Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:39 (2446631): wrapper (7.7.26015): starting
00:02:39 (2446631): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:02:39] Arguments: --nthreads 8
[2025-11-26 00:02:39] Threads: 8
[2025-11-26 00:02:39] Checking for CVMFS
[2025-11-26 00:02:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:02:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:02:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:02:40] 2.13.2.0 6307 32449 295568 153309 3 278 30880815 40960000 12851 16776704 0 48770521 99.735 29026945 38841 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:02:40] CVMFS is ok
[2025-11-26 00:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:02:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:02:40] Further information can be found at the LHC@home message board.
[2025-11-26 00:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:02:40] Checking for apptainer binary...
[2025-11-26 00:02:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:02:40] Running /usr/bin/apptainer --version
[2025-11-26 00:02:40] apptainer version 1.4.4-1.el9
[2025-11-26 00:02:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:02:40] c-206-39.aglt2.org
[2025-11-26 00:02:40] apptainer works
[2025-11-26 00:02:40] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:02:40] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:02:41] Starting ATLAS job with PandaID=6896714962
[2025-11-26 00:02:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:11:05]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:11:05] 2025-11-27 22:10:16,693 | INFO     | time since job start (147959s) is within the limit (172800.0s)
[2025-11-27 17:11:05] 2025-11-27 22:10:16,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 17:11:05] 2025-11-27 22:10:18,701 | INFO     | time since job start (147961s) is within the limit (172800.0s)
[2025-11-27 17:11:05] 2025-11-27 22:10:18,942 | INFO     | monitor loop #8577: job 0:6896714962 is in state 'finished'
[2025-11-27 17:11:05] 2025-11-27 22:10:18,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:11:05] 2025-11-27 22:10:20,707 | INFO     | time since job start (147963s) is within the limit (172800.0s)
[2025-11-27 17:11:05] 2025-11-27 22:10:21,446 | INFO     | monitor loop #8578: job 0:6896714962 is in state 'finished'
[2025-11-27 17:11:05] 2025-11-27 22:10:21,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:11:05] 2025-11-27 22:10:22,713 | INFO     | time since job start (147965s) is within the limit (172800.0s)
[2025-11-27 17:11:05] 2025-11-27 22:10:23,952 | INFO     | monitor loop #8579: job 0:6896714962 is in state 'finished'
[2025-11-27 17:11:05] 2025-11-27 22:10:23,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:11:05] 2025-11-27 22:10:24,720 | INFO     | time since job start (147967s) is within the limit (172800.0s)
[2025-11-27 17:11:05] 2025-11-27 22:10:26,456 | INFO     | monitor loop #8580: job 0:6896714962 is in state 'finished'
[2025-11-27 17:11:05] 2025-11-27 22:10:26,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:11:05] 2025-11-27 22:10:26,726 | INFO     | time since job start (147969s) is within the limit (172800.0s)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,114 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 17:11:05] 2025-11-27 22:10:28,118 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3205.8834374999997
[2025-11-27 17:11:05] 2025-11-27 22:10:28,128 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6896714962/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,129 | INFO     | extracted standard info from prmon json
[2025-11-27 17:11:05] 2025-11-27 22:10:28,129 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:11:05] 2025-11-27 22:10:28,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:11:05] 2025-11-27 22:10:28,162 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:11:05] 2025-11-27 22:10:28,164 | INFO     | sum of square deviations: 4405485593655.49
[2025-11-27 17:11:05] 2025-11-27 22:10:28,273 | INFO     | sum of deviations: 16600920238717.467
[2025-11-27 17:11:05] 2025-11-27 22:10:28,273 | INFO     | mean x: 1764207520.3682907
[2025-11-27 17:11:05] 2025-11-27 22:10:28,273 | INFO     | mean y: 2892500.6552436003
[2025-11-27 17:11:05] 2025-11-27 22:10:28,273 | INFO     | intersect: -6645062124.904655
[2025-11-27 17:11:05] 2025-11-27 22:10:28,275 | INFO     | chi2: 26.24742928324206
[2025-11-27 17:11:05] 2025-11-27 22:10:28,278 | INFO     | sum of square deviations: 4378259378671.764
[2025-11-27 17:11:05] 2025-11-27 22:10:28,388 | INFO     | sum of deviations: 17434400864153.373
[2025-11-27 17:11:05] 2025-11-27 22:10:28,388 | INFO     | mean x: 1764207367.8742242
[2025-11-27 17:11:05] 2025-11-27 22:10:28,388 | INFO     | mean y: 2897169.4257343817
[2025-11-27 17:11:05] 2025-11-27 22:10:28,389 | INFO     | intersect: -7022245883.735078
[2025-11-27 17:11:05] 2025-11-27 22:10:28,390 | INFO     | chi2: 22.972027387984635
[2025-11-27 17:11:05] 2025-11-27 22:10:28,391 | INFO     | current chi2=22.972027387984635 (change=12.478943594482368 %)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,391 | INFO     | right removable region: 2416
[2025-11-27 17:11:05] 2025-11-27 22:10:28,393 | INFO     | sum of square deviations: 4378255141001.758
[2025-11-27 17:11:05] 2025-11-27 22:10:28,484 | INFO     | sum of deviations: 15565904516150.596
[2025-11-27 17:11:05] 2025-11-27 22:10:28,484 | INFO     | mean x: 1764207672.8742242
[2025-11-27 17:11:05] 2025-11-27 22:10:28,484 | INFO     | mean y: 2898297.150186181
[2025-11-27 17:11:05] 2025-11-27 22:10:28,484 | INFO     | intersect: -6269346535.145528
[2025-11-27 17:11:05] 2025-11-27 22:10:28,486 | INFO     | chi2: 21.498702777576742
[2025-11-27 17:11:05] 2025-11-27 22:10:28,486 | INFO     | current chi2=21.498702777576742 (change=18.092158490725758 %)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,486 | INFO     | left removable region: 10
[2025-11-27 17:11:05] 2025-11-27 22:10:28,487 | INFO     | sum of square deviations: 4318748917856.519
[2025-11-27 17:11:05] 2025-11-27 22:10:28,597 | INFO     | sum of deviations: 15626505963433.564
[2025-11-27 17:11:05] 2025-11-27 22:10:28,597 | INFO     | mean x: 1764207642.3865337
[2025-11-27 17:11:05] 2025-11-27 22:10:28,597 | INFO     | mean y: 2909148.198254364
[2025-11-27 17:11:05] 2025-11-27 22:10:28,597 | INFO     | intersect: -6380513868.245819
[2025-11-27 17:11:05] 2025-11-27 22:10:28,599 | INFO     | chi2: 13.847067409564477
[2025-11-27 17:11:05] 2025-11-27 22:10:28,599 | INFO     | current memory leak: 3.62 B/s (using 2406 data points, chi2=13.85)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,601 | INFO     | could have reported an average CPU frequency of 3223 MHz (83 samples)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,601 | INFO     | ..............................
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . Timing measurements:
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . get job = 1 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . initial setup = 6 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . payload setup = 73 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . stage-in = 1 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . payload execution = 147768 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . stage-out = 4 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | . log creation = 1 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,602 | INFO     | ..............................
[2025-11-27 17:11:05] 2025-11-27 22:10:28,683 | INFO     | 
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | job summary report
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | --------------------------------------------------
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | PanDA job id: 6896714962
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | task id: 47556173
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | errors: (none)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | pilot state: finished 
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | transexitcode: 0
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | exeerrorcode: 0
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | exeerrordiag: 
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | exitcode: 0
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | exitmsg: OK
[2025-11-27 17:11:05] 2025-11-27 22:10:28,684 | INFO     | cpuconsumptiontime: 212282 s
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | nevents: 1000
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | neventsw: 0
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | pid: 2510506
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | pgrp: 2510506
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | corecount: 8
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | event service: False
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | sizes: {0: 2284313, 12: 2284313, 23: 2284341, 35: 2274154, 36: 2284659, 46: 2284687, 147846: 2378881, 147851: 2387875, 147853: 2387931, 147869: 2388177}
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | --------------------------------------------------
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | 
[2025-11-27 17:11:05] 2025-11-27 22:10:28,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | job 6896714962 has completed (purged errors)
[2025-11-27 17:11:05] 2025-11-27 22:10:28,711 | INFO     | overall cleanup function is called
[2025-11-27 17:11:05] 2025-11-27 22:10:29,737 | INFO     | --- collectZombieJob: --- 10, [2510506]
[2025-11-27 17:11:05] 2025-11-27 22:10:29,737 | INFO     | zombie collector waiting for pid 2510506
[2025-11-27 17:11:05] 2025-11-27 22:10:29,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:11:05] 2025-11-27 22:10:29,737 | INFO     | collected zombie processes
[2025-11-27 17:11:05] 2025-11-27 22:10:29,737 | INFO     | will attempt to kill all subprocesses of pid=2510506
[2025-11-27 17:11:05] 2025-11-27 22:10:30,392 | INFO     | process IDs to be killed: [2510506] (in reverse order)
[2025-11-27 17:11:05] 2025-11-27 22:10:30,516 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:11:05] 2025-11-27 22:10:30,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:11:05] 2025-11-27 22:10:30,530 | INFO     | did not find any defunct processes belonging to 2510506
[2025-11-27 17:11:05] 2025-11-27 22:10:30,542 | INFO     | did not find any defunct processes belonging to 2510506
[2025-11-27 17:11:05] 2025-11-27 22:10:30,543 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:11:05] 2025-11-27 22:10:30,544 | INFO     | ready for new job
[2025-11-27 17:11:05] 2025-11-27 22:10:30,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:11:05] 2025-11-27 22:10:30,554 | INFO     | ***************************************
[2025-11-27 17:11:05] 2025-11-27 22:10:30,554 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:11:05] 2025-11-27 22:10:30,554 | INFO     | ***************************************
[2025-11-27 17:11:05] 2025-11-27 22:10:30,554 | INFO     | 
[2025-11-27 17:11:05] 2025-11-27 22:10:30,557 | INFO     | architecture information:
[2025-11-27 17:11:05] 2025-11-27 22:10:30,558 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:11:05] 2025-11-27 22:10:30,667 | INFO     | cat /etc/os-release:
[2025-11-27 17:11:05] NAME="CentOS Linux"
[2025-11-27 17:11:05] VERSION="7 (Core)"
[2025-11-27 17:11:05] ID="centos"
[2025-11-27 17:11:05] ID_LIKE="rhel fedora"
[2025-11-27 17:11:05] VERSION_ID="7"
[2025-11-27 17:11:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:11:05] ANSI_COLOR="0;31"
[2025-11-27 17:11:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:11:05] HOME_URL="https://www.centos.org/"
[2025-11-27 17:11:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:11:05] 
[2025-11-27 17:11:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:11:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:11:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:11:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:11:05] 
[2025-11-27 17:11:05] 2025-11-27 22:10:30,667 | INFO     | ***************************************
[2025-11-27 17:11:05] 2025-11-27 22:10:31,170 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 17:11:05] 2025-11-27 22:10:31,187 | INFO     | sufficient remaining disk space (77951139840 B)
[2025-11-27 17:11:05] 2025-11-27 22:10:31,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:11:05] 2025-11-27 22:10:31,187 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:11:05] 2025-11-27 22:10:31,188 | INFO     | update_server=False
[2025-11-27 17:11:05] 2025-11-27 22:10:31,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:11:05] 2025-11-27 22:10:31,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:11:05] 2025-11-27 22:10:31,251 | INFO     | all payload control threads have been joined
[2025-11-27 17:11:05] 2025-11-27 22:10:31,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 17:11:05] 2025-11-27 22:10:31,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 17:11:05] 2025-11-27 22:10:31,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:11:05] 2025-11-27 22:10:31,475 | INFO     | will abort loop
[2025-11-27 17:11:05] 2025-11-27 22:10:31,565 | INFO     | all job control threads have been joined
[2025-11-27 17:11:05] 2025-11-27 22:10:31,982 | INFO     | all data control threads have been joined
[2025-11-27 17:11:05] 2025-11-27 22:10:32,192 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,256 | INFO     | [payload] control thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,416 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,481 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,572 | INFO     | [job] control thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:11:05] 2025-11-27 22:10:32,697 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,761 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,887 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,892 | INFO     | [job] validate thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:32,995 | INFO     | [data] control thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:33,094 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:33,194 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:33,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:33,550 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:33,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:11:05] 2025-11-27 22:10:34,704 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:36,692 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:11:05] 2025-11-27 22:10:58,087 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:11:05] 2025-11-27 22:11:00,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377110079296)>', '<ExcThread(monitor, started 140376232945408)>']
[2025-11-27 17:11:05] 2025-11-27 22:11:00,318 | INFO     | PID=2460977 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:11:05] 2025-11-27 22:11:00,318 | INFO     | .. there are 13 such processes running
[2025-11-27 17:11:05] 2025-11-27 22:11:00,318 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:11:05] 2025-11-27 22:11:00,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:11:05] 2025-11-27 22:11:00,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:11:05] 2025-11-27 22:11:00,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:11:05] 2025-11-27 22:11:00,319 | INFO     | [monitor] control thread has ended
[2025-11-27 17:11:05] 2025-11-27 22:11:05,160 | INFO     | all workflow threads have been joined
[2025-11-27 17:11:05] 2025-11-27 22:11:05,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:11:05] 2025-11-27 22:11:05,161 | INFO     | traces error code: 0
[2025-11-27 17:11:05] 2025-11-27 22:11:05,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:11:05] 2025-11-27 22:11:05,502 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:11:05] 2025-11-27 22:11:05,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:11:05] 2025-11-27 22:11:05,506 [wrapper] pilotpid: 2460977
[2025-11-27 17:11:05] 2025-11-27 22:11:05,507 [wrapper] Pilot exit status: 0
[2025-11-27 17:11:05] 2025-11-27 22:11:05,515 [wrapper] pandaids: 6896714962
[2025-11-27 17:11:05] 2025-11-27 22:11:05,581 [wrapper] cleanup supervisor_pilot  207448 2460978
[2025-11-27 17:11:05] 2025-11-27 22:11:05,584 [wrapper] Test setup, not cleaning
[2025-11-27 17:11:05] 2025-11-27 22:11:05,586 [wrapper] apfmon messages muted
[2025-11-27 17:11:05] 2025-11-27 22:11:05,587 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:11:05] 2025-11-27 22:11:05,589 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:11:05]  *** Error codes and diagnostics ***
[2025-11-27 17:11:05]     "exeErrorCode": 0,
[2025-11-27 17:11:05]     "exeErrorDiag": "",
[2025-11-27 17:11:05]     "pilotErrorCode": 0,
[2025-11-27 17:11:05]     "pilotErrorDiag": "",
[2025-11-27 17:11:05]  *** Listing of results directory ***
[2025-11-27 17:11:05] total 1355128
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:50 queuedata.json
[2025-11-27 17:11:05] -rwx------. 1 boincer umatlas     36292 Nov 25 01:54 runpilot2-wrapper.sh
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:11:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:02 run_atlas
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:02 job.xml
[2025-11-27 17:11:05] -rw-r--r--. 2 boincer umatlas 410858736 Nov 26 00:02 EVNT.47483658._003071.pool.root.1
[2025-11-27 17:11:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:02 start_atlas.sh
[2025-11-27 17:11:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:02 shared
[2025-11-27 17:11:05] -rw-r--r--. 2 boincer umatlas    590093 Nov 26 00:02 input.tar.gz
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:02 boinc_lockfile
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:02 pandaJob.out
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas        57 Nov 26 00:02 setup.sh.local
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-27 17:11:05] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas       533 Nov 27 16:38 boinc_task_state.xml
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas      6903 Nov 27 17:01 init_data.xml
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas 929816224 Nov 27 17:09 HITS.47556173._000532.pool.root.1
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas      1065 Nov 27 17:10 memory_monitor_summary.json
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:10 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas   3155755 Nov 27 17:10 log.47556173._000532.job.log.tgz.1
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas        95 Nov 27 17:10 pilot_heartbeat.json
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas      8628 Nov 27 17:10 heartbeat.json
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:11 boinc_mmap_file
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:11 wrapper_checkpoint.txt
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas      5010 Nov 27 17:11 pilotlog.txt
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas  18372977 Nov 27 17:11 log.47556173._000532.job.log.1
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas       353 Nov 27 17:11 output.list
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:11 runtime_log
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas  21544960 Nov 27 17:11 result.tar.gz
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 17:11 runtime_log.err
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas       668 Nov 27 17:11 2QmLDmG71h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyDMKDmy2rbsm.diag
[2025-11-27 17:11:05] -rw-r--r--. 1 boincer umatlas     21889 Nov 27 17:11 stderr.txt
[2025-11-27 17:11:05] HITS file was successfully produced:
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas 929816224 Nov 27 17:09 shared/HITS.pool.root.1
[2025-11-27 17:11:05]  *** Contents of shared directory: ***
[2025-11-27 17:11:05] total 1330900
[2025-11-27 17:11:05] -rw-r--r--. 2 boincer umatlas 410858736 Nov 26 00:02 ATLAS.root_0
[2025-11-27 17:11:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:02 start_atlas.sh
[2025-11-27 17:11:05] -rw-r--r--. 2 boincer umatlas    590093 Nov 26 00:02 input.tar.gz
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas 929816224 Nov 27 17:09 HITS.pool.root.1
[2025-11-27 17:11:05] -rw-------. 1 boincer umatlas  21544960 Nov 27 17:11 result.tar.gz
17:11:06 (2446631): run_atlas exited; CPU time 213003.431582
17:11:06 (2446631): called boinc_finish(0)

</stderr_txt>
]]>

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