Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:54 (2121416): wrapper (7.7.26015): starting
00:03:54 (2121416): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:03:54] Arguments: --nthreads 8
[2025-11-26 00:03:54] Threads: 8
[2025-11-26 00:03:54] Checking for CVMFS
[2025-11-26 00:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:55] 2.13.2.0 6529 33322 461384 153309 3 134 31010413 40960001 17650 16776704 0 73628754 99.574 83265938 39749 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:03:55] CVMFS is ok
[2025-11-26 00:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:55] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:55] Checking for apptainer binary...
[2025-11-26 00:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:55] Running /usr/bin/apptainer --version
[2025-11-26 00:03:55] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:56] c-206-36.aglt2.org
[2025-11-26 00:03:56] apptainer works
[2025-11-26 00:03:56] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:03:56] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:03:56] Starting ATLAS job with PandaID=6896714111
[2025-11-26 00:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:33:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:33:15] 2025-11-28 03:32:27,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:33:15] 2025-11-28 03:32:27,860 | INFO     | time since job start (167257s) is within the limit (172800.0s)
[2025-11-27 22:33:15] 2025-11-28 03:32:29,866 | INFO     | time since job start (167259s) is within the limit (172800.0s)
[2025-11-27 22:33:15] 2025-11-28 03:32:30,115 | INFO     | monitor loop #10314: job 0:6896714111 is in state 'finished'
[2025-11-27 22:33:15] 2025-11-28 03:32:30,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:33:15] 2025-11-28 03:32:31,873 | INFO     | time since job start (167261s) is within the limit (172800.0s)
[2025-11-27 22:33:15] 2025-11-28 03:32:32,626 | INFO     | monitor loop #10315: job 0:6896714111 is in state 'finished'
[2025-11-27 22:33:15] 2025-11-28 03:32:32,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:33:15] 2025-11-28 03:32:33,884 | INFO     | time since job start (167263s) is within the limit (172800.0s)
[2025-11-27 22:33:15] 2025-11-28 03:32:35,136 | INFO     | monitor loop #10316: job 0:6896714111 is in state 'finished'
[2025-11-27 22:33:15] 2025-11-28 03:32:35,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:33:15] 2025-11-28 03:32:35,358 | INFO     | PID=2134204 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 22:33:15] 2025-11-28 03:32:35,358 | INFO     | .. there are 16 such processes running
[2025-11-27 22:33:15] 2025-11-28 03:32:36,359 | INFO     | time since job start (167266s) is within the limit (172800.0s)
[2025-11-27 22:33:15] 2025-11-28 03:32:37,281 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 22:33:15] 2025-11-28 03:32:37,286 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3196.4983593750003
[2025-11-27 22:33:15] 2025-11-28 03:32:37,297 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6896714111/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:33:15] 2025-11-28 03:32:37,297 | INFO     | extracted standard info from prmon json
[2025-11-27 22:33:15] 2025-11-28 03:32:37,297 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:33:15] 2025-11-28 03:32:37,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:33:15] 2025-11-28 03:32:37,336 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:33:15] 2025-11-28 03:32:37,339 | INFO     | sum of square deviations: 6377967520079.529
[2025-11-27 22:33:15] 2025-11-28 03:32:37,505 | INFO     | sum of deviations: 25659623926961.637
[2025-11-27 22:33:15] 2025-11-28 03:32:37,505 | INFO     | mean x: 1764217148.741241
[2025-11-27 22:33:15] 2025-11-28 03:32:37,505 | INFO     | mean y: 2871895.2040145984
[2025-11-27 22:33:15] 2025-11-28 03:32:37,505 | INFO     | intersect: -7094867066.256281
[2025-11-27 22:33:15] 2025-11-28 03:32:37,507 | INFO     | chi2: 16.776102386181446
[2025-11-27 22:33:15] 2025-11-28 03:32:37,510 | INFO     | sum of square deviations: 6343117364488.393
[2025-11-27 22:33:15] 2025-11-28 03:32:37,663 | INFO     | monitor loop #10317: job 0:6896714111 is in state 'finished'
[2025-11-27 22:33:15] 2025-11-28 03:32:37,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:33:15] 2025-11-28 03:32:37,941 | INFO     | sum of deviations: 26365231414671.92
[2025-11-27 22:33:15] 2025-11-28 03:32:37,941 | INFO     | mean x: 1764216996.2541134
[2025-11-27 22:33:15] 2025-11-28 03:32:37,942 | INFO     | mean y: 2874981.853382084
[2025-11-27 22:33:15] 2025-11-28 03:32:37,942 | INFO     | intersect: -7330110788.257573
[2025-11-27 22:33:15] 2025-11-28 03:32:37,944 | INFO     | chi2: 14.665882722993645
[2025-11-27 22:33:15] 2025-11-28 03:32:37,944 | INFO     | current chi2=14.665882722993645 (change=12.578724274632458 %)
[2025-11-27 22:33:15] 2025-11-28 03:32:37,944 | INFO     | right removable region: 2734
[2025-11-27 22:33:15] 2025-11-28 03:32:37,946 | INFO     | sum of square deviations: 6343105428726.876
[2025-11-27 22:33:15] 2025-11-28 03:32:38,096 | INFO     | sum of deviations: 24613319811831.223
[2025-11-27 22:33:15] 2025-11-28 03:32:38,096 | INFO     | mean x: 1764217301.254479
[2025-11-27 22:33:15] 2025-11-28 03:32:38,096 | INFO     | mean y: 2876472.2855575867
[2025-11-27 22:33:15] 2025-11-28 03:32:38,096 | INFO     | intersect: -6842862596.891124
[2025-11-27 22:33:15] 2025-11-28 03:32:38,099 | INFO     | chi2: 12.992897800183265
[2025-11-27 22:33:15] 2025-11-28 03:32:38,099 | INFO     | current chi2=12.992897800183265 (change=22.551153414004105 %)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,099 | INFO     | left removable region: 10
[2025-11-27 22:33:15] 2025-11-28 03:32:38,101 | INFO     | sum of square deviations: 6266870642352.219
[2025-11-27 22:33:15] 2025-11-28 03:32:38,242 | INFO     | sum of deviations: 24363140367247.496
[2025-11-27 22:33:15] 2025-11-28 03:32:38,242 | INFO     | mean x: 1764217270.7834067
[2025-11-27 22:33:15] 2025-11-28 03:32:38,242 | INFO     | mean y: 2884319.4126284877
[2025-11-27 22:33:15] 2025-11-28 03:32:38,242 | INFO     | intersect: -6855701960.626739
[2025-11-27 22:33:15] 2025-11-28 03:32:38,244 | INFO     | chi2: 7.278111850993027
[2025-11-27 22:33:15] 2025-11-28 03:32:38,245 | INFO     | current memory leak: 3.89 B/s (using 2724 data points, chi2=7.28)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | could have reported an average CPU frequency of 3198 MHz (94 samples)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | ..............................
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . Timing measurements:
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . get job = 0 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . initial setup = 3 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . payload setup = 36 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . stage-in = 0 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . payload execution = 167148 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . stage-out = 9 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | . log creation = 1 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,247 | INFO     | ..............................
[2025-11-27 22:33:15] 2025-11-28 03:32:38,323 | INFO     | 
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | job summary report
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | --------------------------------------------------
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | PanDA job id: 6896714111
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | task id: 47556161
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | errors: (none)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | pilot state: finished 
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | transexitcode: 0
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | exeerrorcode: 0
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | exeerrordiag: 
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | exitcode: 0
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | exitmsg: OK
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | cpuconsumptiontime: 209435 s
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | nevents: 1000
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | neventsw: 0
[2025-11-27 22:33:15] 2025-11-28 03:32:38,324 | INFO     | pid: 2168725
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | pgrp: 2168725
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | corecount: 8
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | event service: False
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | sizes: {0: 2284087, 1: 2284286, 12: 2284286, 22: 2284314, 23: 2284604, 33: 2284632, 167186: 2388404, 167197: 2397398, 167198: 2397454, 167210: 2397700}
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | --------------------------------------------------
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | 
[2025-11-27 22:33:15] 2025-11-28 03:32:38,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 22:33:15] 2025-11-28 03:32:38,372 | INFO     | time since job start (167268s) is within the limit (172800.0s)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:33:15] 2025-11-28 03:32:38,394 | INFO     | job 6896714111 has completed (purged errors)
[2025-11-27 22:33:15] 2025-11-28 03:32:38,394 | INFO     | overall cleanup function is called
[2025-11-27 22:33:15] 2025-11-28 03:32:39,413 | INFO     | --- collectZombieJob: --- 10, [2168725]
[2025-11-27 22:33:15] 2025-11-28 03:32:39,413 | INFO     | zombie collector waiting for pid 2168725
[2025-11-27 22:33:15] 2025-11-28 03:32:39,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:33:15] 2025-11-28 03:32:39,413 | INFO     | collected zombie processes
[2025-11-27 22:33:15] 2025-11-28 03:32:39,413 | INFO     | will attempt to kill all subprocesses of pid=2168725
[2025-11-27 22:33:15] 2025-11-28 03:32:39,715 | INFO     | process IDs to be killed: [2168725] (in reverse order)
[2025-11-27 22:33:15] 2025-11-28 03:32:39,816 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:33:15] 2025-11-28 03:32:39,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:33:15] 2025-11-28 03:32:39,828 | INFO     | did not find any defunct processes belonging to 2168725
[2025-11-27 22:33:15] 2025-11-28 03:32:39,838 | INFO     | did not find any defunct processes belonging to 2168725
[2025-11-27 22:33:15] 2025-11-28 03:32:39,839 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:33:15] 2025-11-28 03:32:39,839 | INFO     | ready for new job
[2025-11-27 22:33:15] 2025-11-28 03:32:39,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:33:15] 2025-11-28 03:32:39,850 | INFO     | ***************************************
[2025-11-27 22:33:15] 2025-11-28 03:32:39,850 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:33:15] 2025-11-28 03:32:39,850 | INFO     | ***************************************
[2025-11-27 22:33:15] 2025-11-28 03:32:39,850 | INFO     | 
[2025-11-27 22:33:15] 2025-11-28 03:32:39,854 | INFO     | architecture information:
[2025-11-27 22:33:15] 2025-11-28 03:32:39,854 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:33:15] 2025-11-28 03:32:39,871 | INFO     | cat /etc/os-release:
[2025-11-27 22:33:15] NAME="CentOS Linux"
[2025-11-27 22:33:15] VERSION="7 (Core)"
[2025-11-27 22:33:15] ID="centos"
[2025-11-27 22:33:15] ID_LIKE="rhel fedora"
[2025-11-27 22:33:15] VERSION_ID="7"
[2025-11-27 22:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:33:15] ANSI_COLOR="0;31"
[2025-11-27 22:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:33:15] HOME_URL="https://www.centos.org/"
[2025-11-27 22:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:33:15] 
[2025-11-27 22:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:33:15] 
[2025-11-27 22:33:15] 2025-11-28 03:32:39,871 | INFO     | ***************************************
[2025-11-27 22:33:15] 2025-11-28 03:32:40,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 22:33:15] 2025-11-28 03:32:40,504 | INFO     | sufficient remaining disk space (83118522368 B)
[2025-11-27 22:33:15] 2025-11-28 03:32:40,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:33:15] 2025-11-28 03:32:40,504 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:33:15] 2025-11-28 03:32:40,504 | INFO     | update_server=False
[2025-11-27 22:33:15] 2025-11-28 03:32:40,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:33:15] 2025-11-28 03:32:40,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:33:15] 2025-11-28 03:32:40,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:33:15] 2025-11-28 03:32:40,966 | INFO     | all payload control threads have been joined
[2025-11-27 22:33:15] 2025-11-28 03:32:41,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:33:15] 2025-11-28 03:32:41,177 | INFO     | aborting loop
[2025-11-27 22:33:15] 2025-11-28 03:32:41,224 | INFO     | all job control threads have been joined
[2025-11-27 22:33:15] 2025-11-28 03:32:41,368 | INFO     | all data control threads have been joined
[2025-11-27 22:33:15] 2025-11-28 03:32:41,511 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:41,983 | INFO     | [payload] control thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,183 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,191 | INFO     | [job] validate thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,196 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,231 | INFO     | [job] control thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,375 | INFO     | [data] control thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,439 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,445 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,560 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,702 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,772 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:42,967 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:43,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:33:15] 2025-11-28 03:32:44,342 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:44,632 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:33:15] 2025-11-28 03:32:56,396 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:33:15] 2025-11-28 03:32:57,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467026585408)>', '<ExcThread(monitor, started 140466167215872)>']
[2025-11-27 22:33:15] 2025-11-28 03:33:02,644 | INFO     | all workflow threads have been joined
[2025-11-27 22:33:15] 2025-11-28 03:33:02,644 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:33:15] 2025-11-28 03:33:02,644 | INFO     | traces error code: 0
[2025-11-27 22:33:15] 2025-11-28 03:33:02,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:33:15] 2025-11-28 03:33:13,566 | INFO     | PID=2134204 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:33:15] 2025-11-28 03:33:13,566 | INFO     | .. there are 17 such processes running
[2025-11-27 22:33:15] 2025-11-28 03:33:13,571 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:33:15] 2025-11-28 03:33:13,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:33:15] 2025-11-28 03:33:13,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:33:15] 2025-11-28 03:33:13,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:33:15] 2025-11-28 03:33:13,572 | INFO     | [monitor] control thread has ended
[2025-11-27 22:33:15] 2025-11-28 03:33:14,172 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:33:15] 2025-11-28 03:33:14,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:33:15] 2025-11-28 03:33:14,247 [wrapper] pilotpid: 2134204
[2025-11-27 22:33:15] 2025-11-28 03:33:14,305 [wrapper] Pilot exit status: 0
[2025-11-27 22:33:15] 2025-11-28 03:33:14,435 [wrapper] pandaids: 6896714111
[2025-11-27 22:33:15] 2025-11-28 03:33:14,632 [wrapper] cleanup supervisor_pilot 1144248 2134205
[2025-11-27 22:33:15] 2025-11-28 03:33:14,655 [wrapper] Test setup, not cleaning
[2025-11-27 22:33:15] 2025-11-28 03:33:14,659 [wrapper] apfmon messages muted
[2025-11-27 22:33:15] 2025-11-28 03:33:14,661 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:33:15] 2025-11-28 03:33:14,672 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:33:15]  *** Error codes and diagnostics ***
[2025-11-27 22:33:15]     "exeErrorCode": 0,
[2025-11-27 22:33:15]     "exeErrorDiag": "",
[2025-11-27 22:33:15]     "pilotErrorCode": 0,
[2025-11-27 22:33:15]     "pilotErrorDiag": "",
[2025-11-27 22:33:15]  *** Listing of results directory ***
[2025-11-27 22:33:15] total 1345988
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 22:33:15] -rwx------. 1 boincer umatlas     36292 Nov 25 01:33 runpilot2-wrapper.sh
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:33 queuedata.json
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:33:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-27 22:33:15] -rw-r--r--. 2 boincer umatlas 407741440 Nov 26 00:03 EVNT.47483658._002121.pool.root.1
[2025-11-27 22:33:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-27 22:33:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-27 22:33:15] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:03 input.tar.gz
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas      2782 Nov 26 00:03 pandaJob.out
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas        57 Nov 26 00:03 setup.sh.local
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-27 22:33:15] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas       533 Nov 27 22:23 boinc_task_state.xml
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas      6902 Nov 27 22:28 init_data.xml
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas 916517963 Nov 27 22:31 HITS.47556161._001041.pool.root.1
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas      1059 Nov 27 22:32 memory_monitor_summary.json
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas   1516240 Nov 27 22:32 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas   3460411 Nov 27 22:32 log.47556161._001041.job.log.tgz.1
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas      8587 Nov 27 22:32 heartbeat.json
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas        95 Nov 27 22:33 pilot_heartbeat.json
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas       823 Nov 27 22:33 pilotlog.txt
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas  21592975 Nov 27 22:33 log.47556161._001041.job.log.1
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 22:33 boinc_mmap_file
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas        29 Nov 27 22:33 wrapper_checkpoint.txt
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas       353 Nov 27 22:33 output.list
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas       620 Nov 27 22:33 runtime_log
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas  25077760 Nov 27 22:33 result.tar.gz
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas       668 Nov 27 22:33 yZJLDmVn1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqCMKDmrEz2yn.diag
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 22:33 runtime_log.err
[2025-11-27 22:33:15] -rw-r--r--. 1 boincer umatlas     21897 Nov 27 22:33 stderr.txt
[2025-11-27 22:33:15] HITS file was successfully produced:
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas 916517963 Nov 27 22:31 shared/HITS.pool.root.1
[2025-11-27 22:33:15]  *** Contents of shared directory: ***
[2025-11-27 22:33:15] total 1318324
[2025-11-27 22:33:15] -rw-r--r--. 2 boincer umatlas 407741440 Nov 26 00:03 ATLAS.root_0
[2025-11-27 22:33:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-27 22:33:15] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:03 input.tar.gz
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas 916517963 Nov 27 22:31 HITS.pool.root.1
[2025-11-27 22:33:15] -rw-------. 1 boincer umatlas  25077760 Nov 27 22:33 result.tar.gz
22:33:16 (2121416): run_atlas exited; CPU time 209806.095060
22:33:16 (2121416): called boinc_finish(0)

</stderr_txt>
]]>

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