Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:24 (140620): wrapper (7.7.26015): starting
00:11:24 (140620): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:11:24] Arguments: --nthreads 9
[2025-11-27 00:11:24] Threads: 9
[2025-11-27 00:11:24] Checking for CVMFS
[2025-11-27 00:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:11:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:11:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:11:26] 2.13.3.0 12130 29356 348684 153348 3 81 37350788 40960000 21441 16776704 0 97638582 99.654 87720400 35712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:11:26] CVMFS is ok
[2025-11-27 00:11:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:11:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:11:26] Further information can be found at the LHC@home message board.
[2025-11-27 00:11:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:11:26] Checking for apptainer binary...
[2025-11-27 00:11:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:11:26] Running /usr/bin/apptainer --version
[2025-11-27 00:11:27] apptainer version 1.4.4-1.el9
[2025-11-27 00:11:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:11:28] c6-5-7-4.aglt2.org
[2025-11-27 00:11:28] apptainer works
[2025-11-27 00:11:28] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:11:28] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:11:28] Starting ATLAS job with PandaID=6896219220
[2025-11-27 00:11:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:35:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:35:34] 2025-11-28 03:35:00,097 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:35:34] 2025-11-28 03:35:00,100 | INFO     | sum of square deviations: 708283833313.5916
[2025-11-27 22:35:34] 2025-11-28 03:35:00,128 | INFO     | monitor loop #4826: job 0:6896219220 is in state 'finished'
[2025-11-27 22:35:34] 2025-11-28 03:35:00,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,147 | INFO     | sum of deviations: 5946277745206.95
[2025-11-27 22:35:34] 2025-11-28 03:35:00,148 | INFO     | mean x: 1764260691.3842065
[2025-11-27 22:35:34] 2025-11-28 03:35:00,148 | INFO     | mean y: 3057486.0356871677
[2025-11-27 22:35:34] 2025-11-28 03:35:00,148 | INFO     | intersect: -14808496290.141718
[2025-11-27 22:35:34] 2025-11-28 03:35:00,150 | INFO     | chi2: 17.831570533989517
[2025-11-27 22:35:34] 2025-11-28 03:35:00,151 | INFO     | sum of square deviations: 700248643597.1187
[2025-11-27 22:35:34] 2025-11-28 03:35:00,181 | INFO     | sum of deviations: 6409711762954.853
[2025-11-27 22:35:34] 2025-11-28 03:35:00,181 | INFO     | mean x: 1764260538.9009147
[2025-11-27 22:35:34] 2025-11-28 03:35:00,181 | INFO     | mean y: 3066282.0373475607
[2025-11-27 22:35:34] 2025-11-28 03:35:00,181 | INFO     | intersect: -16146056793.76034
[2025-11-27 22:35:34] 2025-11-28 03:35:00,183 | INFO     | chi2: 14.81559737456119
[2025-11-27 22:35:34] 2025-11-28 03:35:00,183 | INFO     | current chi2=14.81559737456119 (change=16.913670916868774 %)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,183 | INFO     | right removable region: 1311
[2025-11-27 22:35:34] 2025-11-28 03:35:00,184 | INFO     | sum of square deviations: 700245121457.1176
[2025-11-27 22:35:34] 2025-11-28 03:35:00,214 | INFO     | sum of deviations: 5360491992613.732
[2025-11-27 22:35:34] 2025-11-28 03:35:00,214 | INFO     | mean x: 1764260843.9009147
[2025-11-27 22:35:34] 2025-11-28 03:35:00,214 | INFO     | mean y: 3068599.2286585364
[2025-11-27 22:35:34] 2025-11-28 03:35:00,214 | INFO     | intersect: -13502639383.332355
[2025-11-27 22:35:34] 2025-11-28 03:35:00,216 | INFO     | chi2: 13.13667278914112
[2025-11-27 22:35:34] 2025-11-28 03:35:00,216 | INFO     | current chi2=13.13667278914112 (change=26.32913200718497 %)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,217 | INFO     | sum of square deviations: 692267433999.9083
[2025-11-27 22:35:34] 2025-11-28 03:35:00,256 | INFO     | sum of deviations: 4819877409982.503
[2025-11-27 22:35:34] 2025-11-28 03:35:00,256 | INFO     | mean x: 1764260996.4177506
[2025-11-27 22:35:34] 2025-11-28 03:35:00,257 | INFO     | mean y: 3078935.0045906655
[2025-11-27 22:35:34] 2025-11-28 03:35:00,257 | INFO     | intersect: -12280500075.514433
[2025-11-27 22:35:34] 2025-11-28 03:35:00,262 | INFO     | chi2: 9.279342779264592
[2025-11-27 22:35:34] 2025-11-28 03:35:00,263 | INFO     | current chi2=9.279342779264592 (change=29.36306682667035 %)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,264 | INFO     | sum of square deviations: 684350538379.4506
[2025-11-27 22:35:34] 2025-11-28 03:35:00,305 | INFO     | sum of deviations: 4340723844561.985
[2025-11-27 22:35:34] 2025-11-28 03:35:00,305 | INFO     | mean x: 1764261148.9347157
[2025-11-27 22:35:34] 2025-11-28 03:35:00,306 | INFO     | mean y: 3088164.0468509984
[2025-11-27 22:35:34] 2025-11-28 03:35:00,306 | INFO     | intersect: -11187332545.418613
[2025-11-27 22:35:34] 2025-11-28 03:35:00,308 | INFO     | chi2: 6.352734769885996
[2025-11-27 22:35:34] 2025-11-28 03:35:00,308 | INFO     | current chi2=6.352734769885996 (change=31.538957865834295 %)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,310 | INFO     | sum of square deviations: 676494360771.0421
[2025-11-27 22:35:34] 2025-11-28 03:35:00,354 | INFO     | sum of deviations: 3972597902536.96
[2025-11-27 22:35:34] 2025-11-28 03:35:00,355 | INFO     | mean x: 1764261301.45027
[2025-11-27 22:35:34] 2025-11-28 03:35:00,355 | INFO     | mean y: 3095310.270624518
[2025-11-27 22:35:34] 2025-11-28 03:35:00,355 | INFO     | intersect: -10357228665.941422
[2025-11-27 22:35:34] 2025-11-28 03:35:00,357 | INFO     | chi2: 4.770853949609889
[2025-11-27 22:35:34] 2025-11-28 03:35:00,357 | INFO     | current chi2=4.770853949609889 (change=24.900784899359092 %)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,357 | INFO     | left removable region: 40
[2025-11-27 22:35:34] 2025-11-28 03:35:00,359 | INFO     | sum of square deviations: 636615769077.5607
[2025-11-27 22:35:34] 2025-11-28 03:35:00,398 | INFO     | sum of deviations: 4021546781221.337
[2025-11-27 22:35:34] 2025-11-28 03:35:00,398 | INFO     | mean x: 1764261728.512195
[2025-11-27 22:35:34] 2025-11-28 03:35:00,398 | INFO     | mean y: 3114734.3005507477
[2025-11-27 22:35:34] 2025-11-28 03:35:00,399 | INFO     | intersect: -11141851225.01077
[2025-11-27 22:35:34] 2025-11-28 03:35:00,400 | INFO     | chi2: 0.9523664361191532
[2025-11-27 22:35:34] 2025-11-28 03:35:00,401 | INFO     | current memory leak: 6.32 B/s (using 1271 data points, chi2=0.95)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,403 | INFO     | could have reported an average CPU frequency of 2829 MHz (47 samples)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,403 | INFO     | ..............................
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . Timing measurements:
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . get job = 1 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . initial setup = 8 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . payload setup = 58 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . stage-in = 0 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . payload execution = 80365 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . stage-out = 4 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | . log creation = 1 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,404 | INFO     | ..............................
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | 
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | job summary report
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | --------------------------------------------------
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | PanDA job id: 6896219220
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | task id: 47556161
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | errors: (none)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:35:34] 2025-11-28 03:35:00,508 | INFO     | pilot state: finished 
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | transexitcode: 0
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | exeerrorcode: 0
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | exeerrordiag: 
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | exitcode: 0
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | exitmsg: OK
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | cpuconsumptiontime: 248926 s
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | nevents: 1000
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | neventsw: 0
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | pid: 177341
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | pgrp: 177341
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | corecount: 9
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | event service: False
[2025-11-27 22:35:34] 2025-11-28 03:35:00,509 | INFO     | sizes: {0: 2283484, 1: 2284169, 2: 2284169, 3: 2284396, 14: 2284396, 25: 2284424, 36: 2284580, 37: 2284870, 47: 2284898, 80427: 2347505, 80432: 2356499, 80434: 235
[2025-11-27 22:35:34] 2025-11-28 03:35:00,510 | INFO     | --------------------------------------------------
[2025-11-27 22:35:34] 2025-11-28 03:35:00,510 | INFO     | 
[2025-11-27 22:35:34] 2025-11-28 03:35:00,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 22:35:34] 2025-11-28 03:35:00,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:35:34] 2025-11-28 03:35:00,537 | INFO     | job 6896219220 has completed (purged errors)
[2025-11-27 22:35:34] 2025-11-28 03:35:00,537 | INFO     | overall cleanup function is called
[2025-11-27 22:35:34] 2025-11-28 03:35:01,558 | INFO     | --- collectZombieJob: --- 10, [177341]
[2025-11-27 22:35:34] 2025-11-28 03:35:01,558 | INFO     | zombie collector waiting for pid 177341
[2025-11-27 22:35:34] 2025-11-28 03:35:01,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:35:34] 2025-11-28 03:35:01,558 | INFO     | collected zombie processes
[2025-11-27 22:35:34] 2025-11-28 03:35:01,558 | INFO     | will attempt to kill all subprocesses of pid=177341
[2025-11-27 22:35:34] 2025-11-28 03:35:01,892 | INFO     | process IDs to be killed: [177341] (in reverse order)
[2025-11-27 22:35:34] 2025-11-28 03:35:02,010 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:35:34] 2025-11-28 03:35:02,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:35:34] 2025-11-28 03:35:02,026 | INFO     | did not find any defunct processes belonging to 177341
[2025-11-27 22:35:34] 2025-11-28 03:35:02,057 | INFO     | did not find any defunct processes belonging to 177341
[2025-11-27 22:35:34] 2025-11-28 03:35:02,059 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:35:34] 2025-11-28 03:35:02,059 | INFO     | ready for new job
[2025-11-27 22:35:34] 2025-11-28 03:35:02,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:35:34] 2025-11-28 03:35:02,080 | INFO     | ***************************************
[2025-11-27 22:35:34] 2025-11-28 03:35:02,081 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:35:34] 2025-11-28 03:35:02,081 | INFO     | ***************************************
[2025-11-27 22:35:34] 2025-11-28 03:35:02,081 | INFO     | 
[2025-11-27 22:35:34] 2025-11-28 03:35:02,086 | INFO     | architecture information:
[2025-11-27 22:35:34] 2025-11-28 03:35:02,089 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:35:34] 2025-11-28 03:35:02,120 | INFO     | cat /etc/os-release:
[2025-11-27 22:35:34] NAME="CentOS Linux"
[2025-11-27 22:35:34] VERSION="7 (Core)"
[2025-11-27 22:35:34] ID="centos"
[2025-11-27 22:35:34] ID_LIKE="rhel fedora"
[2025-11-27 22:35:34] VERSION_ID="7"
[2025-11-27 22:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:35:34] ANSI_COLOR="0;31"
[2025-11-27 22:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:35:34] HOME_URL="https://www.centos.org/"
[2025-11-27 22:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:35:34] 
[2025-11-27 22:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:35:34] 
[2025-11-27 22:35:34] 2025-11-28 03:35:02,121 | INFO     | ***************************************
[2025-11-27 22:35:34] 2025-11-28 03:35:02,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 22:35:34] 2025-11-28 03:35:02,646 | INFO     | sufficient remaining disk space (71685898240 B)
[2025-11-27 22:35:34] 2025-11-28 03:35:02,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:35:34] 2025-11-28 03:35:02,647 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:35:34] 2025-11-28 03:35:02,647 | INFO     | update_server=False
[2025-11-27 22:35:34] 2025-11-28 03:35:02,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:35:34] 2025-11-28 03:35:02,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:35:34] 2025-11-28 03:35:03,119 | INFO     | all payload control threads have been joined
[2025-11-27 22:35:34] 2025-11-28 03:35:03,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:35:34] 2025-11-28 03:35:03,371 | INFO     | all job control threads have been joined
[2025-11-27 22:35:34] 2025-11-28 03:35:03,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:35:34] 2025-11-28 03:35:03,644 | INFO     | aborting loop
[2025-11-27 22:35:34] 2025-11-28 03:35:03,653 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:03,667 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:03,682 | INFO     | all data control threads have been joined
[2025-11-27 22:35:34] 2025-11-28 03:35:03,923 | INFO     | [job] validate thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:03,943 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,127 | INFO     | [payload] control thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,130 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,154 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,335 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,376 | INFO     | [job] control thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,649 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,687 | INFO     | [data] control thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:04,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:05,112 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:05,223 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:05,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:35:34] 2025-11-28 03:35:06,527 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:06,655 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:35:34] 2025-11-28 03:35:14,945 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:35:34] 2025-11-28 03:35:15,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841764550464)>', '<ExcThread(monitor, started 139841417230080)>']
[2025-11-27 22:35:34] 2025-11-28 03:35:20,286 | INFO     | all workflow threads have been joined
[2025-11-27 22:35:34] 2025-11-28 03:35:20,287 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:35:34] 2025-11-28 03:35:20,288 | INFO     | traces error code: 0
[2025-11-27 22:35:34] 2025-11-28 03:35:20,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:35:34] 2025-11-28 03:35:33,546 | INFO     | PID=153654 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 22:35:34] 2025-11-28 03:35:33,546 | INFO     | .. there are 24 such processes running
[2025-11-27 22:35:34] 2025-11-28 03:35:33,547 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:35:34] 2025-11-28 03:35:33,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:35:34] 2025-11-28 03:35:33,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:35:34] 2025-11-28 03:35:33,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:35:34] 2025-11-28 03:35:33,547 | INFO     | [monitor] control thread has ended
[2025-11-27 22:35:34] 2025-11-28 03:35:33,763 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:35:34] 2025-11-28 03:35:33,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:35:34] 2025-11-28 03:35:33,798 [wrapper] pilotpid: 153654
[2025-11-27 22:35:34] 2025-11-28 03:35:33,828 [wrapper] Pilot exit status: 0
[2025-11-27 22:35:34] 2025-11-28 03:35:33,875 [wrapper] pandaids: 6896219220
[2025-11-27 22:35:34] 2025-11-28 03:35:33,958 [wrapper] cleanup supervisor_pilot 3775903 153655
[2025-11-27 22:35:34] 2025-11-28 03:35:33,961 [wrapper] Test setup, not cleaning
[2025-11-27 22:35:34] 2025-11-28 03:35:33,965 [wrapper] apfmon messages muted
[2025-11-27 22:35:34] 2025-11-28 03:35:33,974 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:35:34] 2025-11-28 03:35:33,978 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:35:34]  *** Error codes and diagnostics ***
[2025-11-27 22:35:34]     "exeErrorCode": 0,
[2025-11-27 22:35:34]     "exeErrorDiag": "",
[2025-11-27 22:35:34]     "pilotErrorCode": 0,
[2025-11-27 22:35:34]     "pilotErrorDiag": "",
[2025-11-27 22:35:34]  *** Listing of results directory ***
[2025-11-27 22:35:34] total 1318316
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-27 22:35:34] -rwx------. 1 boincer umatlas     36292 Nov 24 14:46 runpilot2-wrapper.sh
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:46 queuedata.json
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:35:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:11 run_atlas
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:11 job.xml
[2025-11-27 22:35:34] -rw-r--r--. 2 boincer umatlas 408751915 Nov 27 00:11 EVNT.47483658._002060.pool.root.1
[2025-11-27 22:35:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:11 start_atlas.sh
[2025-11-27 22:35:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:11 shared
[2025-11-27 22:35:34] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 00:11 input.tar.gz
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:11 boinc_lockfile
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 00:11 pandaJob.out
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas        57 Nov 27 00:11 setup.sh.local
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas    991570 Nov 27 00:12 agis_schedconf.cvmfs.json
[2025-11-27 22:35:34] drwx------. 5 boincer umatlas      4096 Nov 27 00:12 pilot3
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas       533 Nov 27 22:18 boinc_task_state.xml
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas      6840 Nov 27 22:30 init_data.xml
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas 911934919 Nov 27 22:34 HITS.47556161._000434.pool.root.1
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas      1058 Nov 27 22:34 memory_monitor_summary.json
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas   1516240 Nov 27 22:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas   2502224 Nov 27 22:34 log.47556161._000434.job.log.tgz.1
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas      8617 Nov 27 22:35 heartbeat.json
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 22:35 boinc_mmap_file
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas        29 Nov 27 22:35 wrapper_checkpoint.txt
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas       822 Nov 27 22:35 pilotlog.txt
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas        95 Nov 27 22:35 pilot_heartbeat.json
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas  10177351 Nov 27 22:35 log.47556161._000434.job.log.1
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas       353 Nov 27 22:35 output.list
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas       620 Nov 27 22:35 runtime_log
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas  12697600 Nov 27 22:35 result.tar.gz
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas       660 Nov 27 22:35 vt5NDmugrh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiBJKDmo7TiHm.diag
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 22:35 runtime_log.err
[2025-11-27 22:35:34] -rw-r--r--. 1 boincer umatlas     21207 Nov 27 22:35 stderr.txt
[2025-11-27 22:35:34] HITS file was successfully produced:
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas 911934919 Nov 27 22:34 shared/HITS.pool.root.1
[2025-11-27 22:35:34]  *** Contents of shared directory: ***
[2025-11-27 22:35:34] total 1302736
[2025-11-27 22:35:34] -rw-r--r--. 2 boincer umatlas 408751915 Nov 27 00:11 ATLAS.root_0
[2025-11-27 22:35:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:11 start_atlas.sh
[2025-11-27 22:35:34] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 00:11 input.tar.gz
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas 911934919 Nov 27 22:34 HITS.pool.root.1
[2025-11-27 22:35:34] -rw-------. 1 boincer umatlas  12697600 Nov 27 22:35 result.tar.gz
22:35:35 (140620): run_atlas exited; CPU time 250617.792778
22:35:35 (140620): called boinc_finish(0)

</stderr_txt>
]]>

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