Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:31:55 (2577110): wrapper (7.7.26015): starting
22:31:55 (2577110): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 22:31:55] Arguments: --nthreads 8
[2025-11-26 22:31:55] Threads: 8
[2025-11-26 22:31:55] Checking for CVMFS
[2025-11-26 22:31:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:31:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:31:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:31:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:31:57] 2.13.2.0 6751 35249 245024 153345 1 343 21194089 40960001 26173 16776704 0 108738147 99.584 114965805 37352 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 22:31:57] CVMFS is ok
[2025-11-26 22:31:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:31:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:31:57] Further information can be found at the LHC@home message board.
[2025-11-26 22:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:31:57] Checking for apptainer binary...
[2025-11-26 22:31:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:31:57] Running /usr/bin/apptainer --version
[2025-11-26 22:31:57] apptainer version 1.4.4-1.el9
[2025-11-26 22:31:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:31:58] c-212-7.aglt2.org
[2025-11-26 22:31:58] apptainer works
[2025-11-26 22:31:58] Set ATHENA_PROC_NUMBER=8
[2025-11-26 22:31:58] Set ATHENA_CORE_NUMBER=8
[2025-11-26 22:31:58] Starting ATLAS job with PandaID=6895417694
[2025-11-26 22:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:44:22]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:44:22] 2025-11-28 00:43:19,086 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:44:22] 2025-11-28 00:43:19,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:44:22] 2025-11-28 00:43:19,102 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:44:22] 2025-11-28 00:43:19,103 | INFO     | sum of square deviations: 602723200926.307
[2025-11-27 19:44:22] 2025-11-28 00:43:19,130 | INFO     | sum of deviations: 3381718433349.996
[2025-11-27 19:44:22] 2025-11-28 00:43:19,131 | INFO     | mean x: 1764252539.9214745
[2025-11-27 19:44:22] 2025-11-28 00:43:19,131 | INFO     | mean y: 2961537.153044872
[2025-11-27 19:44:22] 2025-11-28 00:43:19,131 | INFO     | intersect: -9895786886.945644
[2025-11-27 19:44:22] 2025-11-28 00:43:19,132 | INFO     | chi2: 12.492802678286981
[2025-11-27 19:44:22] 2025-11-28 00:43:19,133 | INFO     | sum of square deviations: 595508007465.4133
[2025-11-27 19:44:22] 2025-11-28 00:43:19,165 | INFO     | sum of deviations: 3835415504899.809
[2025-11-27 19:44:22] 2025-11-28 00:43:19,166 | INFO     | mean x: 1764252387.4231699
[2025-11-27 19:44:22] 2025-11-28 00:43:19,166 | INFO     | mean y: 2971126.312148029
[2025-11-27 19:44:22] 2025-11-28 00:43:19,166 | INFO     | intersect: -11359833196.134066
[2025-11-27 19:44:22] 2025-11-28 00:43:19,167 | INFO     | chi2: 9.100421390828792
[2025-11-27 19:44:22] 2025-11-28 00:43:19,167 | INFO     | current chi2=9.100421390828792 (change=27.154685580316507 %)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,168 | INFO     | sum of square deviations: 588350629042.0137
[2025-11-27 19:44:22] 2025-11-28 00:43:19,202 | INFO     | sum of deviations: 4023083403798.0605
[2025-11-27 19:44:22] 2025-11-28 00:43:19,202 | INFO     | mean x: 1764252234.9248788
[2025-11-27 19:44:22] 2025-11-28 00:43:19,202 | INFO     | mean y: 2975122.4200323103
[2025-11-27 19:44:22] 2025-11-28 00:43:19,202 | INFO     | intersect: -12060807146.321407
[2025-11-27 19:44:22] 2025-11-28 00:43:19,204 | INFO     | chi2: 8.333583519282753
[2025-11-27 19:44:22] 2025-11-28 00:43:19,204 | INFO     | current chi2=8.333583519282753 (change=8.426399598581689 %)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,204 | INFO     | right removable region: 1237
[2025-11-27 19:44:22] 2025-11-28 00:43:19,205 | INFO     | sum of square deviations: 595507686605.4133
[2025-11-27 19:44:22] 2025-11-28 00:43:19,238 | INFO     | sum of deviations: 2860338379736.739
[2025-11-27 19:44:22] 2025-11-28 00:43:19,238 | INFO     | mean x: 1764252692.4231699
[2025-11-27 19:44:22] 2025-11-28 00:43:19,238 | INFO     | mean y: 2972555.5575221237
[2025-11-27 19:44:22] 2025-11-28 00:43:19,238 | INFO     | intersect: -8471073709.836218
[2025-11-27 19:44:22] 2025-11-28 00:43:19,239 | INFO     | chi2: 8.176412129325607
[2025-11-27 19:44:22] 2025-11-28 00:43:19,239 | INFO     | current chi2=8.176412129325607 (change=34.55101837527174 %)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,240 | INFO     | sum of square deviations: 588349987322.0132
[2025-11-27 19:44:22] 2025-11-28 00:43:19,273 | INFO     | sum of deviations: 2410354292296.4014
[2025-11-27 19:44:22] 2025-11-28 00:43:19,273 | INFO     | mean x: 1764252844.9248788
[2025-11-27 19:44:22] 2025-11-28 00:43:19,273 | INFO     | mean y: 2982141.509693053
[2025-11-27 19:44:22] 2025-11-28 00:43:19,273 | INFO     | intersect: -7224815103.488586
[2025-11-27 19:44:22] 2025-11-28 00:43:19,274 | INFO     | chi2: 5.057852573160915
[2025-11-27 19:44:22] 2025-11-28 00:43:19,275 | INFO     | current chi2=5.057852573160915 (change=38.14092913662746 %)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,276 | INFO     | sum of square deviations: 581250323734.6974
[2025-11-27 19:44:22] 2025-11-28 00:43:19,307 | INFO     | sum of deviations: 2276041137527.4717
[2025-11-27 19:44:22] 2025-11-28 00:43:19,307 | INFO     | mean x: 1764252997.4217355
[2025-11-27 19:44:22] 2025-11-28 00:43:19,307 | INFO     | mean y: 2985023.564476886
[2025-11-27 19:44:22] 2025-11-28 00:43:19,307 | INFO     | intersect: -6905419557.334882
[2025-11-27 19:44:22] 2025-11-28 00:43:19,309 | INFO     | chi2: 4.766405174553515
[2025-11-27 19:44:22] 2025-11-28 00:43:19,309 | INFO     | current chi2=4.766405174553515 (change=5.762275479398933 %)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,309 | INFO     | left removable region: 30
[2025-11-27 19:44:22] 2025-11-28 00:43:19,310 | INFO     | sum of square deviations: 545250178940.96454
[2025-11-27 19:44:22] 2025-11-28 00:43:19,341 | INFO     | sum of deviations: 2715434181449.902
[2025-11-27 19:44:22] 2025-11-28 00:43:19,341 | INFO     | mean x: 1764253119.4250207
[2025-11-27 19:44:22] 2025-11-28 00:43:19,341 | INFO     | mean y: 3003557.943661972
[2025-11-27 19:44:22] 2025-11-28 00:43:19,341 | INFO     | intersect: -8783262655.707628
[2025-11-27 19:44:22] 2025-11-28 00:43:19,342 | INFO     | chi2: 0.4617481493888936
[2025-11-27 19:44:22] 2025-11-28 00:43:19,342 | INFO     | current memory leak: 4.98 B/s (using 1207 data points, chi2=0.46)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | could have reported an average CPU frequency of 2976 MHz (45 samples)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | ..............................
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . Timing measurements:
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . get job = 0 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . initial setup = 9 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . payload setup = 31 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . stage-in = 0 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . payload execution = 76103 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . stage-out = 3 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | . log creation = 0 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,344 | INFO     | ..............................
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | 
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | job summary report
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | --------------------------------------------------
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | PanDA job id: 6895417694
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | task id: 47556149
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | errors: (none)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | pilot state: finished 
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | transexitcode: 0
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | exeerrorcode: 0
[2025-11-27 19:44:22] 2025-11-28 00:43:19,713 | INFO     | exeerrordiag: 
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | exitcode: 0
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | exitmsg: OK
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | cpuconsumptiontime: 215845 s
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | nevents: 1000
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | neventsw: 0
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | pid: 2599712
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | pgrp: 2599712
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | corecount: 8
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | event service: False
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 26: 2284638, 34: 2284794, 76138: 2345257, 76143: 2354251, 76144: 2354307, 76152: 2354553}
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | --------------------------------------------------
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | 
[2025-11-27 19:44:22] 2025-11-28 00:43:19,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | job 6895417694 has completed (purged errors)
[2025-11-27 19:44:22] 2025-11-28 00:43:19,741 | INFO     | overall cleanup function is called
[2025-11-27 19:44:22] 2025-11-28 00:43:20,759 | INFO     | --- collectZombieJob: --- 10, [2599712]
[2025-11-27 19:44:22] 2025-11-28 00:43:20,759 | INFO     | zombie collector waiting for pid 2599712
[2025-11-27 19:44:22] 2025-11-28 00:43:20,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:44:22] 2025-11-28 00:43:20,759 | INFO     | collected zombie processes
[2025-11-27 19:44:22] 2025-11-28 00:43:20,759 | INFO     | will attempt to kill all subprocesses of pid=2599712
[2025-11-27 19:44:22] 2025-11-28 00:43:21,148 | INFO     | process IDs to be killed: [2599712] (in reverse order)
[2025-11-27 19:44:22] 2025-11-28 00:43:21,282 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:44:22] 2025-11-28 00:43:21,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:44:22] 2025-11-28 00:43:21,300 | INFO     | did not find any defunct processes belonging to 2599712
[2025-11-27 19:44:22] 2025-11-28 00:43:21,317 | INFO     | did not find any defunct processes belonging to 2599712
[2025-11-27 19:44:22] 2025-11-28 00:43:21,318 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:44:22] 2025-11-28 00:43:21,318 | INFO     | ready for new job
[2025-11-27 19:44:22] 2025-11-28 00:43:21,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:44:22] 2025-11-28 00:43:21,323 | INFO     | ***************************************
[2025-11-27 19:44:22] 2025-11-28 00:43:21,323 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:44:22] 2025-11-28 00:43:21,323 | INFO     | ***************************************
[2025-11-27 19:44:22] 2025-11-28 00:43:21,323 | INFO     | 
[2025-11-27 19:44:22] 2025-11-28 00:43:21,328 | INFO     | architecture information:
[2025-11-27 19:44:22] 2025-11-28 00:43:21,328 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:44:22] 2025-11-28 00:43:21,375 | INFO     | cat /etc/os-release:
[2025-11-27 19:44:22] NAME="CentOS Linux"
[2025-11-27 19:44:22] VERSION="7 (Core)"
[2025-11-27 19:44:22] ID="centos"
[2025-11-27 19:44:22] ID_LIKE="rhel fedora"
[2025-11-27 19:44:22] VERSION_ID="7"
[2025-11-27 19:44:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:44:22] ANSI_COLOR="0;31"
[2025-11-27 19:44:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:44:22] HOME_URL="https://www.centos.org/"
[2025-11-27 19:44:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:44:22] 
[2025-11-27 19:44:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:44:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:44:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:44:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:44:22] 
[2025-11-27 19:44:22] 2025-11-28 00:43:21,376 | INFO     | ***************************************
[2025-11-27 19:44:22] 2025-11-28 00:43:21,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 19:44:22] 2025-11-28 00:43:21,907 | INFO     | sufficient remaining disk space (121573998592 B)
[2025-11-27 19:44:22] 2025-11-28 00:43:21,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:44:22] 2025-11-28 00:43:21,907 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:44:22] 2025-11-28 00:43:21,907 | INFO     | update_server=False
[2025-11-27 19:44:22] 2025-11-28 00:43:21,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:44:22] 2025-11-28 00:43:21,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:44:22] 2025-11-28 00:43:22,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:44:22] 2025-11-28 00:43:22,195 | INFO     | aborting loop
[2025-11-27 19:44:22] 2025-11-28 00:43:22,212 | INFO     | all data control threads have been joined
[2025-11-27 19:44:22] 2025-11-28 00:43:22,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:44:22] 2025-11-28 00:43:22,914 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:22,936 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:22,962 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:22,978 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:23,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:23,013 | INFO     | all payload control threads have been joined
[2025-11-27 19:44:22] 2025-11-28 00:43:23,020 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:23,200 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:23,217 | INFO     | [data] control thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:23,342 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:23,547 | INFO     | all job control threads have been joined
[2025-11-27 19:44:22] 2025-11-28 00:43:23,778 | INFO     | [job] validate thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:24,019 | INFO     | [payload] control thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:24,203 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:24,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:44:22] 2025-11-28 00:43:24,553 | INFO     | [job] control thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:24,863 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:25,439 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:25,918 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:44:22] 2025-11-28 00:43:52,212 | INFO     | PID=2581785 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:44:22] 2025-11-28 00:43:52,212 | INFO     | .. there are 25 such processes running
[2025-11-27 19:44:22] 2025-11-28 00:43:52,212 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:44:22] 2025-11-28 00:43:52,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:44:22] 2025-11-28 00:43:52,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:44:22] 2025-11-28 00:44:14,996 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:44:22] 2025-11-28 00:44:16,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192595371840)>', '<ExcThread(monitor, started 140192253978368)>']
[2025-11-27 19:44:22] 2025-11-28 00:44:17,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:44:22] 2025-11-28 00:44:17,343 | INFO     | [monitor] control thread has ended
[2025-11-27 19:44:22] 2025-11-28 00:44:21,592 | INFO     | all workflow threads have been joined
[2025-11-27 19:44:22] 2025-11-28 00:44:21,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:44:22] 2025-11-28 00:44:21,592 | INFO     | traces error code: 0
[2025-11-27 19:44:22] 2025-11-28 00:44:21,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:44:22] 2025-11-28 00:44:21,732 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:44:22] 2025-11-28 00:44:21,741 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:44:22] 2025-11-28 00:44:21,744 [wrapper] pilotpid: 2581785
[2025-11-27 19:44:22] 2025-11-28 00:44:21,749 [wrapper] Pilot exit status: 0
[2025-11-27 19:44:22] 2025-11-28 00:44:21,821 [wrapper] pandaids: 6895417694
[2025-11-27 19:44:22] 2025-11-28 00:44:21,947 [wrapper] cleanup supervisor_pilot 2103240 2581786
[2025-11-27 19:44:22] 2025-11-28 00:44:21,962 [wrapper] Test setup, not cleaning
[2025-11-27 19:44:22] 2025-11-28 00:44:21,977 [wrapper] apfmon messages muted
[2025-11-27 19:44:22] 2025-11-28 00:44:21,985 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:44:22] 2025-11-28 00:44:21,988 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:44:22]  *** Error codes and diagnostics ***
[2025-11-27 19:44:22]     "exeErrorCode": 0,
[2025-11-27 19:44:22]     "exeErrorDiag": "",
[2025-11-27 19:44:22]     "pilotErrorCode": 0,
[2025-11-27 19:44:22]     "pilotErrorDiag": "",
[2025-11-27 19:44:22]  *** Listing of results directory ***
[2025-11-27 19:44:22] total 1338176
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 02:53 pilot3.tar.gz
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 03:16 queuedata.json
[2025-11-27 19:44:22] -rwx------. 1 boincer umatlas     36292 Nov 24 03:17 runpilot2-wrapper.sh
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas       100 Nov 26 22:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:44:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 22:31 run_atlas
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas       105 Nov 26 22:31 job.xml
[2025-11-27 19:44:22] -rw-r--r--. 2 boincer umatlas 411142601 Nov 26 22:31 EVNT.47483658._001271.pool.root.1
[2025-11-27 19:44:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 22:31 shared
[2025-11-27 19:44:22] -rw-r--r--. 2 boincer umatlas    590111 Nov 26 22:31 input.tar.gz
[2025-11-27 19:44:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:31 start_atlas.sh
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas         0 Nov 26 22:31 boinc_lockfile
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 22:31 pandaJob.out
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas        57 Nov 26 22:31 setup.sh.local
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas    991546 Nov 26 22:32 agis_schedconf.cvmfs.json
[2025-11-27 19:44:22] drwx------. 5 boincer umatlas      4096 Nov 26 22:33 pilot3
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas       532 Nov 27 19:31 boinc_task_state.xml
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 19:40 init_data.xml
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas 930486078 Nov 27 19:42 HITS.47556149._002578.pool.root.1
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas        95 Nov 27 19:42 pilot_heartbeat.json
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas      1062 Nov 27 19:43 memory_monitor_summary.json
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:43 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas   2342767 Nov 27 19:43 log.47556149._002578.job.log.tgz.1
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas      8602 Nov 27 19:43 heartbeat.json
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:44 boinc_mmap_file
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:44 wrapper_checkpoint.txt
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas      4825 Nov 27 19:44 pilotlog.txt
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas  10028149 Nov 27 19:44 log.47556149._002578.job.log.1
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas       353 Nov 27 19:44 output.list
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:44 runtime_log
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas  12390400 Nov 27 19:44 result.tar.gz
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:44 runtime_log.err
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas       663 Nov 27 19:44 cxELDm5vgh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJyIKDmPCMSJo.diag
[2025-11-27 19:44:22] -rw-r--r--. 1 boincer umatlas     21165 Nov 27 19:44 stderr.txt
[2025-11-27 19:44:22] HITS file was successfully produced:
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas 930486078 Nov 27 19:42 shared/HITS.pool.root.1
[2025-11-27 19:44:22]  *** Contents of shared directory: ***
[2025-11-27 19:44:22] total 1322892
[2025-11-27 19:44:22] -rw-r--r--. 2 boincer umatlas 411142601 Nov 26 22:31 ATLAS.root_0
[2025-11-27 19:44:22] -rw-r--r--. 2 boincer umatlas    590111 Nov 26 22:31 input.tar.gz
[2025-11-27 19:44:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:31 start_atlas.sh
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas 930486078 Nov 27 19:42 HITS.pool.root.1
[2025-11-27 19:44:22] -rw-------. 1 boincer umatlas  12390400 Nov 27 19:44 result.tar.gz
19:44:23 (2577110): run_atlas exited; CPU time 216955.653231
19:44:23 (2577110): called boinc_finish(0)

</stderr_txt>
]]>

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