Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:38:58 (1482566): wrapper (7.7.26015): starting
09:38:58 (1482566): wrapper: running run_atlas (--nthreads 11)
[2025-11-26 09:38:58] Arguments: --nthreads 11
[2025-11-26 09:38:58] Threads: 11
[2025-11-26 09:38:58] Checking for CVMFS
[2025-11-26 09:38:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:38:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:38:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:38:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:38:58] 2.13.3.0 11322 30180 238804 153324 1 283 26410841 32935937 20231 16776704 0 52244361 99.587 54243361 39754 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 09:38:58] CVMFS is ok
[2025-11-26 09:38:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:38:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:38:58] Further information can be found at the LHC@home message board.
[2025-11-26 09:38:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:38:58] Checking for apptainer binary...
[2025-11-26 09:38:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:38:58] Running /usr/bin/apptainer --version
[2025-11-26 09:38:58] apptainer version 1.4.4-1.el9
[2025-11-26 09:38:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:38:58] c6-1-26-4.aglt2.org
[2025-11-26 09:38:58] apptainer works
[2025-11-26 09:38:58] Set ATHENA_PROC_NUMBER=11
[2025-11-26 09:38:58] Set ATHENA_CORE_NUMBER=11
[2025-11-26 09:38:59] Starting ATLAS job with PandaID=6891104776
[2025-11-26 09:38:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:02:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:02:49] 2025-11-27 05:49:36,362 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:02:49] 2025-11-27 05:49:36,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:02:49] 2025-11-27 05:49:36,392 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:02:49] 2025-11-27 05:49:36,393 | INFO     | sum of square deviations: 222294789562.0961
[2025-11-27 01:02:49] 2025-11-27 05:49:36,414 | INFO     | sum of deviations: 1502330222815.2869
[2025-11-27 01:02:49] 2025-11-27 05:49:36,415 | INFO     | mean x: 1764195246.6625698
[2025-11-27 01:02:49] 2025-11-27 05:49:36,415 | INFO     | mean y: 3388798.441340782
[2025-11-27 01:02:49] 2025-11-27 05:49:36,415 | INFO     | intersect: -11919535005.70784
[2025-11-27 01:02:49] 2025-11-27 05:49:36,416 | INFO     | chi2: 10.505960057232153
[2025-11-27 01:02:49] 2025-11-27 05:49:36,417 | INFO     | sum of square deviations: 218590252990.69778
[2025-11-27 01:02:49] 2025-11-27 05:49:36,442 | INFO     | sum of deviations: 1878453571449.1553
[2025-11-27 01:02:49] 2025-11-27 05:49:36,442 | INFO     | mean x: 1764195094.17191
[2025-11-27 01:02:49] 2025-11-27 05:49:36,446 | INFO     | mean y: 3404280.574157303
[2025-11-27 01:02:49] 2025-11-27 05:49:36,446 | INFO     | intersect: -15157191995.05818
[2025-11-27 01:02:49] 2025-11-27 05:49:36,447 | INFO     | chi2: 6.857348054252186
[2025-11-27 01:02:49] 2025-11-27 05:49:36,447 | INFO     | current chi2=6.857348054252186 (change=34.72897272694574 %)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,448 | INFO     | sum of square deviations: 214926895869.57516
[2025-11-27 01:02:49] 2025-11-27 05:49:36,473 | INFO     | sum of deviations: 2167742083644.1152
[2025-11-27 01:02:49] 2025-11-27 05:49:36,473 | INFO     | mean x: 1764194941.6768363
[2025-11-27 01:02:49] 2025-11-27 05:49:36,473 | INFO     | mean y: 3416314.5423728814
[2025-11-27 01:02:49] 2025-11-27 05:49:36,473 | INFO     | intersect: -17790166956.42097
[2025-11-27 01:02:49] 2025-11-27 05:49:36,478 | INFO     | chi2: 4.506690129534977
[2025-11-27 01:02:49] 2025-11-27 05:49:36,479 | INFO     | current chi2=4.506690129534977 (change=34.279402272130326 %)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,480 | INFO     | sum of square deviations: 211304809434.17743
[2025-11-27 01:02:49] 2025-11-27 05:49:36,504 | INFO     | sum of deviations: 2392286422890.988
[2025-11-27 01:02:49] 2025-11-27 05:49:36,504 | INFO     | mean x: 1764194789.1840909
[2025-11-27 01:02:49] 2025-11-27 05:49:36,505 | INFO     | mean y: 3425768.1420454546
[2025-11-27 01:02:49] 2025-11-27 05:49:36,505 | INFO     | intersect: -19969897379.59646
[2025-11-27 01:02:49] 2025-11-27 05:49:36,506 | INFO     | chi2: 3.0910219075227867
[2025-11-27 01:02:49] 2025-11-27 05:49:36,506 | INFO     | current chi2=3.0910219075227867 (change=31.41259286354055 %)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,511 | INFO     | sum of square deviations: 207723601053.06787
[2025-11-27 01:02:49] 2025-11-27 05:49:36,535 | INFO     | sum of deviations: 2528675945789.9507
[2025-11-27 01:02:49] 2025-11-27 05:49:36,535 | INFO     | mean x: 1764194636.6902857
[2025-11-27 01:02:49] 2025-11-27 05:49:36,535 | INFO     | mean y: 3431565.889142857
[2025-11-27 01:02:49] 2025-11-27 05:49:36,535 | INFO     | intersect: -21472590026.62446
[2025-11-27 01:02:49] 2025-11-27 05:49:36,536 | INFO     | chi2: 2.3399570252015938
[2025-11-27 01:02:49] 2025-11-27 05:49:36,536 | INFO     | current chi2=2.3399570252015938 (change=24.298271082883165 %)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,536 | INFO     | right removable region: 874
[2025-11-27 01:02:49] 2025-11-27 05:49:36,541 | INFO     | sum of square deviations: 218589454139.38065
[2025-11-27 01:02:49] 2025-11-27 05:49:36,562 | INFO     | sum of deviations: 1229961457258.2832
[2025-11-27 01:02:49] 2025-11-27 05:49:36,562 | INFO     | mean x: 1764195399.169663
[2025-11-27 01:02:49] 2025-11-27 05:49:36,562 | INFO     | mean y: 3399991.45505618
[2025-11-27 01:02:49] 2025-11-27 05:49:36,563 | INFO     | intersect: -9923393378.308678
[2025-11-27 01:02:49] 2025-11-27 05:49:36,568 | INFO     | chi2: 8.493299799733098
[2025-11-27 01:02:49] 2025-11-27 05:49:36,568 | INFO     | current chi2=8.493299799733098 (change=19.157318765109608 %)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,568 | INFO     | left removable region: 10
[2025-11-27 01:02:49] 2025-11-27 05:49:36,569 | INFO     | sum of square deviations: 199986845805.94305
[2025-11-27 01:02:49] 2025-11-27 05:49:36,593 | INFO     | sum of deviations: 2166757858076.423
[2025-11-27 01:02:49] 2025-11-27 05:49:36,593 | INFO     | mean x: 1764194911.195602
[2025-11-27 01:02:49] 2025-11-27 05:49:36,593 | INFO     | mean y: 3447964.796296296
[2025-11-27 01:02:49] 2025-11-27 05:49:36,593 | INFO     | intersect: -19110725127.971745
[2025-11-27 01:02:49] 2025-11-27 05:49:36,594 | INFO     | chi2: 0.14465133301561628
[2025-11-27 01:02:49] 2025-11-27 05:49:36,594 | INFO     | current memory leak: 10.83 B/s (using 864 data points, chi2=0.14)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,599 | INFO     | could have reported an average CPU frequency of 2947 MHz (33 samples)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | ..............................
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . Timing measurements:
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . get job = 0 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . initial setup = 2 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . payload setup = 6 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . stage-in = 0 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . payload execution = 54562 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . stage-out = 5 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | . log creation = 1 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,600 | INFO     | ..............................
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | 
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | job summary report
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | --------------------------------------------------
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | PanDA job id: 6891104776
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | task id: 47483661
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | errors: (none)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | pilot state: finished 
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | transexitcode: 0
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | exeerrorcode: 0
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | exeerrordiag: 
[2025-11-27 01:02:49] 2025-11-27 05:49:36,802 | INFO     | exitcode: 0
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | exitmsg: OK
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | cpuconsumptiontime: 242887 s
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | nevents: 1000
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | neventsw: 0
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | pid: 1494264
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | pgrp: 1494264
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | corecount: 11
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | event service: False
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | sizes: {0: 2284304, 1: 2284304, 5: 2284594, 11: 2284650, 54572: 2335692, 54573: 2335691, 54580: 2344869, 54583: 2344925, 54610: 2345235}
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | --------------------------------------------------
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | 
[2025-11-27 01:02:49] 2025-11-27 05:49:36,803 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 01:02:49] 2025-11-27 05:49:36,865 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,867 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:02:49] 2025-11-27 05:49:36,867 | INFO     | job 6891104776 has completed (purged errors)
[2025-11-27 01:02:49] 2025-11-27 05:49:36,867 | INFO     | overall cleanup function is called
[2025-11-27 01:02:49] 2025-11-27 05:49:37,914 | INFO     | --- collectZombieJob: --- 10, [1494264]
[2025-11-27 01:02:49] 2025-11-27 05:49:37,914 | INFO     | zombie collector waiting for pid 1494264
[2025-11-27 01:02:49] 2025-11-27 05:49:37,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:02:49] 2025-11-27 05:49:37,914 | INFO     | collected zombie processes
[2025-11-27 01:02:49] 2025-11-27 05:49:37,915 | INFO     | will attempt to kill all subprocesses of pid=1494264
[2025-11-27 01:02:49] 2025-11-27 05:49:38,699 | INFO     | process IDs to be killed: [1494264] (in reverse order)
[2025-11-27 01:02:49] 2025-11-27 05:49:39,191 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:02:49] 2025-11-27 05:49:39,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:02:49] 2025-11-27 05:49:39,215 | INFO     | did not find any defunct processes belonging to 1494264
[2025-11-27 01:02:49] 2025-11-27 05:49:39,246 | INFO     | did not find any defunct processes belonging to 1494264
[2025-11-27 01:02:49] 2025-11-27 05:49:39,251 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:02:49] 2025-11-27 05:49:39,251 | INFO     | ready for new job
[2025-11-27 01:02:49] 2025-11-27 05:49:39,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:02:49] 2025-11-27 05:49:39,259 | INFO     | ***************************************
[2025-11-27 01:02:49] 2025-11-27 05:49:39,260 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:02:49] 2025-11-27 05:49:39,260 | INFO     | ***************************************
[2025-11-27 01:02:49] 2025-11-27 05:49:39,260 | INFO     | 
[2025-11-27 01:02:49] 2025-11-27 05:49:39,263 | INFO     | architecture information:
[2025-11-27 01:02:49] 2025-11-27 05:49:39,263 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:02:49] 2025-11-27 05:49:39,309 | INFO     | cat /etc/os-release:
[2025-11-27 01:02:49] NAME="CentOS Linux"
[2025-11-27 01:02:49] VERSION="7 (Core)"
[2025-11-27 01:02:49] ID="centos"
[2025-11-27 01:02:49] ID_LIKE="rhel fedora"
[2025-11-27 01:02:49] VERSION_ID="7"
[2025-11-27 01:02:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:02:49] ANSI_COLOR="0;31"
[2025-11-27 01:02:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:02:49] HOME_URL="https://www.centos.org/"
[2025-11-27 01:02:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:02:49] 
[2025-11-27 01:02:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:02:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:02:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:02:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:02:49] 
[2025-11-27 01:02:49] 2025-11-27 05:49:39,310 | INFO     | ***************************************
[2025-11-27 01:02:49] 2025-11-27 05:49:39,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 01:02:49] 2025-11-27 05:49:39,923 | INFO     | sufficient remaining disk space (70776782848 B)
[2025-11-27 01:02:49] 2025-11-27 05:49:39,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:02:49] 2025-11-27 05:49:39,926 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:02:49] 2025-11-27 05:49:39,926 | INFO     | update_server=False
[2025-11-27 01:02:49] 2025-11-27 05:49:39,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:02:49] 2025-11-27 05:49:39,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:02:49] 2025-11-27 05:49:39,926 | INFO     | aborting loop
[2025-11-27 01:02:49] 2025-11-27 05:49:40,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:02:49] 2025-11-27 05:49:40,507 | INFO     | all data control threads have been joined
[2025-11-27 01:02:49] 2025-11-27 05:49:40,930 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:40,932 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,063 | INFO     | all payload control threads have been joined
[2025-11-27 01:02:49] 2025-11-27 05:49:41,164 | INFO     | all job control threads have been joined
[2025-11-27 01:02:49] 2025-11-27 05:49:41,277 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,405 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,425 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,433 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,447 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,448 | INFO     | [job] validate thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,513 | INFO     | [data] control thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,668 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:41,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:02:49] 2025-11-27 05:49:42,069 | INFO     | [payload] control thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:42,170 | INFO     | [job] control thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:42,453 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:42,824 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:43,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:02:49] 2025-11-27 05:49:45,336 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:02:49] 2025-11-27 05:49:47,171 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:02:49] 2025-11-27 05:49:49,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706262751040)>', '<ExcThread(monitor, started 140705544533760)>']
[2025-11-27 01:02:49] 2025-11-27 05:49:54,101 | INFO     | all workflow threads have been joined
[2025-11-27 01:02:49] 2025-11-27 05:49:54,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:02:49] 2025-11-27 05:49:54,102 | INFO     | traces error code: 0
[2025-11-27 01:02:49] 2025-11-27 05:49:54,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:02:49] 2025-11-27 05:50:09,170 | INFO     | PID=1486541 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 01:02:49] 2025-11-27 05:50:09,170 | INFO     | .. there are 32 such processes running
[2025-11-27 01:02:49] 2025-11-27 05:50:09,171 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:02:49] 2025-11-27 05:50:09,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:02:49] 2025-11-27 05:50:09,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:02:49] 2025-11-27 05:50:09,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:02:49] 2025-11-27 05:50:09,171 | INFO     | [monitor] control thread has ended
[2025-11-27 01:02:49] 2025-11-27 05:50:09,351 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:02:49] 2025-11-27 05:50:09,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:02:49] 2025-11-27 05:50:09,401 [wrapper] pilotpid: 1486541
[2025-11-27 01:02:49] 2025-11-27 05:50:09,408 [wrapper] Pilot exit status: 0
[2025-11-27 01:02:49] 2025-11-27 05:50:09,453 [wrapper] pandaids: 6891104776
[2025-11-27 01:02:49] 2025-11-27 05:50:09,728 [wrapper] cleanup supervisor_pilot  391179 1486542
[2025-11-27 01:02:49] 2025-11-27 05:50:09,743 [wrapper] Test setup, not cleaning
[2025-11-27 01:02:49] 2025-11-27 05:50:09,763 [wrapper] apfmon messages muted
[2025-11-27 01:02:49] 2025-11-27 05:50:09,774 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:02:49] 2025-11-27 05:50:09,790 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:02:49]  *** Error codes and diagnostics ***
[2025-11-27 01:02:49]     "exeErrorCode": 0,
[2025-11-27 01:02:49]     "exeErrorDiag": "",
[2025-11-27 01:02:49]     "pilotErrorCode": 0,
[2025-11-27 01:02:49]     "pilotErrorDiag": "",
[2025-11-27 01:02:49]  *** Listing of results directory ***
[2025-11-27 01:02:49] total 1325060
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:57 queuedata.json
[2025-11-27 01:02:49] -rwx------. 1 boincer umatlas     36292 Nov 18 01:58 runpilot2-wrapper.sh
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:02:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:38 run_atlas
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:38 job.xml
[2025-11-27 01:02:49] -rw-r--r--. 2 boincer umatlas 410970329 Nov 26 09:38 EVNT.47483658._000226.pool.root.1
[2025-11-27 01:02:49] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 09:38 start_atlas.sh
[2025-11-27 01:02:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:38 shared
[2025-11-27 01:02:49] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 09:38 input.tar.gz
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:38 boinc_lockfile
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 09:38 pandaJob.out
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas    992360 Nov 26 09:39 agis_schedconf.cvmfs.json
[2025-11-27 01:02:49] drwx------. 5 boincer umatlas      4096 Nov 26 09:39 pilot3
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas       533 Nov 27 00:24 boinc_task_state.xml
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas 922681564 Nov 27 00:48 HITS.47483661._001959.pool.root.1
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas      1061 Nov 27 00:48 memory_monitor_summary.json
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas   1516240 Nov 27 00:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas   2414785 Nov 27 00:49 log.47483661._001959.job.log.tgz.1
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas        95 Nov 27 00:49 pilot_heartbeat.json
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas      8639 Nov 27 00:49 heartbeat.json
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas       823 Nov 27 00:50 pilotlog.txt
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas   7234313 Nov 27 00:50 log.47483661._001959.job.log.1
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas       353 Nov 27 00:50 output.list
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas       620 Nov 27 00:50 runtime_log
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas   9666560 Nov 27 00:50 result.tar.gz
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas       663 Nov 27 00:50 SLGODmRqUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDm66qMDmbnVx1n.diag
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas      8711 Nov 27 00:50 runtime_log.err
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas      6846 Nov 27 01:02 init_data.xml
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 01:02 boinc_mmap_file
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas        29 Nov 27 01:02 wrapper_checkpoint.txt
[2025-11-27 01:02:49] -rw-r--r--. 1 boincer umatlas     21155 Nov 27 01:02 stderr.txt
[2025-11-27 01:02:49] HITS file was successfully produced:
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas 922681564 Nov 27 00:48 shared/HITS.pool.root.1
[2025-11-27 01:02:49]  *** Contents of shared directory: ***
[2025-11-27 01:02:49] total 1312440
[2025-11-27 01:02:49] -rw-r--r--. 2 boincer umatlas 410970329 Nov 26 09:38 ATLAS.root_0
[2025-11-27 01:02:49] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 09:38 start_atlas.sh
[2025-11-27 01:02:49] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 09:38 input.tar.gz
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas 922681564 Nov 27 00:48 HITS.pool.root.1
[2025-11-27 01:02:49] -rw-------. 1 boincer umatlas   9666560 Nov 27 00:50 result.tar.gz
01:02:51 (1482566): run_atlas exited; CPU time 243842.477179
01:02:51 (1482566): called boinc_finish(0)

</stderr_txt>
]]>

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