Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:47 (1266874): wrapper (7.7.26015): starting
00:04:47 (1266874): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:47] Arguments: --nthreads 9
[2025-11-26 00:04:47] Threads: 9
[2025-11-26 00:04:47] Checking for CVMFS
[2025-11-26 00:04:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:48] 2.13.3.0 12500 29607 216856 153309 1 334 19059747 32503809 47984 16776704 0 189998985 99.509 231336240 37990 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:48] CVMFS is ok
[2025-11-26 00:04:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:48] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:48] Checking for apptainer binary...
[2025-11-26 00:04:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:48] Running /usr/bin/apptainer --version
[2025-11-26 00:04:48] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:48] c7-7-36.aglt2.org
[2025-11-26 00:04:48] apptainer works
[2025-11-26 00:04:48] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:48] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:48] Starting ATLAS job with PandaID=6896045944
[2025-11-26 00:04:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:31:19]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:31:19] 2025-11-26 16:30:33,827 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:31:19] 2025-11-26 16:30:33,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:31:19] 2025-11-26 16:30:33,837 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:31:19] 2025-11-26 16:30:33,838 | INFO     | sum of square deviations: 94942888782.93929
[2025-11-26 11:31:19] 2025-11-26 16:30:33,846 | INFO     | sum of deviations: 705079237600.4408
[2025-11-26 11:31:19] 2025-11-26 16:30:33,846 | INFO     | mean x: 1764154062.2181008
[2025-11-26 11:31:19] 2025-11-26 16:30:33,846 | INFO     | mean y: 2988319.078635015
[2025-11-26 11:31:19] 2025-11-26 16:30:33,846 | INFO     | intersect: -13098239346.768158
[2025-11-26 11:31:19] 2025-11-26 16:30:33,847 | INFO     | chi2: 8.0612424818726
[2025-11-26 11:31:19] 2025-11-26 16:30:33,847 | INFO     | sum of square deviations: 92845722657.84174
[2025-11-26 11:31:19] 2025-11-26 16:30:33,855 | INFO     | sum of deviations: 957299100842.2792
[2025-11-26 11:31:19] 2025-11-26 16:30:33,855 | INFO     | mean x: 1764153909.7234678
[2025-11-26 11:31:19] 2025-11-26 16:30:33,856 | INFO     | mean y: 3006660.931240658
[2025-11-26 11:31:19] 2025-11-26 16:30:33,856 | INFO     | intersect: -18186554507.647045
[2025-11-26 11:31:19] 2025-11-26 16:30:33,856 | INFO     | chi2: 4.3944812029845215
[2025-11-26 11:31:19] 2025-11-26 16:30:33,856 | INFO     | current chi2=4.3944812029845215 (change=45.48630421592655 %)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,857 | INFO     | sum of square deviations: 90779673395.20465
[2025-11-26 11:31:19] 2025-11-26 16:30:33,865 | INFO     | sum of deviations: 1123800638401.604
[2025-11-26 11:31:19] 2025-11-26 16:30:33,866 | INFO     | mean x: 1764153757.2289157
[2025-11-26 11:31:19] 2025-11-26 16:30:33,866 | INFO     | mean y: 3018930.7394578313
[2025-11-26 11:31:19] 2025-11-26 16:30:33,866 | INFO     | intersect: -21836199524.932697
[2025-11-26 11:31:19] 2025-11-26 16:30:33,866 | INFO     | chi2: 2.4773808829134834
[2025-11-26 11:31:19] 2025-11-26 16:30:33,866 | INFO     | current chi2=2.4773808829134834 (change=43.625179663279376 %)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,867 | INFO     | sum of square deviations: 88744468172.99522
[2025-11-26 11:31:19] 2025-11-26 16:30:33,876 | INFO     | sum of deviations: 1164158065957.4558
[2025-11-26 11:31:19] 2025-11-26 16:30:33,876 | INFO     | mean x: 1764153604.7329288
[2025-11-26 11:31:19] 2025-11-26 16:30:33,876 | INFO     | mean y: 3021944.707132018
[2025-11-26 11:31:19] 2025-11-26 16:30:33,877 | INFO     | intersect: -23139306707.64614
[2025-11-26 11:31:19] 2025-11-26 16:30:33,877 | INFO     | chi2: 2.2377515441350564
[2025-11-26 11:31:19] 2025-11-26 16:30:33,877 | INFO     | current chi2=2.2377515441350564 (change=9.672688621727588 %)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,877 | INFO     | right removable region: 658
[2025-11-26 11:31:19] 2025-11-26 16:30:33,878 | INFO     | sum of square deviations: 92845468410.28696
[2025-11-26 11:31:19] 2025-11-26 16:30:33,886 | INFO     | sum of deviations: 528854955828.1305
[2025-11-26 11:31:19] 2025-11-26 16:30:33,886 | INFO     | mean x: 1764154214.7219732
[2025-11-26 11:31:19] 2025-11-26 16:30:33,886 | INFO     | mean y: 3001102.446935725
[2025-11-26 11:31:19] 2025-11-26 16:30:33,887 | INFO     | intersect: -10045757499.081411
[2025-11-26 11:31:19] 2025-11-26 16:30:33,887 | INFO     | chi2: 5.998624697279658
[2025-11-26 11:31:19] 2025-11-26 16:30:33,887 | INFO     | current chi2=5.998624697279658 (change=25.58684705529169 %)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,888 | INFO     | sum of square deviations: 90779124212.66115
[2025-11-26 11:31:19] 2025-11-26 16:30:33,897 | INFO     | sum of deviations: 481465491081.9557
[2025-11-26 11:31:19] 2025-11-26 16:30:33,897 | INFO     | mean x: 1764154367.2274096
[2025-11-26 11:31:19] 2025-11-26 16:30:33,897 | INFO     | mean y: 3004597.9804216865
[2025-11-26 11:31:19] 2025-11-26 16:30:33,897 | INFO     | intersect: -9353545777.761768
[2025-11-26 11:31:19] 2025-11-26 16:30:33,898 | INFO     | chi2: 5.941177671159017
[2025-11-26 11:31:19] 2025-11-26 16:30:33,898 | INFO     | current chi2=5.941177671159017 (change=0.9576699496918577 %)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,898 | INFO     | left removable region: 20
[2025-11-26 11:31:19] 2025-11-26 16:30:33,898 | INFO     | sum of square deviations: 80527605566.86513
[2025-11-26 11:31:19] 2025-11-26 16:30:33,906 | INFO     | sum of deviations: 865767705771.3865
[2025-11-26 11:31:19] 2025-11-26 16:30:33,906 | INFO     | mean x: 1764154184.2539184
[2025-11-26 11:31:19] 2025-11-26 16:30:33,906 | INFO     | mean y: 3044384.645768025
[2025-11-26 11:31:19] 2025-11-26 16:30:33,906 | INFO     | intersect: -18963715026.3278
[2025-11-26 11:31:19] 2025-11-26 16:30:33,907 | INFO     | chi2: 0.04795007190642946
[2025-11-26 11:31:19] 2025-11-26 16:30:33,907 | INFO     | current memory leak: 10.75 B/s (using 638 data points, chi2=0.05)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | could have reported an average CPU frequency of 3237 MHz (26 samples)
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | ..............................
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . Timing measurements:
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . get job = 0 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . initial setup = 2 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . payload setup = 7 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . stage-in = 0 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . payload execution = 41085 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,908 | INFO     | . stage-out = 3 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,909 | INFO     | . log creation = 0 s
[2025-11-26 11:31:19] 2025-11-26 16:30:33,909 | INFO     | ..............................
[2025-11-26 11:31:19] 2025-11-26 16:30:34,058 | INFO     | 
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | job summary report
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | --------------------------------------------------
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | PanDA job id: 6896045944
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | task id: 47556185
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | errors: (none)
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | pilot state: finished 
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | transexitcode: 0
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | exeerrorcode: 0
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | exeerrordiag: 
[2025-11-26 11:31:19] 2025-11-26 16:30:34,059 | INFO     | exitcode: 0
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | exitmsg: OK
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | cpuconsumptiontime: 191392 s
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | nevents: 1000
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | neventsw: 0
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | pid: 1281205
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | pgrp: 1281205
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | corecount: 9
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | event service: False
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | sizes: {0: 2284027, 1: 2284282, 7: 2284544, 11: 2284572, 41096: 2329866, 41101: 2338860, 41102: 2339044, 41114: 2339290}
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | --------------------------------------------------
[2025-11-26 11:31:19] 2025-11-26 16:30:34,060 | INFO     | 
[2025-11-26 11:31:19] 2025-11-26 16:30:34,061 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:31:19] 2025-11-26 16:30:34,122 | INFO     | job 6896045944 has completed (purged errors)
[2025-11-26 11:31:19] 2025-11-26 16:30:34,122 | INFO     | overall cleanup function is called
[2025-11-26 11:31:19] 2025-11-26 16:30:35,152 | INFO     | --- collectZombieJob: --- 10, [1281205]
[2025-11-26 11:31:19] 2025-11-26 16:30:35,153 | INFO     | zombie collector waiting for pid 1281205
[2025-11-26 11:31:19] 2025-11-26 16:30:35,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:31:19] 2025-11-26 16:30:35,153 | INFO     | collected zombie processes
[2025-11-26 11:31:19] 2025-11-26 16:30:35,153 | INFO     | will attempt to kill all subprocesses of pid=1281205
[2025-11-26 11:31:19] 2025-11-26 16:30:36,528 | INFO     | process IDs to be killed: [1281205] (in reverse order)
[2025-11-26 11:31:19] 2025-11-26 16:30:36,805 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:31:19] 2025-11-26 16:30:36,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:31:19] 2025-11-26 16:30:36,836 | INFO     | did not find any defunct processes belonging to 1281205
[2025-11-26 11:31:19] 2025-11-26 16:30:36,866 | INFO     | did not find any defunct processes belonging to 1281205
[2025-11-26 11:31:19] 2025-11-26 16:30:36,867 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:31:19] 2025-11-26 16:30:36,867 | INFO     | ready for new job
[2025-11-26 11:31:19] 2025-11-26 16:30:36,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:31:19] 2025-11-26 16:30:36,870 | INFO     | ***************************************
[2025-11-26 11:31:19] 2025-11-26 16:30:36,870 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:31:19] 2025-11-26 16:30:36,870 | INFO     | ***************************************
[2025-11-26 11:31:19] 2025-11-26 16:30:36,871 | INFO     | 
[2025-11-26 11:31:19] 2025-11-26 16:30:36,875 | INFO     | architecture information:
[2025-11-26 11:31:19] 2025-11-26 16:30:36,876 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:31:19] 2025-11-26 16:30:36,895 | INFO     | cat /etc/os-release:
[2025-11-26 11:31:19] NAME="CentOS Linux"
[2025-11-26 11:31:19] VERSION="7 (Core)"
[2025-11-26 11:31:19] ID="centos"
[2025-11-26 11:31:19] ID_LIKE="rhel fedora"
[2025-11-26 11:31:19] VERSION_ID="7"
[2025-11-26 11:31:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:31:19] ANSI_COLOR="0;31"
[2025-11-26 11:31:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:31:19] HOME_URL="https://www.centos.org/"
[2025-11-26 11:31:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:31:19] 
[2025-11-26 11:31:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:31:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:31:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:31:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:31:19] 
[2025-11-26 11:31:19] 2025-11-26 16:30:36,895 | INFO     | ***************************************
[2025-11-26 11:31:19] 2025-11-26 16:30:37,400 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 11:31:19] 2025-11-26 16:30:37,452 | INFO     | sufficient remaining disk space (86920658944 B)
[2025-11-26 11:31:19] 2025-11-26 16:30:37,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:31:19] 2025-11-26 16:30:37,456 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:31:19] 2025-11-26 16:30:37,456 | INFO     | update_server=False
[2025-11-26 11:31:19] 2025-11-26 16:30:37,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:31:19] 2025-11-26 16:30:37,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:31:19] 2025-11-26 16:30:37,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:31:19] 2025-11-26 16:30:37,458 | INFO     | aborting loop
[2025-11-26 11:31:19] 2025-11-26 16:30:37,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:31:19] 2025-11-26 16:30:37,586 | INFO     | all payload control threads have been joined
[2025-11-26 11:31:19] 2025-11-26 16:30:37,976 | INFO     | all data control threads have been joined
[2025-11-26 11:31:19] 2025-11-26 16:30:38,326 | INFO     | all job control threads have been joined
[2025-11-26 11:31:19] 2025-11-26 16:30:38,481 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:38,482 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:38,593 | INFO     | [payload] control thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:38,971 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:38,986 | INFO     | [data] control thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:31:19] 2025-11-26 16:30:39,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,316 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,332 | INFO     | [job] control thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,464 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,487 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,670 | INFO     | [job] validate thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,891 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,903 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:39,951 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:40,077 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:30:41,464 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:31:19] 2025-11-26 16:31:07,149 | INFO     | PID=1270592 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:31:19] 2025-11-26 16:31:07,149 | INFO     | .. there are 73 such processes running
[2025-11-26 11:31:19] 2025-11-26 16:31:07,149 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:31:19] 2025-11-26 16:31:07,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:31:19] 2025-11-26 16:31:07,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:31:19] 2025-11-26 16:31:12,178 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:31:19] 2025-11-26 16:31:13,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718328084288)>', '<ExcThread(monitor, started 139717702055680)>']
[2025-11-26 11:31:19] 2025-11-26 16:31:14,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:31:19] 2025-11-26 16:31:14,197 | INFO     | [monitor] control thread has ended
[2025-11-26 11:31:19] 2025-11-26 16:31:18,538 | INFO     | all workflow threads have been joined
[2025-11-26 11:31:19] 2025-11-26 16:31:18,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:31:19] 2025-11-26 16:31:18,539 | INFO     | traces error code: 0
[2025-11-26 11:31:19] 2025-11-26 16:31:18,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:31:19] 2025-11-26 16:31:18,747 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:31:19] 2025-11-26 16:31:18,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:31:19] 2025-11-26 16:31:18,753 [wrapper] pilotpid: 1270592
[2025-11-26 11:31:19] 2025-11-26 16:31:18,756 [wrapper] Pilot exit status: 0
[2025-11-26 11:31:19] 2025-11-26 16:31:18,807 [wrapper] pandaids: 6896045944
[2025-11-26 11:31:19] 2025-11-26 16:31:19,053 [wrapper] cleanup supervisor_pilot 1379418 1270593
[2025-11-26 11:31:19] 2025-11-26 16:31:19,072 [wrapper] Test setup, not cleaning
[2025-11-26 11:31:19] 2025-11-26 16:31:19,112 [wrapper] apfmon messages muted
[2025-11-26 11:31:19] 2025-11-26 16:31:19,124 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:31:19] 2025-11-26 16:31:19,130 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:31:19]  *** Error codes and diagnostics ***
[2025-11-26 11:31:19]     "exeErrorCode": 0,
[2025-11-26 11:31:19]     "exeErrorDiag": "",
[2025-11-26 11:31:19]     "pilotErrorCode": 0,
[2025-11-26 11:31:19]     "pilotErrorDiag": "",
[2025-11-26 11:31:19]  *** Listing of results directory ***
[2025-11-26 11:31:19] total 1310512
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:05 queuedata.json
[2025-11-26 11:31:19] -rwx------. 1 boincer umatlas     36292 Nov 24 14:06 runpilot2-wrapper.sh
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:31:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 11:31:19] -rw-r--r--. 2 boincer umatlas 410263963 Nov 26 00:04 EVNT.47483658._004241.pool.root.1
[2025-11-26 11:31:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 11:31:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 11:31:19] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 00:04 input.tar.gz
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas      2780 Nov 26 00:04 pandaJob.out
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-26 11:31:19] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas       533 Nov 26 11:15 boinc_task_state.xml
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 11:28 init_data.xml
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas 912762292 Nov 26 11:29 HITS.47556185._000041.pool.root.1
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas        95 Nov 26 11:30 pilot_heartbeat.json
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas      1071 Nov 26 11:30 memory_monitor_summary.json
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas   1516240 Nov 26 11:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas   2023115 Nov 26 11:30 log.47556185._000041.job.log.tgz.1
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas      8624 Nov 26 11:30 heartbeat.json
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas        29 Nov 26 11:31 wrapper_checkpoint.txt
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas      4824 Nov 26 11:31 pilotlog.txt
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 11:31 boinc_mmap_file
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas   5482163 Nov 26 11:31 log.47556185._000041.job.log.1
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas       353 Nov 26 11:31 output.list
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas       620 Nov 26 11:31 runtime_log
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas   7526400 Nov 26 11:31 result.tar.gz
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 11:31 runtime_log.err
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas       664 Nov 26 11:31 hUiLDmG4qh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2rLKDm7sH6Dn.diag
[2025-11-26 11:31:19] -rw-r--r--. 1 boincer umatlas     21128 Nov 26 11:31 stderr.txt
[2025-11-26 11:31:19] HITS file was successfully produced:
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas 912762292 Nov 26 11:29 shared/HITS.pool.root.1
[2025-11-26 11:31:19]  *** Contents of shared directory: ***
[2025-11-26 11:31:19] total 1299980
[2025-11-26 11:31:19] -rw-r--r--. 2 boincer umatlas 410263963 Nov 26 00:04 ATLAS.root_0
[2025-11-26 11:31:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 11:31:19] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 00:04 input.tar.gz
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas 912762292 Nov 26 11:29 HITS.pool.root.1
[2025-11-26 11:31:19] -rw-------. 1 boincer umatlas   7526400 Nov 26 11:31 result.tar.gz
11:31:40 (1266874): run_atlas exited; CPU time 192535.778221
11:31:40 (1266874): called boinc_finish(0)

</stderr_txt>
]]>

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