Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:56:11 (3669810): wrapper (7.7.26015): starting
10:56:11 (3669810): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 10:56:11] Arguments: --nthreads 9
[2025-11-26 10:56:11] Threads: 9
[2025-11-26 10:56:11] Checking for CVMFS
[2025-11-26 10:56:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:56:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:56:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:56:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:56:13] 2.13.3.0 11883 30123 386832 153326 3 818 32507046 32935936 40364 16776704 0 153630366 99.601 168338341 34054 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:56:13] CVMFS is ok
[2025-11-26 10:56:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:56:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:56:13] Further information can be found at the LHC@home message board.
[2025-11-26 10:56:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:56:13] Checking for apptainer binary...
[2025-11-26 10:56:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:56:13] Running /usr/bin/apptainer --version
[2025-11-26 10:56:13] apptainer version 1.4.4-1.el9
[2025-11-26 10:56:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:56:14] c6-12-29-2.aglt2.org
[2025-11-26 10:56:14] apptainer works
[2025-11-26 10:56:14] Set ATHENA_PROC_NUMBER=9
[2025-11-26 10:56:14] Set ATHENA_CORE_NUMBER=9
[2025-11-26 10:56:14] Starting ATLAS job with PandaID=6896714624
[2025-11-26 10:56:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:12:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:12:35] 2025-11-27 17:11:41,418 | INFO     | 90870s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 12:12:35] 2025-11-27 17:11:42,881 | INFO     | monitor loop #4908: job 0:6896714624 is in state 'finished'
[2025-11-27 12:12:35] 2025-11-27 17:11:42,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:12:35] 2025-11-27 17:11:43,432 | INFO     | time since job start (90866s) is within the limit (172800.0s)
[2025-11-27 12:12:35] 2025-11-27 17:11:45,399 | INFO     | monitor loop #4909: job 0:6896714624 is in state 'finished'
[2025-11-27 12:12:35] 2025-11-27 17:11:45,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:12:35] 2025-11-27 17:11:45,441 | INFO     | time since job start (90868s) is within the limit (172800.0s)
[2025-11-27 12:12:35] 2025-11-27 17:11:47,455 | INFO     | time since job start (90870s) is within the limit (172800.0s)
[2025-11-27 12:12:35] 2025-11-27 17:11:47,904 | INFO     | monitor loop #4910: job 0:6896714624 is in state 'finished'
[2025-11-27 12:12:35] 2025-11-27 17:11:47,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:12:35] 2025-11-27 17:11:49,467 | INFO     | time since job start (90872s) is within the limit (172800.0s)
[2025-11-27 12:12:35] 2025-11-27 17:11:50,412 | INFO     | monitor loop #4911: job 0:6896714624 is in state 'finished'
[2025-11-27 12:12:35] 2025-11-27 17:11:50,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,139 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 12:12:35] 2025-11-27 17:11:51,203 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2612.3891562500003
[2025-11-27 12:12:35] 2025-11-27 17:11:51,293 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896714624/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,294 | INFO     | extracted standard info from prmon json
[2025-11-27 12:12:35] 2025-11-27 17:11:51,294 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:12:35] 2025-11-27 17:11:51,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:12:35] 2025-11-27 17:11:51,363 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:12:35] 2025-11-27 17:11:51,365 | INFO     | sum of square deviations: 1019640942684.405
[2025-11-27 12:12:35] 2025-11-27 17:11:51,476 | INFO     | sum of deviations: 4667878925428.972
[2025-11-27 12:12:35] 2025-11-27 17:11:51,476 | INFO     | mean x: 1764218105.452589
[2025-11-27 12:12:35] 2025-11-27 17:11:51,476 | INFO     | mean y: 3074633.708809684
[2025-11-27 12:12:35] 2025-11-27 17:11:51,476 | INFO     | intersect: -8073451297.685924
[2025-11-27 12:12:35] 2025-11-27 17:11:51,483 | INFO     | chi2: 23.528505910480398
[2025-11-27 12:12:35] 2025-11-27 17:11:51,479 | INFO     | time since job start (90874s) is within the limit (172800.0s)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,485 | INFO     | sum of square deviations: 1009391900011.7289
[2025-11-27 12:12:35] 2025-11-27 17:11:51,574 | INFO     | sum of deviations: 5250307877446.711
[2025-11-27 12:12:35] 2025-11-27 17:11:51,575 | INFO     | mean x: 1764217952.9608636
[2025-11-27 12:12:35] 2025-11-27 17:11:51,575 | INFO     | mean y: 3083297.701754386
[2025-11-27 12:12:35] 2025-11-27 17:11:51,575 | INFO     | intersect: -9173419323.188808
[2025-11-27 12:12:35] 2025-11-27 17:11:51,581 | INFO     | chi2: 19.628842248966563
[2025-11-27 12:12:35] 2025-11-27 17:11:51,581 | INFO     | current chi2=19.628842248966563 (change=16.57420864865368 %)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,581 | INFO     | right removable region: 1481
[2025-11-27 12:12:35] 2025-11-27 17:11:51,583 | INFO     | sum of square deviations: 1009389765808.6504
[2025-11-27 12:12:35] 2025-11-27 17:11:51,671 | INFO     | sum of deviations: 4064836036957.292
[2025-11-27 12:12:35] 2025-11-27 17:11:51,671 | INFO     | mean x: 1764218257.9601889
[2025-11-27 12:12:35] 2025-11-27 17:11:51,672 | INFO     | mean y: 3083603.377867746
[2025-11-27 12:12:35] 2025-11-27 17:11:51,672 | INFO     | intersect: -7101464307.576526
[2025-11-27 12:12:35] 2025-11-27 17:11:51,678 | INFO     | chi2: 19.87988283797111
[2025-11-27 12:12:35] 2025-11-27 17:11:51,678 | INFO     | current chi2=19.87988283797111 (change=15.507245068561993 %)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,678 | INFO     | left removable region: 10
[2025-11-27 12:12:35] 2025-11-27 17:11:51,680 | INFO     | sum of square deviations: 987081958717.0743
[2025-11-27 12:12:35] 2025-11-27 17:11:51,763 | INFO     | sum of deviations: 4199280412200.9214
[2025-11-27 12:12:35] 2025-11-27 17:11:51,768 | INFO     | mean x: 1764218227.478586
[2025-11-27 12:12:35] 2025-11-27 17:11:51,768 | INFO     | mean y: 3102065.8069340587
[2025-11-27 12:12:35] 2025-11-27 17:11:51,768 | INFO     | intersect: -7502300074.383661
[2025-11-27 12:12:35] 2025-11-27 17:11:51,770 | INFO     | chi2: 12.440620650625052
[2025-11-27 12:12:35] 2025-11-27 17:11:51,770 | INFO     | current memory leak: 4.25 B/s (using 1471 data points, chi2=12.44)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,776 | INFO     | could have reported an average CPU frequency of 2641 MHz (53 samples)
[2025-11-27 12:12:35] 2025-11-27 17:11:51,776 | INFO     | ..............................
[2025-11-27 12:12:35] 2025-11-27 17:11:51,776 | INFO     | . Timing measurements:
[2025-11-27 12:12:35] 2025-11-27 17:11:51,776 | INFO     | . get job = 0 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,776 | INFO     | . initial setup = 5 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,776 | INFO     | . payload setup = 45 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,777 | INFO     | . stage-in = 0 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,777 | INFO     | . payload execution = 90704 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,777 | INFO     | . stage-out = 14 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,777 | INFO     | . log creation = 5 s
[2025-11-27 12:12:35] 2025-11-27 17:11:51,777 | INFO     | ..............................
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | 
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | job summary report
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | --------------------------------------------------
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | PanDA job id: 6896714624
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | task id: 47556161
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | errors: (none)
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:12:35] 2025-11-27 17:11:52,545 | INFO     | pilot state: finished 
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | transexitcode: 0
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | exeerrorcode: 0
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | exeerrordiag: 
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | exitcode: 0
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | exitmsg: OK
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | cpuconsumptiontime: 271063 s
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | nevents: 1000
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | neventsw: 0
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | pid: 3706832
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | pgrp: 3706832
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | corecount: 9
[2025-11-27 12:12:35] 2025-11-27 17:11:52,546 | INFO     | event service: False
[2025-11-27 12:12:35] 2025-11-27 17:11:52,547 | INFO     | sizes: {0: 2284037, 1: 2284093, 2: 2284149, 3: 2284348, 14: 2284348, 25: 2284376, 32: 2284794, 36: 2284822, 90756: 2350042, 90771: 2359092, 90809: 2359378}
[2025-11-27 12:12:35] 2025-11-27 17:11:52,547 | INFO     | --------------------------------------------------
[2025-11-27 12:12:35] 2025-11-27 17:11:52,547 | INFO     | 
[2025-11-27 12:12:35] 2025-11-27 17:11:52,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 12:12:35] 2025-11-27 17:11:52,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | job 6896714624 has completed (purged errors)
[2025-11-27 12:12:35] 2025-11-27 17:11:52,665 | INFO     | overall cleanup function is called
[2025-11-27 12:12:35] 2025-11-27 17:11:53,700 | INFO     | --- collectZombieJob: --- 10, [3706832]
[2025-11-27 12:12:35] 2025-11-27 17:11:53,700 | INFO     | zombie collector waiting for pid 3706832
[2025-11-27 12:12:35] 2025-11-27 17:11:53,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:12:35] 2025-11-27 17:11:53,700 | INFO     | collected zombie processes
[2025-11-27 12:12:35] 2025-11-27 17:11:53,700 | INFO     | will attempt to kill all subprocesses of pid=3706832
[2025-11-27 12:12:35] 2025-11-27 17:11:56,182 | INFO     | PID=3680085 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:12:35] 2025-11-27 17:11:56,201 | INFO     | .. there are 61 such processes running
[2025-11-27 12:12:35] 2025-11-27 17:11:56,449 | INFO     | process IDs to be killed: [3706832] (in reverse order)
[2025-11-27 12:12:35] 2025-11-27 17:11:56,696 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:12:35] 2025-11-27 17:11:56,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:12:35] 2025-11-27 17:11:56,752 | INFO     | did not find any defunct processes belonging to 3706832
[2025-11-27 12:12:35] 2025-11-27 17:11:56,808 | INFO     | did not find any defunct processes belonging to 3706832
[2025-11-27 12:12:35] 2025-11-27 17:11:56,814 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:12:35] 2025-11-27 17:11:56,814 | INFO     | ready for new job
[2025-11-27 12:12:35] 2025-11-27 17:11:56,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:12:35] 2025-11-27 17:11:56,829 | INFO     | ***************************************
[2025-11-27 12:12:35] 2025-11-27 17:11:56,829 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:12:35] 2025-11-27 17:11:56,829 | INFO     | ***************************************
[2025-11-27 12:12:35] 2025-11-27 17:11:56,829 | INFO     | 
[2025-11-27 12:12:35] 2025-11-27 17:11:56,840 | INFO     | architecture information:
[2025-11-27 12:12:35] 2025-11-27 17:11:56,844 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:12:35] 2025-11-27 17:11:56,888 | INFO     | cat /etc/os-release:
[2025-11-27 12:12:35] NAME="CentOS Linux"
[2025-11-27 12:12:35] VERSION="7 (Core)"
[2025-11-27 12:12:35] ID="centos"
[2025-11-27 12:12:35] ID_LIKE="rhel fedora"
[2025-11-27 12:12:35] VERSION_ID="7"
[2025-11-27 12:12:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:12:35] ANSI_COLOR="0;31"
[2025-11-27 12:12:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:12:35] HOME_URL="https://www.centos.org/"
[2025-11-27 12:12:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:12:35] 
[2025-11-27 12:12:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:12:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:12:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:12:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:12:35] 
[2025-11-27 12:12:35] 2025-11-27 17:11:56,888 | INFO     | ***************************************
[2025-11-27 12:12:35] 2025-11-27 17:11:57,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 12:12:35] 2025-11-27 17:11:57,570 | INFO     | sufficient remaining disk space (85864742912 B)
[2025-11-27 12:12:35] 2025-11-27 17:11:57,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:12:35] 2025-11-27 17:11:57,571 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:12:35] 2025-11-27 17:11:57,571 | INFO     | update_server=False
[2025-11-27 12:12:35] 2025-11-27 17:11:57,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:12:35] 2025-11-27 17:11:57,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:12:35] 2025-11-27 17:11:57,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:12:35] 2025-11-27 17:11:57,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:12:35] 2025-11-27 17:11:57,579 | INFO     | aborting loop
[2025-11-27 12:12:35] 2025-11-27 17:11:57,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:12:35] 2025-11-27 17:11:58,115 | INFO     | all payload control threads have been joined
[2025-11-27 12:12:35] 2025-11-27 17:11:58,577 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:58,584 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:58,584 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:58,600 | INFO     | all data control threads have been joined
[2025-11-27 12:12:35] 2025-11-27 17:11:58,800 | INFO     | all job control threads have been joined
[2025-11-27 12:12:35] 2025-11-27 17:11:59,090 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,090 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,121 | INFO     | [payload] control thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,454 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,460 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,468 | INFO     | [job] validate thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,473 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,606 | INFO     | [data] control thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,762 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:11:59,805 | INFO     | [job] control thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:12:00,074 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:12:00,100 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:12:01,582 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:12:35] 2025-11-27 17:12:04,224 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:12:35] 2025-11-27 17:12:05,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623302420288)>', '<ExcThread(monitor, started 139622524901120)>']
[2025-11-27 12:12:35] 2025-11-27 17:12:10,852 | INFO     | all workflow threads have been joined
[2025-11-27 12:12:35] 2025-11-27 17:12:10,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:12:35] 2025-11-27 17:12:10,852 | INFO     | traces error code: 0
[2025-11-27 12:12:35] 2025-11-27 17:12:10,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:12:35] 2025-11-27 17:12:19,000 [wrapper] supervise_pilot (15 min periods counter: 102)
[2025-11-27 12:12:35] 2025-11-27 17:12:30,809 | INFO     | PID=3680085 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:12:35] 2025-11-27 17:12:30,810 | INFO     | .. there are 61 such processes running
[2025-11-27 12:12:35] 2025-11-27 17:12:30,810 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:12:35] 2025-11-27 17:12:30,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:12:35] 2025-11-27 17:12:30,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:12:35] 2025-11-27 17:12:30,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:12:35] 2025-11-27 17:12:30,811 | INFO     | [monitor] control thread has ended
[2025-11-27 12:12:35] 2025-11-27 17:12:32,765 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:12:35] 2025-11-27 17:12:32,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:12:35] 2025-11-27 17:12:32,857 [wrapper] pilotpid: 3680085
[2025-11-27 12:12:35] 2025-11-27 17:12:32,874 [wrapper] Pilot exit status: 0
[2025-11-27 12:12:35] 2025-11-27 17:12:32,983 [wrapper] pandaids: 6896714624
[2025-11-27 12:12:35] 2025-11-27 17:12:34,416 [wrapper] cleanup supervisor_pilot 2829209 3680086
[2025-11-27 12:12:35] 2025-11-27 17:12:34,471 [wrapper] Test setup, not cleaning
[2025-11-27 12:12:35] 2025-11-27 17:12:34,486 [wrapper] apfmon messages muted
[2025-11-27 12:12:35] 2025-11-27 17:12:34,519 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:12:35] 2025-11-27 17:12:34,533 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:12:35]  *** Error codes and diagnostics ***
[2025-11-27 12:12:35]     "exeErrorCode": 0,
[2025-11-27 12:12:35]     "exeErrorDiag": "",
[2025-11-27 12:12:35]     "pilotErrorCode": 0,
[2025-11-27 12:12:35]     "pilotErrorDiag": "",
[2025-11-27 12:12:35]  *** Listing of results directory ***
[2025-11-27 12:12:35] total 1316712
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:41 queuedata.json
[2025-11-27 12:12:35] -rwx------. 1 boincer umatlas     36292 Nov 25 01:43 runpilot2-wrapper.sh
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas       100 Nov 26 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:12:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 10:56 run_atlas
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas       105 Nov 26 10:56 job.xml
[2025-11-27 12:12:35] -rw-r--r--. 2 boincer umatlas 411664993 Nov 26 10:56 EVNT.47483658._002125.pool.root.1
[2025-11-27 12:12:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:56 start_atlas.sh
[2025-11-27 12:12:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 10:56 shared
[2025-11-27 12:12:35] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 10:56 input.tar.gz
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas         0 Nov 26 10:56 boinc_lockfile
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 10:56 pandaJob.out
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas        57 Nov 26 10:56 setup.sh.local
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas    991855 Nov 26 10:57 agis_schedconf.cvmfs.json
[2025-11-27 12:12:35] drwx------. 5 boincer umatlas      4096 Nov 26 10:57 pilot3
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas       533 Nov 27 11:32 boinc_task_state.xml
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas 906162217 Nov 27 12:07 HITS.47556161._001087.pool.root.1
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas      6882 Nov 27 12:10 init_data.xml
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas      1059 Nov 27 12:10 memory_monitor_summary.json
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas   2575133 Nov 27 12:11 log.47556161._001087.job.log.tgz.1
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas      8629 Nov 27 12:11 heartbeat.json
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas        95 Nov 27 12:12 pilot_heartbeat.json
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas       823 Nov 27 12:12 pilotlog.txt
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:12 wrapper_checkpoint.txt
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas  10704354 Nov 27 12:12 log.47556161._001087.job.log.1
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas       353 Nov 27 12:12 output.list
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:12 runtime_log
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas  13301760 Nov 27 12:12 result.tar.gz
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 12:12 runtime_log.err
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas       662 Nov 27 12:12 0AQLDm6w1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVDMKDma02zWo.diag
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:12 boinc_mmap_file
[2025-11-27 12:12:35] -rw-r--r--. 1 boincer umatlas     21873 Nov 27 12:12 stderr.txt
[2025-11-27 12:12:35] HITS file was successfully produced:
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas 906162217 Nov 27 12:07 shared/HITS.pool.root.1
[2025-11-27 12:12:35]  *** Contents of shared directory: ***
[2025-11-27 12:12:35] total 1300544
[2025-11-27 12:12:35] -rw-r--r--. 2 boincer umatlas 411664993 Nov 26 10:56 ATLAS.root_0
[2025-11-27 12:12:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:56 start_atlas.sh
[2025-11-27 12:12:35] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 10:56 input.tar.gz
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas 906162217 Nov 27 12:07 HITS.pool.root.1
[2025-11-27 12:12:35] -rw-------. 1 boincer umatlas  13301760 Nov 27 12:12 result.tar.gz
12:12:37 (3669810): run_atlas exited; CPU time 275257.573719
12:12:37 (3669810): called boinc_finish(0)

</stderr_txt>
]]>

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