Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:13:44 (3768072): wrapper (7.7.26015): starting
19:13:44 (3768072): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 19:13:44] Arguments: --nthreads 9
[2025-11-26 19:13:44] Threads: 9
[2025-11-26 19:13:44] Checking for CVMFS
[2025-11-26 19:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:13:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:13:46] 2.13.3.0 9262 30621 338824 153340 2 584 28304842 32935936 27989 16776704 0 156293701 99.768 89057611 33600 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:13:46] CVMFS is ok
[2025-11-26 19:13:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:13:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:13:46] Further information can be found at the LHC@home message board.
[2025-11-26 19:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:13:46] Checking for apptainer binary...
[2025-11-26 19:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:13:46] Running /usr/bin/apptainer --version
[2025-11-26 19:13:46] apptainer version 1.4.4-1.el9
[2025-11-26 19:13:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:13:47] c-8-32.aglt2.org
[2025-11-26 19:13:47] apptainer works
[2025-11-26 19:13:47] Set ATHENA_PROC_NUMBER=9
[2025-11-26 19:13:47] Set ATHENA_CORE_NUMBER=9
[2025-11-26 19:13:47] Starting ATLAS job with PandaID=6896715490
[2025-11-26 19:13:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:24:27]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:24:27] 2025-11-28 01:23:26,949 | INFO     | time since job start (90537s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:28,388 | INFO     | monitor loop #5055: job 0:6896715490 is in state 'finished'
[2025-11-27 20:24:27] 2025-11-28 01:23:28,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:24:27] 2025-11-28 01:23:28,956 | INFO     | time since job start (90539s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:30,896 | INFO     | monitor loop #5056: job 0:6896715490 is in state 'finished'
[2025-11-27 20:24:27] 2025-11-28 01:23:30,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:24:27] 2025-11-28 01:23:30,999 | INFO     | time since job start (90541s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:33,062 | INFO     | time since job start (90544s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:33,400 | INFO     | monitor loop #5057: job 0:6896715490 is in state 'finished'
[2025-11-27 20:24:27] 2025-11-28 01:23:33,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:24:27] 2025-11-28 01:23:35,103 | INFO     | time since job start (90546s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:35,917 | INFO     | monitor loop #5058: job 0:6896715490 is in state 'finished'
[2025-11-27 20:24:27] 2025-11-28 01:23:35,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:24:27] 2025-11-28 01:23:37,109 | INFO     | time since job start (90548s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:38,428 | INFO     | monitor loop #5059: job 0:6896715490 is in state 'finished'
[2025-11-27 20:24:27] 2025-11-28 01:23:38,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:24:27] 2025-11-28 01:23:39,119 | INFO     | time since job start (90550s) is within the limit (172800.0s)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,101 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:24:27] 2025-11-28 01:23:40,194 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2340749999994
[2025-11-27 20:24:27] 2025-11-28 01:23:40,207 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896715490/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,207 | INFO     | extracted standard info from prmon json
[2025-11-27 20:24:27] 2025-11-28 01:23:40,207 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:24:27] 2025-11-28 01:23:40,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:24:27] 2025-11-28 01:23:40,241 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:24:27] 2025-11-28 01:23:40,247 | INFO     | sum of square deviations: 1011391648818.5751
[2025-11-27 20:24:27] 2025-11-28 01:23:40,354 | INFO     | sum of deviations: 2543277360774.7036
[2025-11-27 20:24:27] 2025-11-28 01:23:40,355 | INFO     | mean x: 1764247739.7080243
[2025-11-27 20:24:27] 2025-11-28 01:23:40,355 | INFO     | mean y: 3153782.428860418
[2025-11-27 20:24:27] 2025-11-28 01:23:40,355 | INFO     | intersect: -4433279265.479606
[2025-11-27 20:24:27] 2025-11-28 01:23:40,357 | INFO     | chi2: 17.377620809525826
[2025-11-27 20:24:27] 2025-11-28 01:23:40,359 | INFO     | sum of square deviations: 1001197792172.7188
[2025-11-27 20:24:27] 2025-11-28 01:23:40,439 | INFO     | sum of deviations: 3092798762745.089
[2025-11-27 20:24:27] 2025-11-28 01:23:40,439 | INFO     | mean x: 1764247587.2165089
[2025-11-27 20:24:27] 2025-11-28 01:23:40,439 | INFO     | mean y: 3162001.759133965
[2025-11-27 20:24:27] 2025-11-28 01:23:40,439 | INFO     | intersect: -5446772863.836255
[2025-11-27 20:24:27] 2025-11-28 01:23:40,441 | INFO     | chi2: 14.096818948656995
[2025-11-27 20:24:27] 2025-11-28 01:23:40,442 | INFO     | current chi2=14.096818948656995 (change=18.879465128335667 %)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,442 | INFO     | right removable region: 1477
[2025-11-27 20:24:27] 2025-11-28 01:23:40,446 | INFO     | sum of square deviations: 1001195432749.2827
[2025-11-27 20:24:27] 2025-11-28 01:23:40,554 | INFO     | sum of deviations: 1972532422522.7734
[2025-11-27 20:24:27] 2025-11-28 01:23:40,554 | INFO     | mean x: 1764247892.2171855
[2025-11-27 20:24:27] 2025-11-28 01:23:40,554 | INFO     | mean y: 3162316.536535859
[2025-11-27 20:24:27] 2025-11-28 01:23:40,555 | INFO     | intersect: -3472718670.2650943
[2025-11-27 20:24:27] 2025-11-28 01:23:40,557 | INFO     | chi2: 14.19417724448379
[2025-11-27 20:24:27] 2025-11-28 01:23:40,557 | INFO     | current chi2=14.19417724448379 (change=18.319214119904036 %)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,557 | INFO     | left removable region: 10
[2025-11-27 20:24:27] 2025-11-28 01:23:40,559 | INFO     | sum of square deviations: 979008533089.8505
[2025-11-27 20:24:27] 2025-11-28 01:23:40,631 | INFO     | sum of deviations: 2452616170564.9854
[2025-11-27 20:24:27] 2025-11-28 01:23:40,632 | INFO     | mean x: 1764247861.734833
[2025-11-27 20:24:27] 2025-11-28 01:23:40,632 | INFO     | mean y: 3174999.3367416495
[2025-11-27 20:24:27] 2025-11-28 01:23:40,632 | INFO     | intersect: -4416625940.415056
[2025-11-27 20:24:27] 2025-11-28 01:23:40,634 | INFO     | chi2: 9.914259854520608
[2025-11-27 20:24:27] 2025-11-28 01:23:40,634 | INFO     | current memory leak: 2.51 B/s (using 1467 data points, chi2=9.91)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,636 | INFO     | could have reported an average CPU frequency of 2598 MHz (53 samples)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,636 | INFO     | ..............................
[2025-11-27 20:24:27] 2025-11-28 01:23:40,636 | INFO     | . Timing measurements:
[2025-11-27 20:24:27] 2025-11-28 01:23:40,636 | INFO     | . get job = 0 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,636 | INFO     | . initial setup = 5 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,637 | INFO     | . payload setup = 20 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,637 | INFO     | . stage-in = 0 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,637 | INFO     | . payload execution = 90426 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,637 | INFO     | . stage-out = 35 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,637 | INFO     | . log creation = 1 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,637 | INFO     | ..............................
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | 
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | job summary report
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | --------------------------------------------------
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | PanDA job id: 6896715490
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | task id: 47556161
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | errors: (none)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:24:27] 2025-11-28 01:23:40,780 | INFO     | pilot state: finished 
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | transexitcode: 0
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | exeerrorcode: 0
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | exeerrordiag: 
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | exitcode: 0
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | exitmsg: OK
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | cpuconsumptiontime: 294802 s
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | nevents: 1000
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | neventsw: 0
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | pid: 3784877
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | pgrp: 3784877
[2025-11-27 20:24:27] 2025-11-28 01:23:40,781 | INFO     | corecount: 9
[2025-11-27 20:24:27] 2025-11-28 01:23:40,782 | INFO     | event service: False
[2025-11-27 20:24:27] 2025-11-28 01:23:40,782 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284292, 12: 2284320, 13: 2284610, 23: 2284666, 90450: 2349874, 90486: 2359170, 90518: 2359234}
[2025-11-27 20:24:27] 2025-11-28 01:23:40,782 | INFO     | --------------------------------------------------
[2025-11-27 20:24:27] 2025-11-28 01:23:40,782 | INFO     | 
[2025-11-27 20:24:27] 2025-11-28 01:23:40,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 20:24:27] 2025-11-28 01:23:40,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:40,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:24:27] 2025-11-28 01:23:41,000 | INFO     | job 6896715490 has completed (purged errors)
[2025-11-27 20:24:27] 2025-11-28 01:23:41,000 | INFO     | overall cleanup function is called
[2025-11-27 20:24:27] 2025-11-28 01:23:42,023 | INFO     | --- collectZombieJob: --- 10, [3784877]
[2025-11-27 20:24:27] 2025-11-28 01:23:42,024 | INFO     | zombie collector waiting for pid 3784877
[2025-11-27 20:24:27] 2025-11-28 01:23:42,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:24:27] 2025-11-28 01:23:42,024 | INFO     | collected zombie processes
[2025-11-27 20:24:27] 2025-11-28 01:23:42,024 | INFO     | will attempt to kill all subprocesses of pid=3784877
[2025-11-27 20:24:27] 2025-11-28 01:23:42,823 | INFO     | process IDs to be killed: [3784877] (in reverse order)
[2025-11-27 20:24:27] 2025-11-28 01:23:43,112 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:24:27] 2025-11-28 01:23:43,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:24:27] 2025-11-28 01:23:43,132 | INFO     | did not find any defunct processes belonging to 3784877
[2025-11-27 20:24:27] 2025-11-28 01:23:43,151 | INFO     | did not find any defunct processes belonging to 3784877
[2025-11-27 20:24:27] 2025-11-28 01:23:43,167 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:24:27] 2025-11-28 01:23:43,167 | INFO     | ready for new job
[2025-11-27 20:24:27] 2025-11-28 01:23:43,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:24:27] 2025-11-28 01:23:43,173 | INFO     | ***************************************
[2025-11-27 20:24:27] 2025-11-28 01:23:43,173 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:24:27] 2025-11-28 01:23:43,174 | INFO     | ***************************************
[2025-11-27 20:24:27] 2025-11-28 01:23:43,174 | INFO     | 
[2025-11-27 20:24:27] 2025-11-28 01:23:43,176 | INFO     | architecture information:
[2025-11-27 20:24:27] 2025-11-28 01:23:43,177 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:24:27] 2025-11-28 01:23:43,220 | INFO     | cat /etc/os-release:
[2025-11-27 20:24:27] NAME="CentOS Linux"
[2025-11-27 20:24:27] VERSION="7 (Core)"
[2025-11-27 20:24:27] ID="centos"
[2025-11-27 20:24:27] ID_LIKE="rhel fedora"
[2025-11-27 20:24:27] VERSION_ID="7"
[2025-11-27 20:24:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:24:27] ANSI_COLOR="0;31"
[2025-11-27 20:24:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:24:27] HOME_URL="https://www.centos.org/"
[2025-11-27 20:24:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:24:27] 
[2025-11-27 20:24:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:24:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:24:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:24:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:24:27] 
[2025-11-27 20:24:27] 2025-11-28 01:23:43,221 | INFO     | ***************************************
[2025-11-27 20:24:27] 2025-11-28 01:23:43,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 20:24:27] 2025-11-28 01:23:43,783 | INFO     | sufficient remaining disk space (70070042624 B)
[2025-11-27 20:24:27] 2025-11-28 01:23:43,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:24:27] 2025-11-28 01:23:43,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:24:27] 2025-11-28 01:23:43,786 | INFO     | update_server=False
[2025-11-27 20:24:27] 2025-11-28 01:23:43,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:24:27] 2025-11-28 01:23:43,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:24:27] 2025-11-28 01:23:44,069 | INFO     | all data control threads have been joined
[2025-11-27 20:24:27] 2025-11-28 01:23:44,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:24:27] 2025-11-28 01:23:44,482 | INFO     | aborting loop
[2025-11-27 20:24:27] 2025-11-28 01:23:44,793 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,033 | INFO     | all payload control threads have been joined
[2025-11-27 20:24:27] 2025-11-28 01:23:45,077 | INFO     | [data] control thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,300 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,443 | INFO     | [job] validate thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,444 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,450 | INFO     | all job control threads have been joined
[2025-11-27 20:24:27] 2025-11-28 01:23:45,488 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,794 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:24:27] 2025-11-28 01:23:45,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,865 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,893 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:45,917 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:46,045 | INFO     | [payload] control thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:46,346 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:46,457 | INFO     | [job] control thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:46,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:24:27] 2025-11-28 01:23:46,803 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:23:50,541 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:24:27] 2025-11-28 01:24:13,136 | INFO     | PID=3773243 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:24:27] 2025-11-28 01:24:13,136 | INFO     | .. there are 43 such processes running
[2025-11-27 20:24:27] 2025-11-28 01:24:13,137 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:24:27] 2025-11-28 01:24:13,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:24:27] 2025-11-28 01:24:13,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:24:27] 2025-11-28 01:24:19,961 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:24:27] 2025-11-28 01:24:20,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172838852416)>', '<ExcThread(monitor, started 140172331038464)>']
[2025-11-27 20:24:27] 2025-11-28 01:24:21,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:24:27] 2025-11-28 01:24:21,216 | INFO     | [monitor] control thread has ended
[2025-11-27 20:24:27] 2025-11-28 01:24:25,963 | INFO     | all workflow threads have been joined
[2025-11-27 20:24:27] 2025-11-28 01:24:25,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:24:27] 2025-11-28 01:24:25,970 | INFO     | traces error code: 0
[2025-11-27 20:24:27] 2025-11-28 01:24:25,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:24:27] 2025-11-28 01:24:26,352 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:24:27] 2025-11-28 01:24:26,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:24:27] 2025-11-28 01:24:26,402 [wrapper] pilotpid: 3773243
[2025-11-27 20:24:27] 2025-11-28 01:24:26,418 [wrapper] Pilot exit status: 0
[2025-11-27 20:24:27] 2025-11-28 01:24:26,534 [wrapper] pandaids: 6896715490
[2025-11-27 20:24:27] 2025-11-28 01:24:26,763 [wrapper] cleanup supervisor_pilot 1359852 3773244
[2025-11-27 20:24:27] 2025-11-28 01:24:26,801 [wrapper] Test setup, not cleaning
[2025-11-27 20:24:27] 2025-11-28 01:24:26,826 [wrapper] apfmon messages muted
[2025-11-27 20:24:27] 2025-11-28 01:24:26,867 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:24:27] 2025-11-28 01:24:26,911 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:24:27]  *** Error codes and diagnostics ***
[2025-11-27 20:24:27]     "exeErrorCode": 0,
[2025-11-27 20:24:27]     "exeErrorDiag": "",
[2025-11-27 20:24:27]     "pilotErrorCode": 0,
[2025-11-27 20:24:27]     "pilotErrorDiag": "",
[2025-11-27 20:24:27]  *** Listing of results directory ***
[2025-11-27 20:24:27] total 1323228
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 20:24:27] -rwx------. 1 boincer umatlas     36292 Nov 25 01:57 runpilot2-wrapper.sh
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:57 queuedata.json
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:24:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:13 run_atlas
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:13 job.xml
[2025-11-27 20:24:27] -rw-r--r--. 2 boincer umatlas 409411729 Nov 26 19:13 EVNT.47483658._002128.pool.root.1
[2025-11-27 20:24:27] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 19:13 input.tar.gz
[2025-11-27 20:24:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:13 start_atlas.sh
[2025-11-27 20:24:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:13 shared
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:13 boinc_lockfile
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 19:13 pandaJob.out
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas        57 Nov 26 19:13 setup.sh.local
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas    991538 Nov 26 19:14 agis_schedconf.cvmfs.json
[2025-11-27 20:24:27] drwx------. 5 boincer umatlas      4096 Nov 26 19:14 pilot3
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:51 boinc_task_state.xml
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas      6710 Nov 27 20:19 init_data.xml
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas 914677356 Nov 27 20:21 HITS.47556161._001119.pool.root.1
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas      1070 Nov 27 20:22 memory_monitor_summary.json
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:22 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas   2568857 Nov 27 20:23 log.47556161._001119.job.log.tgz.1
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas        95 Nov 27 20:23 pilot_heartbeat.json
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas      8643 Nov 27 20:23 heartbeat.json
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas      4824 Nov 27 20:24 pilotlog.txt
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas  10914205 Nov 27 20:24 log.47556161._001119.job.log.1
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas       353 Nov 27 20:24 output.list
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:24 runtime_log
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas  13506560 Nov 27 20:24 result.tar.gz
[2025-11-27 20:24:27] -rw-------. 1 boincer umatlas       662 Nov 27 20:24 xLbMDmtA2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4DMKDm1kIpMn.diag
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 20:24 runtime_log.err
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:24 wrapper_checkpoint.txt
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas     21785 Nov 27 20:24 stderr.txt
[2025-11-27 20:24:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:24 boinc_mmap_file
[2025-11-27 20:24:28] HITS file was successfully produced:
[2025-11-27 20:24:28] -rw-------. 1 boincer umatlas 914677356 Nov 27 20:21 shared/HITS.pool.root.1
[2025-11-27 20:24:28]  *** Contents of shared directory: ***
[2025-11-27 20:24:28] total 1306856
[2025-11-27 20:24:28] -rw-r--r--. 2 boincer umatlas 409411729 Nov 26 19:13 ATLAS.root_0
[2025-11-27 20:24:28] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 19:13 input.tar.gz
[2025-11-27 20:24:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:13 start_atlas.sh
[2025-11-27 20:24:28] -rw-------. 1 boincer umatlas 914677356 Nov 27 20:21 HITS.pool.root.1
[2025-11-27 20:24:28] -rw-------. 1 boincer umatlas  13506560 Nov 27 20:24 result.tar.gz
20:24:49 (3768072): run_atlas exited; CPU time 297778.268553
20:24:49 (3768072): called boinc_finish(0)

</stderr_txt>
]]>

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