Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:53 (566631): wrapper (7.7.26015): starting
00:04:53 (566631): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:53] Arguments: --nthreads 9
[2025-11-26 00:04:53] Threads: 9
[2025-11-26 00:04:53] Checking for CVMFS
[2025-11-26 00:04:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:55] 2.13.3.0 42195 29466 349984 153309 1 367 24569241 32935937 24084 16776704 0 171847374 99.781 101502297 33254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:55] CVMFS is ok
[2025-11-26 00:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:55] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:55] Checking for apptainer binary...
[2025-11-26 00:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:55] Running /usr/bin/apptainer --version
[2025-11-26 00:04:55] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:56] c-6-3.aglt2.org
[2025-11-26 00:04:56] apptainer works
[2025-11-26 00:04:56] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:56] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:56] Starting ATLAS job with PandaID=6896714607
[2025-11-26 00:04:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:55:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:55:12] 2025-11-27 02:54:31,964 | INFO     | monitor loop #5145: job 0:6896714607 is in state 'finished'
[2025-11-26 21:55:12] 2025-11-27 02:54:31,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,432 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 21:55:12] 2025-11-27 02:54:33,442 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2126000000003
[2025-11-26 21:55:12] 2025-11-27 02:54:33,449 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896714607/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,451 | INFO     | extracted standard info from prmon json
[2025-11-26 21:55:12] 2025-11-27 02:54:33,451 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:55:12] 2025-11-27 02:54:33,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:55:12] 2025-11-27 02:54:33,545 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:55:12] 2025-11-27 02:54:33,556 | INFO     | sum of square deviations: 657911759516.2107
[2025-11-26 21:55:12] 2025-11-27 02:54:33,568 | INFO     | time since job start (78526s) is within the limit (172800.0s)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,701 | INFO     | sum of deviations: 5393710977651.396
[2025-11-26 21:55:12] 2025-11-27 02:54:33,706 | INFO     | mean x: 1764172840.548638
[2025-11-26 21:55:12] 2025-11-27 02:54:33,706 | INFO     | mean y: 3051452.145525292
[2025-11-26 21:55:12] 2025-11-27 02:54:33,706 | INFO     | intersect: -14460040716.230862
[2025-11-26 21:55:12] 2025-11-27 02:54:33,708 | INFO     | chi2: 15.4212885211355
[2025-11-26 21:55:12] 2025-11-27 02:54:33,714 | INFO     | sum of square deviations: 650261953244.1675
[2025-11-26 21:55:12] 2025-11-27 02:54:33,768 | INFO     | sum of deviations: 5851657801360.808
[2025-11-26 21:55:12] 2025-11-27 02:54:33,769 | INFO     | mean x: 1764172688.0546875
[2025-11-26 21:55:12] 2025-11-27 02:54:33,769 | INFO     | mean y: 3060579.97265625
[2025-11-26 21:55:12] 2025-11-27 02:54:33,769 | INFO     | intersect: -15872595102.325212
[2025-11-26 21:55:12] 2025-11-27 02:54:33,771 | INFO     | chi2: 12.203808065457617
[2025-11-26 21:55:12] 2025-11-27 02:54:33,771 | INFO     | current chi2=12.203808065457617 (change=20.863888586665087 %)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,771 | INFO     | right removable region: 1279
[2025-11-26 21:55:12] 2025-11-27 02:54:33,773 | INFO     | sum of square deviations: 650260739344.1675
[2025-11-26 21:55:12] 2025-11-27 02:54:33,822 | INFO     | sum of deviations: 4864574085040.562
[2025-11-26 21:55:12] 2025-11-27 02:54:33,822 | INFO     | mean x: 1764172993.0546875
[2025-11-26 21:55:12] 2025-11-27 02:54:33,822 | INFO     | mean y: 3061997.2890625
[2025-11-26 21:55:12] 2025-11-27 02:54:33,823 | INFO     | intersect: -13194644252.35744
[2025-11-26 21:55:12] 2025-11-27 02:54:33,825 | INFO     | chi2: 11.537857180199742
[2025-11-26 21:55:12] 2025-11-27 02:54:33,825 | INFO     | current chi2=11.537857180199742 (change=25.18227536961881 %)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,826 | INFO     | sum of square deviations: 642669255172.0399
[2025-11-26 21:55:12] 2025-11-27 02:54:33,921 | INFO     | sum of deviations: 4372338129940.2617
[2025-11-26 21:55:12] 2025-11-27 02:54:33,921 | INFO     | mean x: 1764173145.5607843
[2025-11-26 21:55:12] 2025-11-27 02:54:33,921 | INFO     | mean y: 3071883.577254902
[2025-11-26 21:55:12] 2025-11-27 02:54:33,921 | INFO     | intersect: -11999309512.56901
[2025-11-26 21:55:12] 2025-11-27 02:54:33,927 | INFO     | chi2: 8.276008143095059
[2025-11-26 21:55:12] 2025-11-27 02:54:33,928 | INFO     | current chi2=8.276008143095059 (change=28.270839083555156 %)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,929 | INFO     | sum of square deviations: 635137151970.4435
[2025-11-26 21:55:12] 2025-11-27 02:54:33,979 | INFO     | sum of deviations: 4065967178385.721
[2025-11-26 21:55:12] 2025-11-27 02:54:33,979 | INFO     | mean x: 1764173298.0661418
[2025-11-26 21:55:12] 2025-11-27 02:54:33,979 | INFO     | mean y: 3078083.9913385827
[2025-11-26 21:55:12] 2025-11-27 02:54:33,980 | INFO     | intersect: -11290656985.147282
[2025-11-26 21:55:12] 2025-11-27 02:54:33,981 | INFO     | chi2: 7.106810329589342
[2025-11-26 21:55:12] 2025-11-27 02:54:33,982 | INFO     | current chi2=7.106810329589342 (change=14.127557552987863 %)
[2025-11-26 21:55:12] 2025-11-27 02:54:33,982 | INFO     | left removable region: 30
[2025-11-26 21:55:12] 2025-11-27 02:54:33,984 | INFO     | sum of square deviations: 604147414883.0991
[2025-11-26 21:55:12] 2025-11-27 02:54:34,027 | INFO     | sum of deviations: 4268853917328.984
[2025-11-26 21:55:12] 2025-11-27 02:54:34,027 | INFO     | mean x: 1764173572.5756605
[2025-11-26 21:55:12] 2025-11-27 02:54:34,027 | INFO     | mean y: 3096733.164131305
[2025-11-26 21:55:12] 2025-11-27 02:54:34,028 | INFO     | intersect: -12462402713.846006
[2025-11-26 21:55:12] 2025-11-27 02:54:34,030 | INFO     | chi2: 2.920829084057495
[2025-11-26 21:55:12] 2025-11-27 02:54:34,031 | INFO     | current memory leak: 7.07 B/s (using 1249 data points, chi2=2.92)
[2025-11-26 21:55:12] 2025-11-27 02:54:34,033 | INFO     | could have reported an average CPU frequency of 2600 MHz (46 samples)
[2025-11-26 21:55:12] 2025-11-27 02:54:34,033 | INFO     | ..............................
[2025-11-26 21:55:12] 2025-11-27 02:54:34,033 | INFO     | . Timing measurements:
[2025-11-26 21:55:12] 2025-11-27 02:54:34,033 | INFO     | . get job = 0 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,033 | INFO     | . initial setup = 6 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,034 | INFO     | . payload setup = 36 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,034 | INFO     | . stage-in = 0 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,034 | INFO     | . payload execution = 78391 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,034 | INFO     | . stage-out = 7 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,034 | INFO     | . log creation = 2 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,034 | INFO     | ..............................
[2025-11-26 21:55:12] 2025-11-27 02:54:34,179 | INFO     | 
[2025-11-26 21:55:12] 2025-11-27 02:54:34,179 | INFO     | job summary report
[2025-11-26 21:55:12] 2025-11-27 02:54:34,179 | INFO     | --------------------------------------------------
[2025-11-26 21:55:12] 2025-11-27 02:54:34,179 | INFO     | PanDA job id: 6896714607
[2025-11-26 21:55:12] 2025-11-27 02:54:34,179 | INFO     | task id: 47556161
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | errors: (none)
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | pilot state: finished 
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | transexitcode: 0
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | exeerrorcode: 0
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | exeerrordiag: 
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | exitcode: 0
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | exitmsg: OK
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | cpuconsumptiontime: 310038 s
[2025-11-26 21:55:12] 2025-11-27 02:54:34,180 | INFO     | nevents: 1000
[2025-11-26 21:55:12] 2025-11-27 02:54:34,181 | INFO     | neventsw: 0
[2025-11-26 21:55:12] 2025-11-27 02:54:34,181 | INFO     | pid: 584968
[2025-11-26 21:55:12] 2025-11-27 02:54:34,181 | INFO     | pgrp: 584968
[2025-11-26 21:55:12] 2025-11-27 02:54:34,181 | INFO     | corecount: 9
[2025-11-26 21:55:12] 2025-11-27 02:54:34,181 | INFO     | event service: False
[2025-11-26 21:55:12] 2025-11-27 02:54:34,182 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 27: 2284610, 34: 2284638, 78432: 2348021, 78433: 2348020, 78441: 2357126, 78463: 2357316}
[2025-11-26 21:55:12] 2025-11-27 02:54:34,182 | INFO     | --------------------------------------------------
[2025-11-26 21:55:12] 2025-11-27 02:54:34,182 | INFO     | 
[2025-11-26 21:55:12] 2025-11-27 02:54:34,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 21:55:12] 2025-11-27 02:54:34,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:55:12] 2025-11-27 02:54:34,223 | INFO     | job 6896714607 has completed (purged errors)
[2025-11-26 21:55:12] 2025-11-27 02:54:34,223 | INFO     | overall cleanup function is called
[2025-11-26 21:55:12] 2025-11-27 02:54:35,269 | INFO     | --- collectZombieJob: --- 10, [584968]
[2025-11-26 21:55:12] 2025-11-27 02:54:35,269 | INFO     | zombie collector waiting for pid 584968
[2025-11-26 21:55:12] 2025-11-27 02:54:35,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:55:12] 2025-11-27 02:54:35,269 | INFO     | collected zombie processes
[2025-11-26 21:55:12] 2025-11-27 02:54:35,269 | INFO     | will attempt to kill all subprocesses of pid=584968
[2025-11-26 21:55:12] 2025-11-27 02:54:36,480 | INFO     | process IDs to be killed: [584968] (in reverse order)
[2025-11-26 21:55:12] 2025-11-27 02:54:36,678 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:55:12] 2025-11-27 02:54:36,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:55:12] 2025-11-27 02:54:36,739 | INFO     | did not find any defunct processes belonging to 584968
[2025-11-26 21:55:12] 2025-11-27 02:54:36,808 | INFO     | did not find any defunct processes belonging to 584968
[2025-11-26 21:55:12] 2025-11-27 02:54:36,825 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:55:12] 2025-11-27 02:54:36,826 | INFO     | ready for new job
[2025-11-26 21:55:12] 2025-11-27 02:54:36,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:55:12] 2025-11-27 02:54:36,838 | INFO     | ***************************************
[2025-11-26 21:55:12] 2025-11-27 02:54:36,838 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:55:12] 2025-11-27 02:54:36,838 | INFO     | ***************************************
[2025-11-26 21:55:12] 2025-11-27 02:54:36,838 | INFO     | 
[2025-11-26 21:55:12] 2025-11-27 02:54:36,840 | INFO     | architecture information:
[2025-11-26 21:55:12] 2025-11-27 02:54:36,844 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:55:12] 2025-11-27 02:54:36,870 | INFO     | cat /etc/os-release:
[2025-11-26 21:55:12] NAME="CentOS Linux"
[2025-11-26 21:55:12] VERSION="7 (Core)"
[2025-11-26 21:55:12] ID="centos"
[2025-11-26 21:55:12] ID_LIKE="rhel fedora"
[2025-11-26 21:55:12] VERSION_ID="7"
[2025-11-26 21:55:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:55:12] ANSI_COLOR="0;31"
[2025-11-26 21:55:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:55:12] HOME_URL="https://www.centos.org/"
[2025-11-26 21:55:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:55:12] 
[2025-11-26 21:55:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:55:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:55:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:55:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:55:12] 
[2025-11-26 21:55:12] 2025-11-27 02:54:36,871 | INFO     | ***************************************
[2025-11-26 21:55:12] 2025-11-27 02:54:37,376 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 21:55:12] 2025-11-27 02:54:37,414 | INFO     | sufficient remaining disk space (72827797504 B)
[2025-11-26 21:55:12] 2025-11-27 02:54:37,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:55:12] 2025-11-27 02:54:37,415 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:55:12] 2025-11-27 02:54:37,415 | INFO     | update_server=False
[2025-11-26 21:55:12] 2025-11-27 02:54:37,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:55:12] 2025-11-27 02:54:37,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:55:12] 2025-11-27 02:54:37,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:55:12] 2025-11-27 02:54:37,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:55:12] 2025-11-27 02:54:37,997 | INFO     | aborting loop
[2025-11-26 21:55:12] 2025-11-27 02:54:38,020 | INFO     | all data control threads have been joined
[2025-11-26 21:55:12] 2025-11-27 02:54:38,222 | INFO     | all payload control threads have been joined
[2025-11-26 21:55:12] 2025-11-27 02:54:38,421 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:38,632 | INFO     | [job] validate thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:38,638 | INFO     | all job control threads have been joined
[2025-11-26 21:55:12] 2025-11-27 02:54:38,785 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,027 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,028 | INFO     | [data] control thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,035 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:55:12] 2025-11-27 02:54:39,194 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,228 | INFO     | [payload] control thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,380 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,534 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,649 | INFO     | [job] control thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,715 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:39,839 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:40,198 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:54:41,459 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:55:12] 2025-11-27 02:55:05,917 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:55:12] 2025-11-27 02:55:06,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388807079744)>', '<ExcThread(monitor, started 140388169930496)>']
[2025-11-26 21:55:12] 2025-11-27 02:55:07,821 | INFO     | PID=573536 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 21:55:12] 2025-11-27 02:55:07,822 | INFO     | .. there are 42 such processes running
[2025-11-26 21:55:12] 2025-11-27 02:55:07,824 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:55:12] 2025-11-27 02:55:07,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:55:12] 2025-11-27 02:55:07,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:55:12] 2025-11-27 02:55:07,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:55:12] 2025-11-27 02:55:07,825 | INFO     | [monitor] control thread has ended
[2025-11-26 21:55:12] 2025-11-27 02:55:11,585 | INFO     | all workflow threads have been joined
[2025-11-26 21:55:12] 2025-11-27 02:55:11,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:55:12] 2025-11-27 02:55:11,585 | INFO     | traces error code: 0
[2025-11-26 21:55:12] 2025-11-27 02:55:11,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:55:12] 2025-11-27 02:55:11,805 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:55:12] 2025-11-27 02:55:11,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:55:12] 2025-11-27 02:55:11,817 [wrapper] pilotpid: 573536
[2025-11-26 21:55:12] 2025-11-27 02:55:11,828 [wrapper] Pilot exit status: 0
[2025-11-26 21:55:12] 2025-11-27 02:55:11,867 [wrapper] pandaids: 6896714607
[2025-11-26 21:55:12] 2025-11-27 02:55:12,006 [wrapper] cleanup supervisor_pilot 1649439 573537
[2025-11-26 21:55:12] 2025-11-27 02:55:12,019 [wrapper] Test setup, not cleaning
[2025-11-26 21:55:12] 2025-11-27 02:55:12,045 [wrapper] apfmon messages muted
[2025-11-26 21:55:12] 2025-11-27 02:55:12,087 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:55:12] 2025-11-27 02:55:12,195 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:55:12]  *** Error codes and diagnostics ***
[2025-11-26 21:55:12]     "exeErrorCode": 0,
[2025-11-26 21:55:12]     "exeErrorDiag": "",
[2025-11-26 21:55:12]     "pilotErrorCode": 0,
[2025-11-26 21:55:12]     "pilotErrorDiag": "",
[2025-11-26 21:55:12]  *** Listing of results directory ***
[2025-11-26 21:55:12] total 1341124
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:41 queuedata.json
[2025-11-26 21:55:12] -rwx------. 1 boincer umatlas     36292 Nov 25 01:43 runpilot2-wrapper.sh
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:55:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 21:55:12] -rw-r--r--. 2 boincer umatlas 409646500 Nov 26 00:04 EVNT.47483658._002123.pool.root.1
[2025-11-26 21:55:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 21:55:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 21:55:12] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:04 input.tar.gz
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:04 pandaJob.out
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 21:55:12] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas       533 Nov 26 21:32 boinc_task_state.xml
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas 933679106 Nov 26 21:53 HITS.47556161._001070.pool.root.1
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas      1070 Nov 26 21:53 memory_monitor_summary.json
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas      6657 Nov 26 21:54 init_data.xml
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:54 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas   2532089 Nov 26 21:54 log.47556161._001070.job.log.tgz.1
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas      8646 Nov 26 21:54 heartbeat.json
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas        95 Nov 26 21:55 pilot_heartbeat.json
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:55 wrapper_checkpoint.txt
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas      4823 Nov 26 21:55 pilotlog.txt
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:55 boinc_mmap_file
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas  10498990 Nov 26 21:55 log.47556161._001070.job.log.1
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas       353 Nov 26 21:55 output.list
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:55 runtime_log
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas  13045760 Nov 26 21:55 result.tar.gz
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas       661 Nov 26 21:55 skFNDmew1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEDMKDmqb7J6n.diag
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 21:55 runtime_log.err
[2025-11-26 21:55:12] -rw-r--r--. 1 boincer umatlas     21350 Nov 26 21:55 stderr.txt
[2025-11-26 21:55:12] HITS file was successfully produced:
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas 933679106 Nov 26 21:53 shared/HITS.pool.root.1
[2025-11-26 21:55:12]  *** Contents of shared directory: ***
[2025-11-26 21:55:12] total 1325192
[2025-11-26 21:55:12] -rw-r--r--. 2 boincer umatlas 409646500 Nov 26 00:04 ATLAS.root_0
[2025-11-26 21:55:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 21:55:12] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:04 input.tar.gz
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas 933679106 Nov 26 21:53 HITS.pool.root.1
[2025-11-26 21:55:12] -rw-------. 1 boincer umatlas  13045760 Nov 26 21:55 result.tar.gz
21:55:34 (566631): run_atlas exited; CPU time 312806.241651
21:55:34 (566631): called boinc_finish(0)

</stderr_txt>
]]>

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