Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:54 (2080444): wrapper (7.7.26015): starting
00:01:54 (2080444): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:01:54] Arguments: --nthreads 8
[2025-11-26 00:01:54] Threads: 8
[2025-11-26 00:01:54] Checking for CVMFS
[2025-11-26 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:01:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:01:54] 2.13.3.0 12531 29601 439384 153309 1 141 34561889 40960000 28193 16776704 0 148950940 99.688 135280395 39511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:01:54] CVMFS is ok
[2025-11-26 00:01:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:01:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:01:54] Further information can be found at the LHC@home message board.
[2025-11-26 00:01:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:01:54] Checking for apptainer binary...
[2025-11-26 00:01:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:01:54] Running /usr/bin/apptainer --version
[2025-11-26 00:01:54] apptainer version 1.4.4-1.el9
[2025-11-26 00:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:01:55] c7-13-33.aglt2.org
[2025-11-26 00:01:55] apptainer works
[2025-11-26 00:01:55] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:01:55] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:01:55] Starting ATLAS job with PandaID=6891105284
[2025-11-26 00:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:23:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:23:37] 2025-11-27 10:22:35,232 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:23:37] 2025-11-27 10:22:35,234 | INFO     | sum of square deviations: 1605523007420.2202
[2025-11-27 05:23:37] 2025-11-27 10:22:35,291 | INFO     | sum of deviations: 8888494327370.533
[2025-11-27 05:23:37] 2025-11-27 10:22:35,291 | INFO     | mean x: 1764186162.9329479
[2025-11-27 05:23:37] 2025-11-27 10:22:35,291 | INFO     | mean y: 2902752.6768786125
[2025-11-27 05:23:37] 2025-11-27 10:22:35,291 | INFO     | intersect: -9763982324.137753
[2025-11-27 05:23:37] 2025-11-27 10:22:35,293 | INFO     | chi2: 10.497432479430593
[2025-11-27 05:23:37] 2025-11-27 10:22:35,294 | INFO     | sum of square deviations: 1591642705841.7815
[2025-11-27 05:23:37] 2025-11-27 10:22:35,348 | INFO     | sum of deviations: 9345212498746.512
[2025-11-27 05:23:37] 2025-11-27 10:22:35,348 | INFO     | mean x: 1764186010.434203
[2025-11-27 05:23:37] 2025-11-27 10:22:35,348 | INFO     | mean y: 2907768.5373913045
[2025-11-27 05:23:37] 2025-11-27 10:22:35,348 | INFO     | intersect: -10355379989.332262
[2025-11-27 05:23:37] 2025-11-27 10:22:35,349 | INFO     | chi2: 8.326323367718288
[2025-11-27 05:23:37] 2025-11-27 10:22:35,349 | INFO     | current chi2=8.326323367718288 (change=20.682286987475543 %)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,349 | INFO     | right removable region: 1724
[2025-11-27 05:23:37] 2025-11-27 10:22:35,351 | INFO     | sum of square deviations: 1591642248951.7822
[2025-11-27 05:23:37] 2025-11-27 10:22:35,391 | INFO     | sum of deviations: 8219339294686.095
[2025-11-27 05:23:37] 2025-11-27 10:22:35,392 | INFO     | mean x: 1764186315.434203
[2025-11-27 05:23:37] 2025-11-27 10:22:35,392 | INFO     | mean y: 2910104.0052173915
[2025-11-27 05:23:37] 2025-11-27 10:22:35,392 | INFO     | intersect: -9107457451.986383
[2025-11-27 05:23:37] 2025-11-27 10:22:35,393 | INFO     | chi2: 6.698986363590238
[2025-11-27 05:23:37] 2025-11-27 10:22:35,393 | INFO     | current chi2=6.698986363590238 (change=36.18452534258542 %)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,395 | INFO     | sum of square deviations: 1577841724545.8372
[2025-11-27 05:23:37] 2025-11-27 10:22:35,449 | INFO     | sum of deviations: 7654846621843.677
[2025-11-27 05:23:37] 2025-11-27 10:22:35,449 | INFO     | mean x: 1764186467.935465
[2025-11-27 05:23:37] 2025-11-27 10:22:35,449 | INFO     | mean y: 2916340.6906976746
[2025-11-27 05:23:37] 2025-11-27 10:22:35,450 | INFO     | intersect: -8555975602.837575
[2025-11-27 05:23:37] 2025-11-27 10:22:35,451 | INFO     | chi2: 4.115050446551377
[2025-11-27 05:23:37] 2025-11-27 10:22:35,451 | INFO     | current chi2=4.115050446551377 (change=38.57204324348008 %)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,452 | INFO     | sum of square deviations: 1564121411113.6318
[2025-11-27 05:23:37] 2025-11-27 10:22:35,504 | INFO     | sum of deviations: 7256453508477.662
[2025-11-27 05:23:37] 2025-11-27 10:22:35,504 | INFO     | mean x: 1764186620.4355686
[2025-11-27 05:23:37] 2025-11-27 10:22:35,504 | INFO     | mean y: 2920767.6349854227
[2025-11-27 05:23:37] 2025-11-27 10:22:35,504 | INFO     | intersect: -8181698470.045791
[2025-11-27 05:23:37] 2025-11-27 10:22:35,505 | INFO     | chi2: 2.838273811511078
[2025-11-27 05:23:37] 2025-11-27 10:22:35,505 | INFO     | current chi2=2.838273811511078 (change=31.026998371558324 %)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,507 | INFO     | sum of square deviations: 1550481076458.6653
[2025-11-27 05:23:37] 2025-11-27 10:22:35,544 | INFO     | sum of deviations: 7100207518126.733
[2025-11-27 05:23:37] 2025-11-27 10:22:35,544 | INFO     | mean x: 1764186772.9345028
[2025-11-27 05:23:37] 2025-11-27 10:22:35,544 | INFO     | mean y: 2922514.3994152048
[2025-11-27 05:23:37] 2025-11-27 10:22:35,544 | INFO     | intersect: -8075919838.955315
[2025-11-27 05:23:37] 2025-11-27 10:22:35,545 | INFO     | chi2: 2.754379146638661
[2025-11-27 05:23:37] 2025-11-27 10:22:35,545 | INFO     | current chi2=2.754379146638661 (change=2.955834089444389 %)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,545 | INFO     | left removable region: 40
[2025-11-27 05:23:37] 2025-11-27 10:22:35,546 | INFO     | sum of square deviations: 1480826794020.9443
[2025-11-27 05:23:37] 2025-11-27 10:22:35,577 | INFO     | sum of deviations: 7069142839151.476
[2025-11-27 05:23:37] 2025-11-27 10:22:35,577 | INFO     | mean x: 1764187199.9400237
[2025-11-27 05:23:37] 2025-11-27 10:22:35,577 | INFO     | mean y: 2933906.5195961995
[2025-11-27 05:23:37] 2025-11-27 10:22:35,577 | INFO     | intersect: -8418909459.452293
[2025-11-27 05:23:37] 2025-11-27 10:22:35,578 | INFO     | chi2: 0.31055015087817806
[2025-11-27 05:23:37] 2025-11-27 10:22:35,578 | INFO     | current memory leak: 4.77 B/s (using 1684 data points, chi2=0.31)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,579 | INFO     | could have reported an average CPU frequency of 3286 MHz (61 samples)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | ..............................
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . Timing measurements:
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . get job = 0 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . initial setup = 4 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . payload setup = 19 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . stage-in = 0 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . payload execution = 105530 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . stage-out = 3 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | . log creation = 0 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,580 | INFO     | ..............................
[2025-11-27 05:23:37] 2025-11-27 10:22:35,639 | INFO     | 
[2025-11-27 05:23:37] 2025-11-27 10:22:35,639 | INFO     | job summary report
[2025-11-27 05:23:37] 2025-11-27 10:22:35,639 | INFO     | --------------------------------------------------
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | PanDA job id: 6891105284
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | task id: 47483661
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | errors: (none)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | pilot state: finished 
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | transexitcode: 0
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | exeerrorcode: 0
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | exeerrordiag: 
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | exitcode: 0
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | exitmsg: OK
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | cpuconsumptiontime: 204228 s
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | nevents: 1000
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | neventsw: 0
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | pid: 2120006
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | pgrp: 2120006
[2025-11-27 05:23:37] 2025-11-27 10:22:35,640 | INFO     | corecount: 8
[2025-11-27 05:23:37] 2025-11-27 10:22:35,641 | INFO     | event service: False
[2025-11-27 05:23:37] 2025-11-27 10:22:35,641 | INFO     | sizes: {0: 2284304, 1: 2284304, 11: 2284332, 14: 2284622, 22: 2284650, 105554: 2360118, 105557: 2369112, 105558: 2369168, 105565: 2369414}
[2025-11-27 05:23:37] 2025-11-27 10:22:35,641 | INFO     | --------------------------------------------------
[2025-11-27 05:23:37] 2025-11-27 10:22:35,641 | INFO     | 
[2025-11-27 05:23:37] 2025-11-27 10:22:35,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:23:37] 2025-11-27 10:22:35,666 | INFO     | job 6891105284 has completed (purged errors)
[2025-11-27 05:23:37] 2025-11-27 10:22:35,666 | INFO     | overall cleanup function is called
[2025-11-27 05:23:37] 2025-11-27 10:22:36,684 | INFO     | --- collectZombieJob: --- 10, [2120006]
[2025-11-27 05:23:37] 2025-11-27 10:22:36,685 | INFO     | zombie collector waiting for pid 2120006
[2025-11-27 05:23:37] 2025-11-27 10:22:36,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:23:37] 2025-11-27 10:22:36,685 | INFO     | collected zombie processes
[2025-11-27 05:23:37] 2025-11-27 10:22:36,685 | INFO     | will attempt to kill all subprocesses of pid=2120006
[2025-11-27 05:23:37] 2025-11-27 10:22:37,122 | INFO     | process IDs to be killed: [2120006] (in reverse order)
[2025-11-27 05:23:37] 2025-11-27 10:22:37,289 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:23:37] 2025-11-27 10:22:37,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:23:37] 2025-11-27 10:22:37,309 | INFO     | did not find any defunct processes belonging to 2120006
[2025-11-27 05:23:37] 2025-11-27 10:22:37,328 | INFO     | did not find any defunct processes belonging to 2120006
[2025-11-27 05:23:37] 2025-11-27 10:22:37,329 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:23:37] 2025-11-27 10:22:37,329 | INFO     | ready for new job
[2025-11-27 05:23:37] 2025-11-27 10:22:37,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:23:37] 2025-11-27 10:22:37,336 | INFO     | ***************************************
[2025-11-27 05:23:37] 2025-11-27 10:22:37,336 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:23:37] 2025-11-27 10:22:37,336 | INFO     | ***************************************
[2025-11-27 05:23:37] 2025-11-27 10:22:37,336 | INFO     | 
[2025-11-27 05:23:37] 2025-11-27 10:22:37,339 | INFO     | architecture information:
[2025-11-27 05:23:37] 2025-11-27 10:22:37,339 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:23:37] 2025-11-27 10:22:37,354 | INFO     | cat /etc/os-release:
[2025-11-27 05:23:37] NAME="CentOS Linux"
[2025-11-27 05:23:37] VERSION="7 (Core)"
[2025-11-27 05:23:37] ID="centos"
[2025-11-27 05:23:37] ID_LIKE="rhel fedora"
[2025-11-27 05:23:37] VERSION_ID="7"
[2025-11-27 05:23:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:23:37] ANSI_COLOR="0;31"
[2025-11-27 05:23:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:23:37] HOME_URL="https://www.centos.org/"
[2025-11-27 05:23:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:23:37] 
[2025-11-27 05:23:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:23:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:23:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:23:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:23:37] 
[2025-11-27 05:23:37] 2025-11-27 10:22:37,354 | INFO     | ***************************************
[2025-11-27 05:23:37] 2025-11-27 10:22:37,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 05:23:37] 2025-11-27 10:22:37,887 | INFO     | sufficient remaining disk space (81103159296 B)
[2025-11-27 05:23:37] 2025-11-27 10:22:37,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:23:37] 2025-11-27 10:22:37,887 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:23:37] 2025-11-27 10:22:37,887 | INFO     | update_server=False
[2025-11-27 05:23:37] 2025-11-27 10:22:37,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:23:37] 2025-11-27 10:22:37,979 | INFO     | all data control threads have been joined
[2025-11-27 05:23:37] 2025-11-27 10:22:38,202 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 05:23:37] 2025-11-27 10:22:38,202 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 05:23:37] 2025-11-27 10:22:38,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:23:37] 2025-11-27 10:22:38,202 | INFO     | will abort loop
[2025-11-27 05:23:37] 2025-11-27 10:22:38,892 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:38,957 | INFO     | [job] validate thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:38,984 | INFO     | [data] control thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:39,000 | INFO     | all payload control threads have been joined
[2025-11-27 05:23:37] 2025-11-27 10:22:39,011 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:39,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:23:37] 2025-11-27 10:22:39,122 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:39,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:23:37] 2025-11-27 10:22:39,208 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:39,423 | INFO     | all job control threads have been joined
[2025-11-27 05:23:37] 2025-11-27 10:22:39,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:39,487 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:40,007 | INFO     | [payload] control thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:40,331 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:40,341 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:40,431 | INFO     | [job] control thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:40,468 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:40,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:23:37] 2025-11-27 10:22:41,036 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:41,658 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:22:43,130 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:23:37] 2025-11-27 10:23:07,519 | INFO     | PID=2093648 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 05:23:37] 2025-11-27 10:23:07,519 | INFO     | .. there are 48 such processes running
[2025-11-27 05:23:37] 2025-11-27 10:23:07,520 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:23:37] 2025-11-27 10:23:07,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:23:37] 2025-11-27 10:23:07,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:23:37] 2025-11-27 10:23:30,887 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:23:37] 2025-11-27 10:23:32,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141099419456)>', '<ExcThread(monitor, started 140140596938496)>']
[2025-11-27 05:23:37] 2025-11-27 10:23:32,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:23:37] 2025-11-27 10:23:32,670 | INFO     | [monitor] control thread has ended
[2025-11-27 05:23:37] 2025-11-27 10:23:37,032 | INFO     | all workflow threads have been joined
[2025-11-27 05:23:37] 2025-11-27 10:23:37,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:23:37] 2025-11-27 10:23:37,032 | INFO     | traces error code: 0
[2025-11-27 05:23:37] 2025-11-27 10:23:37,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:23:37] 2025-11-27 10:23:37,274 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:23:37] 2025-11-27 10:23:37,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:23:37] 2025-11-27 10:23:37,297 [wrapper] pilotpid: 2093648
[2025-11-27 05:23:37] 2025-11-27 10:23:37,301 [wrapper] Pilot exit status: 0
[2025-11-27 05:23:37] 2025-11-27 10:23:37,322 [wrapper] pandaids: 6891105284
[2025-11-27 05:23:37] 2025-11-27 10:23:37,440 [wrapper] cleanup supervisor_pilot 2545794 2093649
[2025-11-27 05:23:37] 2025-11-27 10:23:37,445 [wrapper] Test setup, not cleaning
[2025-11-27 05:23:37] 2025-11-27 10:23:37,449 [wrapper] apfmon messages muted
[2025-11-27 05:23:37] 2025-11-27 10:23:37,456 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:23:37] 2025-11-27 10:23:37,461 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:23:37]  *** Error codes and diagnostics ***
[2025-11-27 05:23:37]     "exeErrorCode": 0,
[2025-11-27 05:23:37]     "exeErrorDiag": "",
[2025-11-27 05:23:37]     "pilotErrorCode": 0,
[2025-11-27 05:23:37]     "pilotErrorDiag": "",
[2025-11-27 05:23:37]  *** Listing of results directory ***
[2025-11-27 05:23:37] total 1352984
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 01:54 pilot3.tar.gz
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 01:58 queuedata.json
[2025-11-27 05:23:37] -rwx------. 1 boincer umatlas     36292 Nov 18 01:59 runpilot2-wrapper.sh
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:23:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:01 run_atlas
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:01 job.xml
[2025-11-27 05:23:37] -rw-r--r--. 2 boincer umatlas 409077701 Nov 26 00:01 EVNT.47483658._000242.pool.root.1
[2025-11-27 05:23:37] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:01 start_atlas.sh
[2025-11-27 05:23:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:01 shared
[2025-11-27 05:23:37] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:01 input.tar.gz
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:01 boinc_lockfile
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:01 pandaJob.out
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas    991877 Nov 26 00:02 agis_schedconf.cvmfs.json
[2025-11-27 05:23:37] drwx------. 5 boincer umatlas      4096 Nov 26 00:02 pilot3
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas       533 Nov 27 05:13 boinc_task_state.xml
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas      6901 Nov 27 05:21 init_data.xml
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas 938645191 Nov 27 05:21 HITS.47483661._002116.pool.root.1
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas      1049 Nov 27 05:22 memory_monitor_summary.json
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:22 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas   2735099 Nov 27 05:22 log.47483661._002116.job.log.tgz.1
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas      8582 Nov 27 05:22 heartbeat.json
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas        95 Nov 27 05:23 pilot_heartbeat.json
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas      5011 Nov 27 05:23 pilotlog.txt
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:23 boinc_mmap_file
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:23 wrapper_checkpoint.txt
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas  14172158 Nov 27 05:23 log.47483661._002116.job.log.1
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas       353 Nov 27 05:23 output.list
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:23 runtime_log
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas  16926720 Nov 27 05:23 result.tar.gz
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas       664 Nov 27 05:23 WfxMDmQrUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDmT8qMDmnDXqhm.diag
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas      8705 Nov 27 05:23 runtime_log.err
[2025-11-27 05:23:37] -rw-r--r--. 1 boincer umatlas     21176 Nov 27 05:23 stderr.txt
[2025-11-27 05:23:37] HITS file was successfully produced:
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas 938645191 Nov 27 05:21 shared/HITS.pool.root.1
[2025-11-27 05:23:37]  *** Contents of shared directory: ***
[2025-11-27 05:23:37] total 1333276
[2025-11-27 05:23:37] -rw-r--r--. 2 boincer umatlas 409077701 Nov 26 00:01 ATLAS.root_0
[2025-11-27 05:23:37] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:01 start_atlas.sh
[2025-11-27 05:23:37] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:01 input.tar.gz
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas 938645191 Nov 27 05:21 HITS.pool.root.1
[2025-11-27 05:23:37] -rw-------. 1 boincer umatlas  16926720 Nov 27 05:23 result.tar.gz
05:23:39 (2080444): run_atlas exited; CPU time 205901.903780
05:23:39 (2080444): called boinc_finish(0)

</stderr_txt>
]]>

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