Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:11 (1716393): wrapper (7.7.26015): starting
00:02:11 (1716393): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:02:11] Arguments: --nthreads 9
[2025-11-26 00:02:11] Threads: 9
[2025-11-26 00:02:11] Checking for CVMFS
[2025-11-26 00:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:02:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:02:13] 2.13.3.0 13122 29605 367576 153309 3 353 29296418 32935937 43009 16776704 0 147375708 99.572 163017396 36137 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:02:13] CVMFS is ok
[2025-11-26 00:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:02:13] Further information can be found at the LHC@home message board.
[2025-11-26 00:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:02:13] Checking for apptainer binary...
[2025-11-26 00:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:02:13] Running /usr/bin/apptainer --version
[2025-11-26 00:02:13] apptainer version 1.4.4-1.el9
[2025-11-26 00:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:02:14] c6-8-25-2.aglt2.org
[2025-11-26 00:02:14] apptainer works
[2025-11-26 00:02:14] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:02:14] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:02:14] Starting ATLAS job with PandaID=6891568651
[2025-11-26 00:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:00:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:00:31] 2025-11-27 09:59:54,089 | INFO     | monitor loop #5437: job 0:6891568651 is in state 'finished'
[2025-11-27 05:00:31] 2025-11-27 09:59:54,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:00:31] 2025-11-27 09:59:55,516 | INFO     | time since job start (104206s) is within the limit (172800.0s)
[2025-11-27 05:00:31] 2025-11-27 09:59:55,638 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 05:00:31] 2025-11-27 09:59:55,658 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2687.579739583334
[2025-11-27 05:00:31] 2025-11-27 09:59:55,689 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891568651/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:00:31] 2025-11-27 09:59:55,703 | INFO     | extracted standard info from prmon json
[2025-11-27 05:00:31] 2025-11-27 09:59:55,704 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:00:31] 2025-11-27 09:59:55,704 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:00:31] 2025-11-27 09:59:55,827 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:00:31] 2025-11-27 09:59:55,852 | INFO     | sum of square deviations: 1539590456922.5117
[2025-11-27 05:00:31] 2025-11-27 09:59:55,925 | INFO     | sum of deviations: 8536906022776.844
[2025-11-27 05:00:31] 2025-11-27 09:59:55,926 | INFO     | mean x: 1764185526.0820632
[2025-11-27 05:00:31] 2025-11-27 09:59:55,926 | INFO     | mean y: 3056161.57971864
[2025-11-27 05:00:31] 2025-11-27 09:59:55,926 | INFO     | intersect: -9779211567.59971
[2025-11-27 05:00:31] 2025-11-27 09:59:55,928 | INFO     | chi2: 13.213531000472091
[2025-11-27 05:00:31] 2025-11-27 09:59:55,931 | INFO     | sum of square deviations: 1526093752612.4583
[2025-11-27 05:00:31] 2025-11-27 09:59:55,996 | INFO     | sum of deviations: 9140785391680.477
[2025-11-27 05:00:31] 2025-11-27 09:59:55,997 | INFO     | mean x: 1764185373.5867138
[2025-11-27 05:00:31] 2025-11-27 09:59:55,997 | INFO     | mean y: 3062983.8883009995
[2025-11-27 05:00:31] 2025-11-27 09:59:55,997 | INFO     | intersect: -10563810685.237387
[2025-11-27 05:00:31] 2025-11-27 09:59:55,999 | INFO     | chi2: 10.099736497274403
[2025-11-27 05:00:31] 2025-11-27 09:59:56,000 | INFO     | current chi2=10.099736497274403 (change=23.565196184777854 %)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,000 | INFO     | right removable region: 1700
[2025-11-27 05:00:31] 2025-11-27 09:59:56,002 | INFO     | sum of square deviations: 1526092106222.4592
[2025-11-27 05:00:31] 2025-11-27 09:59:56,067 | INFO     | sum of deviations: 7817299165876.332
[2025-11-27 05:00:31] 2025-11-27 09:59:56,068 | INFO     | mean x: 1764185678.5867138
[2025-11-27 05:00:31] 2025-11-27 09:59:56,068 | INFO     | mean y: 3064291.014697237
[2025-11-27 05:00:31] 2025-11-27 09:59:56,068 | INFO     | intersect: -9033852404.534044
[2025-11-27 05:00:31] 2025-11-27 09:59:56,070 | INFO     | chi2: 9.147093701457488
[2025-11-27 05:00:31] 2025-11-27 09:59:56,071 | INFO     | current chi2=9.147093701457488 (change=30.774796675236303 %)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,073 | INFO     | sum of square deviations: 1512672976804.0159
[2025-11-27 05:00:31] 2025-11-27 09:59:56,168 | INFO     | sum of deviations: 7255608385355.062
[2025-11-27 05:00:31] 2025-11-27 09:59:56,169 | INFO     | mean x: 1764185831.090802
[2025-11-27 05:00:31] 2025-11-27 09:59:56,169 | INFO     | mean y: 3070672.941037736
[2025-11-27 05:00:31] 2025-11-27 09:59:56,169 | INFO     | intersect: -8458931164.648099
[2025-11-27 05:00:31] 2025-11-27 09:59:56,171 | INFO     | chi2: 6.795576675369732
[2025-11-27 05:00:31] 2025-11-27 09:59:56,171 | INFO     | current chi2=6.795576675369732 (change=25.707805154691567 %)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,173 | INFO     | sum of square deviations: 1499332939499.8916
[2025-11-27 05:00:31] 2025-11-27 09:59:56,223 | INFO     | sum of deviations: 6959662626851.139
[2025-11-27 05:00:31] 2025-11-27 09:59:56,223 | INFO     | mean x: 1764185983.5937314
[2025-11-27 05:00:31] 2025-11-27 09:59:56,224 | INFO     | mean y: 3074054.087522176
[2025-11-27 05:00:31] 2025-11-27 09:59:56,224 | INFO     | intersect: -8185993852.956079
[2025-11-27 05:00:31] 2025-11-27 09:59:56,225 | INFO     | chi2: 6.154656100244007
[2025-11-27 05:00:31] 2025-11-27 09:59:56,226 | INFO     | current chi2=6.154656100244007 (change=9.431437621014762 %)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,226 | INFO     | left removable region: 30
[2025-11-27 05:00:31] 2025-11-27 09:59:56,228 | INFO     | sum of square deviations: 1444164819175.8618
[2025-11-27 05:00:31] 2025-11-27 09:59:56,276 | INFO     | sum of deviations: 7239143854347.943
[2025-11-27 05:00:31] 2025-11-27 09:59:56,277 | INFO     | mean x: 1764186258.0952096
[2025-11-27 05:00:31] 2025-11-27 09:59:56,277 | INFO     | mean y: 3087855.905988024
[2025-11-27 05:00:31] 2025-11-27 09:59:56,277 | INFO     | intersect: -8840222781.935986
[2025-11-27 05:00:31] 2025-11-27 09:59:56,278 | INFO     | chi2: 2.045750378679632
[2025-11-27 05:00:31] 2025-11-27 09:59:56,279 | INFO     | current memory leak: 5.01 B/s (using 1670 data points, chi2=2.05)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | could have reported an average CPU frequency of 2681 MHz (60 samples)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | ..............................
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . Timing measurements:
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . get job = 0 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . initial setup = 4 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . payload setup = 42 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . stage-in = 0 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . payload execution = 104060 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . stage-out = 7 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | . log creation = 2 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,281 | INFO     | ..............................
[2025-11-27 05:00:31] 2025-11-27 09:59:56,928 | INFO     | 
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | job summary report
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | --------------------------------------------------
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | PanDA job id: 6891568651
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | task id: 47493068
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | errors: (none)
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | pilot state: finished 
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | transexitcode: 0
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | exeerrorcode: 0
[2025-11-27 05:00:31] 2025-11-27 09:59:56,929 | INFO     | exeerrordiag: 
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | exitcode: 0
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | exitmsg: OK
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | cpuconsumptiontime: 272005 s
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | nevents: 1000
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | neventsw: 0
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | pid: 1746894
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | pgrp: 1746894
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | corecount: 9
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | event service: False
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | sizes: {0: 2283476, 1: 2284161, 2: 2284360, 3: 2284360, 14: 2284388, 24: 2284416, 28: 2284834, 35: 2284862, 104107: 2355714, 104116: 2364736, 104120: 2364792, 1041
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | --------------------------------------------------
[2025-11-27 05:00:31] 2025-11-27 09:59:56,930 | INFO     | 
[2025-11-27 05:00:31] 2025-11-27 09:59:56,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 05:00:31] 2025-11-27 09:59:57,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:00:31] 2025-11-27 09:59:57,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:00:31] 2025-11-27 09:59:57,054 | INFO     | job 6891568651 has completed (purged errors)
[2025-11-27 05:00:31] 2025-11-27 09:59:57,054 | INFO     | overall cleanup function is called
[2025-11-27 05:00:31] 2025-11-27 09:59:58,078 | INFO     | --- collectZombieJob: --- 10, [1746894]
[2025-11-27 05:00:31] 2025-11-27 09:59:58,079 | INFO     | zombie collector waiting for pid 1746894
[2025-11-27 05:00:31] 2025-11-27 09:59:58,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:00:31] 2025-11-27 09:59:58,079 | INFO     | collected zombie processes
[2025-11-27 05:00:31] 2025-11-27 09:59:58,079 | INFO     | will attempt to kill all subprocesses of pid=1746894
[2025-11-27 05:00:31] 2025-11-27 09:59:58,765 | INFO     | process IDs to be killed: [1746894] (in reverse order)
[2025-11-27 05:00:31] 2025-11-27 09:59:58,954 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:00:31] 2025-11-27 09:59:58,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:00:31] 2025-11-27 09:59:59,121 | INFO     | did not find any defunct processes belonging to 1746894
[2025-11-27 05:00:31] 2025-11-27 09:59:59,214 | INFO     | did not find any defunct processes belonging to 1746894
[2025-11-27 05:00:31] 2025-11-27 09:59:59,237 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:00:31] 2025-11-27 09:59:59,237 | INFO     | ready for new job
[2025-11-27 05:00:31] 2025-11-27 09:59:59,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:00:31] 2025-11-27 09:59:59,284 | INFO     | ***************************************
[2025-11-27 05:00:31] 2025-11-27 09:59:59,284 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:00:31] 2025-11-27 09:59:59,284 | INFO     | ***************************************
[2025-11-27 05:00:31] 2025-11-27 09:59:59,284 | INFO     | 
[2025-11-27 05:00:31] 2025-11-27 09:59:59,311 | INFO     | architecture information:
[2025-11-27 05:00:31] 2025-11-27 09:59:59,329 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:00:31] 2025-11-27 09:59:59,423 | INFO     | cat /etc/os-release:
[2025-11-27 05:00:31] NAME="CentOS Linux"
[2025-11-27 05:00:31] VERSION="7 (Core)"
[2025-11-27 05:00:31] ID="centos"
[2025-11-27 05:00:31] ID_LIKE="rhel fedora"
[2025-11-27 05:00:31] VERSION_ID="7"
[2025-11-27 05:00:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:00:31] ANSI_COLOR="0;31"
[2025-11-27 05:00:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:00:31] HOME_URL="https://www.centos.org/"
[2025-11-27 05:00:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:00:31] 
[2025-11-27 05:00:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:00:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:00:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:00:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:00:31] 
[2025-11-27 05:00:31] 2025-11-27 09:59:59,423 | INFO     | ***************************************
[2025-11-27 05:00:31] 2025-11-27 09:59:59,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 05:00:31] 2025-11-27 10:00:00,043 | INFO     | sufficient remaining disk space (67441262592 B)
[2025-11-27 05:00:31] 2025-11-27 10:00:00,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:00:31] 2025-11-27 10:00:00,043 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:00:31] 2025-11-27 10:00:00,043 | INFO     | update_server=False
[2025-11-27 05:00:31] 2025-11-27 10:00:00,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:00:31] 2025-11-27 10:00:00,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:00:31] 2025-11-27 10:00:00,155 | INFO     | aborting loop
[2025-11-27 05:00:31] 2025-11-27 10:00:00,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:00:31] 2025-11-27 10:00:00,792 | INFO     | all job control threads have been joined
[2025-11-27 05:00:31] 2025-11-27 10:00:01,027 | INFO     | all payload control threads have been joined
[2025-11-27 05:00:31] 2025-11-27 10:00:01,048 | INFO     | all data control threads have been joined
[2025-11-27 05:00:31] 2025-11-27 10:00:01,050 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,161 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,457 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,466 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:00:31] 2025-11-27 10:00:01,495 | INFO     | [job] validate thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:00:31] 2025-11-27 10:00:01,741 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:01,799 | INFO     | [job] control thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:02,016 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:02,034 | INFO     | [payload] control thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:02,047 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:02,054 | INFO     | [data] control thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:02,255 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:02,750 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:03,476 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:04,507 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:00:31] 2025-11-27 10:00:24,889 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:00:31] 2025-11-27 10:00:25,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062446131008)>', '<ExcThread(monitor, started 140061970528000)>']
[2025-11-27 05:00:31] 2025-11-27 10:00:29,511 | INFO     | PID=1724053 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:00:31] 2025-11-27 10:00:29,512 | INFO     | .. there are 60 such processes running
[2025-11-27 05:00:31] 2025-11-27 10:00:29,513 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:00:31] 2025-11-27 10:00:29,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:00:31] 2025-11-27 10:00:29,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:00:31] 2025-11-27 10:00:29,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:00:31] 2025-11-27 10:00:29,513 | INFO     | [monitor] control thread has ended
[2025-11-27 05:00:31] 2025-11-27 10:00:30,066 | INFO     | all workflow threads have been joined
[2025-11-27 05:00:31] 2025-11-27 10:00:30,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:00:31] 2025-11-27 10:00:30,067 | INFO     | traces error code: 0
[2025-11-27 05:00:31] 2025-11-27 10:00:30,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:00:31] 2025-11-27 10:00:30,321 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:00:31] 2025-11-27 10:00:30,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:00:31] 2025-11-27 10:00:30,331 [wrapper] pilotpid: 1724053
[2025-11-27 05:00:31] 2025-11-27 10:00:30,335 [wrapper] Pilot exit status: 0
[2025-11-27 05:00:31] 2025-11-27 10:00:30,353 [wrapper] pandaids: 6891568651
[2025-11-27 05:00:31] 2025-11-27 10:00:30,507 [wrapper] cleanup supervisor_pilot 2813560 1724054
[2025-11-27 05:00:31] 2025-11-27 10:00:30,512 [wrapper] Test setup, not cleaning
[2025-11-27 05:00:31] 2025-11-27 10:00:30,515 [wrapper] apfmon messages muted
[2025-11-27 05:00:31] 2025-11-27 10:00:30,518 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:00:31] 2025-11-27 10:00:30,521 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:00:31]  *** Error codes and diagnostics ***
[2025-11-27 05:00:31]     "exeErrorCode": 0,
[2025-11-27 05:00:31]     "exeErrorDiag": "",
[2025-11-27 05:00:31]     "pilotErrorCode": 0,
[2025-11-27 05:00:31]     "pilotErrorDiag": "",
[2025-11-27 05:00:31]  *** Listing of results directory ***
[2025-11-27 05:00:31] total 1326216
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 05:00:31] -rwx------. 1 boincer umatlas     36292 Nov 18 10:34 runpilot2-wrapper.sh
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:35 queuedata.json
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:00:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:02 run_atlas
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:02 job.xml
[2025-11-27 05:00:31] -rw-r--r--. 2 boincer umatlas 408280939 Nov 26 00:02 EVNT.47493065._000188.pool.root.1
[2025-11-27 05:00:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:02 start_atlas.sh
[2025-11-27 05:00:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:02 shared
[2025-11-27 05:00:31] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:02 input.tar.gz
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:02 boinc_lockfile
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:02 pandaJob.out
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas    991877 Nov 26 00:03 agis_schedconf.cvmfs.json
[2025-11-27 05:00:31] drwx------. 5 boincer umatlas      4096 Nov 26 00:03 pilot3
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:43 boinc_task_state.xml
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas      6879 Nov 27 04:56 init_data.xml
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas 916308315 Nov 27 04:58 HITS.47493068._001876.pool.root.1
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas      1072 Nov 27 04:59 memory_monitor_summary.json
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas   2693924 Nov 27 04:59 log.47493068._001876.job.log.tgz.1
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas      8625 Nov 27 04:59 heartbeat.json
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:00 boinc_mmap_file
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:00 wrapper_checkpoint.txt
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas        95 Nov 27 05:00 pilot_heartbeat.json
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas      4824 Nov 27 05:00 pilotlog.txt
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas  12077744 Nov 27 05:00 log.47493068._001876.job.log.1
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas       353 Nov 27 05:00 output.list
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:00 runtime_log
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas  14786560 Nov 27 05:00 result.tar.gz
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas      8710 Nov 27 05:00 runtime_log.err
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas       664 Nov 27 05:00 D8CNDmWucf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2XFKDmb61D0n.diag
[2025-11-27 05:00:31] -rw-r--r--. 1 boincer umatlas     21386 Nov 27 05:00 stderr.txt
[2025-11-27 05:00:31] HITS file was successfully produced:
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas 916308315 Nov 27 04:58 shared/HITS.pool.root.1
[2025-11-27 05:00:31]  *** Contents of shared directory: ***
[2025-11-27 05:00:31] total 1308592
[2025-11-27 05:00:31] -rw-r--r--. 2 boincer umatlas 408280939 Nov 26 00:02 ATLAS.root_0
[2025-11-27 05:00:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:02 start_atlas.sh
[2025-11-27 05:00:31] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:02 input.tar.gz
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas 916308315 Nov 27 04:58 HITS.pool.root.1
[2025-11-27 05:00:31] -rw-------. 1 boincer umatlas  14786560 Nov 27 05:00 result.tar.gz
05:00:33 (1716393): run_atlas exited; CPU time 276984.812338
05:00:33 (1716393): called boinc_finish(0)

</stderr_txt>
]]>

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