:34] -rw-------. 1 boincer umatlas  10465280 Nov 26 20:38 result.tar.gz
20:38:35 (3008075): run_atlas exited; CPU time 158231.199787
20:38:35 (3008075): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN