Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:54 (2457814): wrapper (7.7.26015): starting
00:00:54 (2457814): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:54] Arguments: --nthreads 9
[2025-11-26 00:00:54] Threads: 9
[2025-11-26 00:00:54] Checking for CVMFS
[2025-11-26 00:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:56] 2.13.2.0 6099 33955 295968 153309 1 312 22967362 40960000 9577 16776704 0 37666440 99.767 23029014 36122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:00:56] CVMFS is ok
[2025-11-26 00:00:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:56] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:56] Checking for apptainer binary...
[2025-11-26 00:00:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:56] Running /usr/bin/apptainer --version
[2025-11-26 00:00:56] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:56] c-210-31-2.aglt2.org
[2025-11-26 00:00:56] apptainer works
[2025-11-26 00:00:56] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:56] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:57] Starting ATLAS job with PandaID=6896713862
[2025-11-26 00:00:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:01:50]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:01:51] 2025-11-27 12:00:26,717 | INFO     | time since job start (111505s) is within the limit (172800.0s)
[2025-11-27 07:01:51] 2025-11-27 12:00:28,495 | INFO     | monitor loop #6788: job 0:6896713862 is in state 'finished'
[2025-11-27 07:01:51] 2025-11-27 12:00:28,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:01:51] 2025-11-27 12:00:28,724 | INFO     | time since job start (111507s) is within the limit (172800.0s)
[2025-11-27 07:01:51] 2025-11-27 12:00:30,731 | INFO     | time since job start (111509s) is within the limit (172800.0s)
[2025-11-27 07:01:51] 2025-11-27 12:00:30,927 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 07:01:51] 2025-11-27 12:00:30,932 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2549.3630714285714
[2025-11-27 07:01:51] 2025-11-27 12:00:30,944 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6896713862/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:01:51] 2025-11-27 12:00:30,945 | INFO     | extracted standard info from prmon json
[2025-11-27 07:01:51] 2025-11-27 12:00:30,945 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:01:51] 2025-11-27 12:00:30,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:01:51] 2025-11-27 12:00:30,979 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:01:51] 2025-11-27 12:00:30,982 | INFO     | sum of square deviations: 1887941330739.058
[2025-11-27 07:01:51] 2025-11-27 12:00:31,006 | INFO     | monitor loop #6789: job 0:6896713862 is in state 'finished'
[2025-11-27 07:01:51] 2025-11-27 12:00:31,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:01:51] 2025-11-27 12:00:31,168 | INFO     | sum of deviations: 11039798434872.037
[2025-11-27 07:01:51] 2025-11-27 12:00:31,169 | INFO     | mean x: 1764189127.0991237
[2025-11-27 07:01:51] 2025-11-27 12:00:31,169 | INFO     | mean y: 3041332.4583789706
[2025-11-27 07:01:51] 2025-11-27 12:00:31,169 | INFO     | intersect: -10313112060.159458
[2025-11-27 07:01:51] 2025-11-27 12:00:31,195 | INFO     | chi2: 15.484597876357252
[2025-11-27 07:01:51] 2025-11-27 12:00:31,198 | INFO     | sum of square deviations: 1872477101089.8289
[2025-11-27 07:01:51] 2025-11-27 12:00:31,535 | INFO     | sum of deviations: 11691587414169.145
[2025-11-27 07:01:51] 2025-11-27 12:00:31,568 | INFO     | mean x: 1764188974.6084569
[2025-11-27 07:01:51] 2025-11-27 12:00:31,568 | INFO     | mean y: 3047758.963756178
[2025-11-27 07:01:51] 2025-11-27 12:00:31,568 | INFO     | intersect: -11012397823.651514
[2025-11-27 07:01:51] 2025-11-27 12:00:31,571 | INFO     | chi2: 12.222056401337232
[2025-11-27 07:01:51] 2025-11-27 12:00:31,571 | INFO     | current chi2=12.222056401337232 (change=21.069591222652612 %)
[2025-11-27 07:01:51] 2025-11-27 12:00:31,571 | INFO     | right removable region: 1820
[2025-11-27 07:01:51] 2025-11-27 12:00:31,605 | INFO     | sum of square deviations: 1872473203671.6143
[2025-11-27 07:01:51] 2025-11-27 12:00:32,106 | INFO     | sum of deviations: 10267219869793.31
[2025-11-27 07:01:51] 2025-11-27 12:00:32,106 | INFO     | mean x: 1764189279.609006
[2025-11-27 07:01:51] 2025-11-27 12:00:32,106 | INFO     | mean y: 3048949.298187809
[2025-11-27 07:01:51] 2025-11-27 12:00:32,106 | INFO     | intersect: -9670424182.472494
[2025-11-27 07:01:51] 2025-11-27 12:00:32,108 | INFO     | chi2: 11.405203352948961
[2025-11-27 07:01:51] 2025-11-27 12:00:32,109 | INFO     | current chi2=11.405203352948961 (change=26.34485284010467 %)
[2025-11-27 07:01:51] 2025-11-27 12:00:32,142 | INFO     | sum of square deviations: 1857089775866.3098
[2025-11-27 07:01:51] 2025-11-27 12:00:32,340 | INFO     | sum of deviations: 9665951606352.768
[2025-11-27 07:01:51] 2025-11-27 12:00:32,340 | INFO     | mean x: 1764189432.1189427
[2025-11-27 07:01:51] 2025-11-27 12:00:32,340 | INFO     | mean y: 3054908.9686123347
[2025-11-27 07:01:51] 2025-11-27 12:00:32,340 | INFO     | intersect: -9179360446.985762
[2025-11-27 07:01:51] 2025-11-27 12:00:32,342 | INFO     | chi2: 9.089995792716252
[2025-11-27 07:01:51] 2025-11-27 12:00:32,343 | INFO     | current chi2=9.089995792716252 (change=20.299572822908786 %)
[2025-11-27 07:01:51] 2025-11-27 12:00:32,343 | INFO     | left removable region: 20
[2025-11-27 07:01:51] 2025-11-27 12:00:32,345 | INFO     | sum of square deviations: 1808440152147.3174
[2025-11-27 07:01:51] 2025-11-27 12:00:32,760 | INFO     | sum of deviations: 9946340026893.463
[2025-11-27 07:01:51] 2025-11-27 12:00:32,761 | INFO     | mean x: 1764189554.1194444
[2025-11-27 07:01:51] 2025-11-27 12:00:32,761 | INFO     | mean y: 3067631.756111111
[2025-11-27 07:01:51] 2025-11-27 12:00:32,761 | INFO     | intersect: -9699896083.31636
[2025-11-27 07:01:51] 2025-11-27 12:00:32,764 | INFO     | chi2: 4.53729889968965
[2025-11-27 07:01:51] 2025-11-27 12:00:32,769 | INFO     | current memory leak: 5.50 B/s (using 1800 data points, chi2=4.54)
[2025-11-27 07:01:51] 2025-11-27 12:00:32,770 | INFO     | could have reported an average CPU frequency of 2750 MHz (64 samples)
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | ..............................
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . Timing measurements:
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . get job = 0 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . initial setup = 6 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . payload setup = 46 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . stage-in = 0 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . payload execution = 111368 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . stage-out = 6 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | . log creation = 1 s
[2025-11-27 07:01:51] 2025-11-27 12:00:32,771 | INFO     | ..............................
[2025-11-27 07:01:51] 2025-11-27 12:00:32,816 | INFO     | time since job start (111511s) is within the limit (172800.0s)
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | 
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | job summary report
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | --------------------------------------------------
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | PanDA job id: 6896713862
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | task id: 47556161
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | errors: (none)
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | pilot state: finished 
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | transexitcode: 0
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | exeerrorcode: 0
[2025-11-27 07:01:51] 2025-11-27 12:00:33,123 | INFO     | exeerrordiag: 
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | exitcode: 0
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | exitmsg: OK
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | cpuconsumptiontime: 252955 s
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | nevents: 1000
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | neventsw: 0
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | pid: 2496621
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | pgrp: 2496621
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | corecount: 9
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | event service: False
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | sizes: {0: 2283385, 1: 2283986, 2: 2284269, 3: 2284269, 14: 2284297, 25: 2284325, 31: 2284743, 36: 2284771, 111419: 2361267, 111420: 2361266, 111426: 2370316, 1114
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | --------------------------------------------------
[2025-11-27 07:01:51] 2025-11-27 12:00:33,124 | INFO     | 
[2025-11-27 07:01:51] 2025-11-27 12:00:33,127 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 07:01:51] 2025-11-27 12:00:33,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,192 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,192 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:01:51] 2025-11-27 12:00:33,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:01:51] 2025-11-27 12:00:33,194 | INFO     | job 6896713862 has completed (purged errors)
[2025-11-27 07:01:51] 2025-11-27 12:00:33,194 | INFO     | overall cleanup function is called
[2025-11-27 07:01:51] 2025-11-27 12:00:34,210 | INFO     | --- collectZombieJob: --- 10, [2496621]
[2025-11-27 07:01:51] 2025-11-27 12:00:34,211 | INFO     | zombie collector waiting for pid 2496621
[2025-11-27 07:01:51] 2025-11-27 12:00:34,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:01:51] 2025-11-27 12:00:34,211 | INFO     | collected zombie processes
[2025-11-27 07:01:51] 2025-11-27 12:00:34,211 | INFO     | will attempt to kill all subprocesses of pid=2496621
[2025-11-27 07:01:51] 2025-11-27 12:00:34,983 | INFO     | process IDs to be killed: [2496621] (in reverse order)
[2025-11-27 07:01:51] 2025-11-27 12:00:35,337 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:01:51] 2025-11-27 12:00:35,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:01:51] 2025-11-27 12:00:35,361 | INFO     | did not find any defunct processes belonging to 2496621
[2025-11-27 07:01:51] 2025-11-27 12:00:35,378 | INFO     | did not find any defunct processes belonging to 2496621
[2025-11-27 07:01:51] 2025-11-27 12:00:35,384 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:01:51] 2025-11-27 12:00:35,384 | INFO     | ready for new job
[2025-11-27 07:01:51] 2025-11-27 12:00:35,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:01:51] 2025-11-27 12:00:35,399 | INFO     | ***************************************
[2025-11-27 07:01:51] 2025-11-27 12:00:35,400 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:01:51] 2025-11-27 12:00:35,400 | INFO     | ***************************************
[2025-11-27 07:01:51] 2025-11-27 12:00:35,400 | INFO     | 
[2025-11-27 07:01:51] 2025-11-27 12:00:35,408 | INFO     | architecture information:
[2025-11-27 07:01:51] 2025-11-27 12:00:35,408 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:01:51] 2025-11-27 12:00:35,472 | INFO     | cat /etc/os-release:
[2025-11-27 07:01:51] NAME="CentOS Linux"
[2025-11-27 07:01:51] VERSION="7 (Core)"
[2025-11-27 07:01:51] ID="centos"
[2025-11-27 07:01:51] ID_LIKE="rhel fedora"
[2025-11-27 07:01:51] VERSION_ID="7"
[2025-11-27 07:01:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:01:51] ANSI_COLOR="0;31"
[2025-11-27 07:01:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:01:51] HOME_URL="https://www.centos.org/"
[2025-11-27 07:01:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:01:51] 
[2025-11-27 07:01:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:01:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:01:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:01:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:01:51] 
[2025-11-27 07:01:51] 2025-11-27 12:00:35,472 | INFO     | ***************************************
[2025-11-27 07:01:51] 2025-11-27 12:00:35,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 07:01:51] 2025-11-27 12:00:36,030 | INFO     | sufficient remaining disk space (70431801344 B)
[2025-11-27 07:01:51] 2025-11-27 12:00:36,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:01:51] 2025-11-27 12:00:36,030 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:01:51] 2025-11-27 12:00:36,031 | INFO     | update_server=False
[2025-11-27 07:01:51] 2025-11-27 12:00:36,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:01:51] 2025-11-27 12:00:36,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:01:51] 2025-11-27 12:00:36,045 | INFO     | all data control threads have been joined
[2025-11-27 07:01:51] 2025-11-27 12:00:36,114 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 07:01:51] 2025-11-27 12:00:36,114 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 07:01:51] 2025-11-27 12:00:36,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:51] 2025-11-27 12:00:36,114 | INFO     | will abort loop
[2025-11-27 07:01:51] 2025-11-27 12:00:36,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:01:51] 2025-11-27 12:00:37,036 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:37,050 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:37,052 | INFO     | [data] control thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:37,120 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:37,305 | INFO     | all payload control threads have been joined
[2025-11-27 07:01:51] 2025-11-27 12:00:37,610 | INFO     | all job control threads have been joined
[2025-11-27 07:01:51] 2025-11-27 12:00:37,689 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:37,810 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,032 | INFO     | [job] validate thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,052 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:51] 2025-11-27 12:00:38,316 | INFO     | [payload] control thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,334 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,388 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,448 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:38,617 | INFO     | [job] control thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:39,145 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:00:40,040 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:01:51] 2025-11-27 12:01:06,219 | INFO     | PID=2469422 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:01:51] 2025-11-27 12:01:06,220 | INFO     | .. there are 9 such processes running
[2025-11-27 07:01:51] 2025-11-27 12:01:06,220 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:01:51] 2025-11-27 12:01:06,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:01:51] 2025-11-27 12:01:06,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:01:51] 2025-11-27 12:01:22,252 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:01:51] 2025-11-27 12:01:22,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100313110336)>', '<ExcThread(monitor, started 140099526313728)>']
[2025-11-27 07:01:51] 2025-11-27 12:01:23,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:01:51] 2025-11-27 12:01:23,326 | INFO     | [monitor] control thread has ended
[2025-11-27 07:01:51] 2025-11-27 12:01:27,890 | INFO     | all workflow threads have been joined
[2025-11-27 07:01:51] 2025-11-27 12:01:27,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:01:51] 2025-11-27 12:01:27,891 | INFO     | traces error code: 0
[2025-11-27 07:01:51] 2025-11-27 12:01:27,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:01:51] 2025-11-27 12:01:28,086 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:01:51] 2025-11-27 12:01:28,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:01:51] 2025-11-27 12:01:28,167 [wrapper] pilotpid: 2469422
[2025-11-27 07:01:51] 2025-11-27 12:01:28,186 [wrapper] Pilot exit status: 0
[2025-11-27 07:01:51] 2025-11-27 12:01:28,337 [wrapper] pandaids: 6896713862
[2025-11-27 07:01:51] 2025-11-27 12:01:28,737 [wrapper] cleanup supervisor_pilot 2300240 2469423
[2025-11-27 07:01:51] 2025-11-27 12:01:28,784 [wrapper] Test setup, not cleaning
[2025-11-27 07:01:51] 2025-11-27 12:01:28,809 [wrapper] apfmon messages muted
[2025-11-27 07:01:51] 2025-11-27 12:01:28,839 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:01:51] 2025-11-27 12:01:28,854 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:01:51]  *** Error codes and diagnostics ***
[2025-11-27 07:01:51]     "exeErrorCode": 0,
[2025-11-27 07:01:51]     "exeErrorDiag": "",
[2025-11-27 07:01:51]     "pilotErrorCode": 0,
[2025-11-27 07:01:51]     "pilotErrorDiag": "",
[2025-11-27 07:01:51]  *** Listing of results directory ***
[2025-11-27 07:01:51] total 1340708
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:10 queuedata.json
[2025-11-27 07:01:51] -rwx------. 1 boincer umatlas     36292 Nov 25 01:14 runpilot2-wrapper.sh
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:01:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-27 07:01:51] -rw-r--r--. 2 boincer umatlas 409215497 Nov 26 00:00 EVNT.47483658._002117.pool.root.1
[2025-11-27 07:01:51] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:00 input.tar.gz
[2025-11-27 07:01:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 07:01:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:00 pandaJob.out
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas    991877 Nov 26 00:01 agis_schedconf.cvmfs.json
[2025-11-27 07:01:51] drwx------. 5 boincer umatlas      4096 Nov 26 00:02 pilot3
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:37 boinc_task_state.xml
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 06:57 init_data.xml
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas 925484815 Nov 27 06:58 HITS.47556161._001004.pool.root.1
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas      1059 Nov 27 07:00 memory_monitor_summary.json
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas   2869551 Nov 27 07:00 log.47556161._001004.job.log.tgz.1
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas      8625 Nov 27 07:00 heartbeat.json
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas        95 Nov 27 07:01 pilot_heartbeat.json
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas      5009 Nov 27 07:01 pilotlog.txt
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas  14258116 Nov 27 07:01 log.47556161._001004.job.log.1
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas       353 Nov 27 07:01 output.list
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:01 runtime_log
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas  17152000 Nov 27 07:01 result.tar.gz
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas      9354 Nov 27 07:01 runtime_log.err
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas       665 Nov 27 07:01 12WLDmaU1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmICMKDm3Hx3ym.diag
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:01 boinc_mmap_file
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:01 wrapper_checkpoint.txt
[2025-11-27 07:01:51] -rw-r--r--. 1 boincer umatlas     21579 Nov 27 07:01 stderr.txt
[2025-11-27 07:01:51] HITS file was successfully produced:
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas 925484815 Nov 27 06:58 shared/HITS.pool.root.1
[2025-11-27 07:01:51]  *** Contents of shared directory: ***
[2025-11-27 07:01:51] total 1320780
[2025-11-27 07:01:51] -rw-r--r--. 2 boincer umatlas 409215497 Nov 26 00:00 ATLAS.root_0
[2025-11-27 07:01:51] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:00 input.tar.gz
[2025-11-27 07:01:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas 925484815 Nov 27 06:58 HITS.pool.root.1
[2025-11-27 07:01:51] -rw-------. 1 boincer umatlas  17152000 Nov 27 07:01 result.tar.gz
07:01:53 (2457814): run_atlas exited; CPU time 254565.387500
07:01:53 (2457814): called boinc_finish(0)

</stderr_txt>
]]>

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