Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:02 (1305140): wrapper (7.7.26015): starting
00:05:02 (1305140): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:05:02] Arguments: --nthreads 9
[2025-11-26 00:05:02] Threads: 9
[2025-11-26 00:05:02] Checking for CVMFS
[2025-11-26 00:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:05:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:05:06] 2.13.3.0 11541 29605 375708 153309 1 348 19551758 32935937 17739 16776704 0 64727192 99.315 115533277 40703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:05:06] CVMFS is ok
[2025-11-26 00:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:05:06] Further information can be found at the LHC@home message board.
[2025-11-26 00:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:05:06] Checking for apptainer binary...
[2025-11-26 00:05:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:05:06] Running /usr/bin/apptainer --version
[2025-11-26 00:05:06] apptainer version 1.4.4-1.el9
[2025-11-26 00:05:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:05:06] c6-1-26-1.aglt2.org
[2025-11-26 00:05:06] apptainer works
[2025-11-26 00:05:06] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:05:06] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:05:06] Starting ATLAS job with PandaID=6896713879
[2025-11-26 00:05:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:20:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:20:25] 2025-11-26 23:21:12,068 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:20:25] 2025-11-26 23:21:12,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:20:25] 2025-11-26 23:21:12,085 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:20:25] 2025-11-26 23:21:12,087 | INFO     | sum of square deviations: 385210365916.3436
[2025-11-26 19:20:25] 2025-11-26 23:21:12,113 | INFO     | sum of deviations: 3224436524259.977
[2025-11-26 19:20:25] 2025-11-26 23:21:12,113 | INFO     | mean x: 1764166432.179535
[2025-11-26 19:20:25] 2025-11-26 23:21:12,113 | INFO     | mean y: 3031976.9172093025
[2025-11-26 19:20:25] 2025-11-26 23:21:12,113 | INFO     | intersect: -14764074991.404787
[2025-11-26 19:20:25] 2025-11-26 23:21:12,115 | INFO     | chi2: 14.045884039702566
[2025-11-26 19:20:25] 2025-11-26 23:21:12,116 | INFO     | sum of square deviations: 379860615126.8614
[2025-11-26 19:20:25] 2025-11-26 23:21:12,140 | INFO     | sum of deviations: 3626090539042.304
[2025-11-26 19:20:25] 2025-11-26 23:21:12,140 | INFO     | mean x: 1764166279.6850467
[2025-11-26 19:20:25] 2025-11-26 23:21:12,140 | INFO     | mean y: 3043425.1878504674
[2025-11-26 19:20:25] 2025-11-26 23:21:12,140 | INFO     | intersect: -16837414367.276375
[2025-11-26 19:20:25] 2025-11-26 23:21:12,142 | INFO     | chi2: 10.47196541963223
[2025-11-26 19:20:25] 2025-11-26 23:21:12,142 | INFO     | current chi2=10.47196541963223 (change=25.444597221279754 %)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,143 | INFO     | sum of square deviations: 374560632712.30634
[2025-11-26 19:20:25] 2025-11-26 23:21:12,166 | INFO     | sum of deviations: 4020979444713.555
[2025-11-26 19:20:25] 2025-11-26 23:21:12,167 | INFO     | mean x: 1764166127.1906104
[2025-11-26 19:20:25] 2025-11-26 23:21:12,167 | INFO     | mean y: 3054783.1154929576
[2025-11-26 19:20:25] 2025-11-26 23:21:12,167 | INFO     | intersect: -18935603247.030178
[2025-11-26 19:20:25] 2025-11-26 23:21:12,168 | INFO     | chi2: 6.964013519120668
[2025-11-26 19:20:25] 2025-11-26 23:21:12,168 | INFO     | current chi2=6.964013519120668 (change=33.49850538978155 %)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,170 | INFO     | sum of square deviations: 369309991341.3536
[2025-11-26 19:20:25] 2025-11-26 23:21:12,192 | INFO     | sum of deviations: 4159021191829.4355
[2025-11-26 19:20:25] 2025-11-26 23:21:12,193 | INFO     | mean x: 1764165974.6933963
[2025-11-26 19:20:25] 2025-11-26 23:21:12,193 | INFO     | mean y: 3058789.819811321
[2025-11-26 19:20:25] 2025-11-26 23:21:12,193 | INFO     | intersect: -19864271763.586422
[2025-11-26 19:20:25] 2025-11-26 23:21:12,194 | INFO     | chi2: 6.330981739176034
[2025-11-26 19:20:25] 2025-11-26 23:21:12,194 | INFO     | current chi2=6.330981739176034 (change=9.09004237580179 %)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,194 | INFO     | right removable region: 1059
[2025-11-26 19:20:25] 2025-11-26 23:21:12,196 | INFO     | sum of square deviations: 379859841646.8614
[2025-11-26 19:20:25] 2025-11-26 23:21:12,217 | INFO     | sum of deviations: 2769461490307.4487
[2025-11-26 19:20:25] 2025-11-26 23:21:12,218 | INFO     | mean x: 1764166584.6850467
[2025-11-26 19:20:25] 2025-11-26 23:21:12,218 | INFO     | mean y: 3044943.553271028
[2025-11-26 19:20:25] 2025-11-26 23:21:12,218 | INFO     | intersect: -12859044919.8826
[2025-11-26 19:20:25] 2025-11-26 23:21:12,219 | INFO     | chi2: 9.937489829856865
[2025-11-26 19:20:25] 2025-11-26 23:21:12,219 | INFO     | current chi2=9.937489829856865 (change=29.249808685824092 %)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,220 | INFO     | sum of square deviations: 374559215805.06494
[2025-11-26 19:20:25] 2025-11-26 23:21:12,245 | INFO     | sum of deviations: 2493072806765.369
[2025-11-26 19:20:25] 2025-11-26 23:21:12,246 | INFO     | mean x: 1764166737.1887324
[2025-11-26 19:20:25] 2025-11-26 23:21:12,246 | INFO     | mean y: 3052888.4807511736
[2025-11-26 19:20:25] 2025-11-26 23:21:12,246 | INFO     | intersect: -11739272312.707748
[2025-11-26 19:20:25] 2025-11-26 23:21:12,247 | INFO     | chi2: 8.428791930936539
[2025-11-26 19:20:25] 2025-11-26 23:21:12,247 | INFO     | current chi2=8.428791930936539 (change=15.181881186811308 %)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,248 | INFO     | left removable region: 20
[2025-11-26 19:20:25] 2025-11-26 23:21:12,249 | INFO     | sum of square deviations: 347791604241.55505
[2025-11-26 19:20:25] 2025-11-26 23:21:12,288 | INFO     | sum of deviations: 3234768104650.0977
[2025-11-26 19:20:25] 2025-11-26 23:21:12,289 | INFO     | mean x: 1764166554.2021174
[2025-11-26 19:20:25] 2025-11-26 23:21:12,289 | INFO     | mean y: 3087152.499518768
[2025-11-26 19:20:25] 2025-11-26 23:21:12,289 | INFO     | intersect: -16405214920.427948
[2025-11-26 19:20:25] 2025-11-26 23:21:12,290 | INFO     | chi2: 0.3651809587982127
[2025-11-26 19:20:25] 2025-11-26 23:21:12,290 | INFO     | current memory leak: 9.30 B/s (using 1039 data points, chi2=0.37)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,298 | INFO     | could have reported an average CPU frequency of 2973 MHz (40 samples)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | ..............................
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . Timing measurements:
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . get job = 0 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . initial setup = 4 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . payload setup = 33 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . stage-in = 0 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . payload execution = 65582 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . stage-out = 6 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | . log creation = 1 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,299 | INFO     | ..............................
[2025-11-26 19:20:25] 2025-11-26 23:21:12,400 | INFO     | 
[2025-11-26 19:20:25] 2025-11-26 23:21:12,400 | INFO     | job summary report
[2025-11-26 19:20:25] 2025-11-26 23:21:12,400 | INFO     | --------------------------------------------------
[2025-11-26 19:20:25] 2025-11-26 23:21:12,400 | INFO     | PanDA job id: 6896713879
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | task id: 47556173
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | errors: (none)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | pilot state: finished 
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | transexitcode: 0
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | exeerrorcode: 0
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | exeerrordiag: 
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | exitcode: 0
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | exitmsg: OK
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | cpuconsumptiontime: 238261 s
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | nevents: 1000
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | neventsw: 0
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | pid: 1329931
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | pgrp: 1329931
[2025-11-26 19:20:25] 2025-11-26 23:21:12,401 | INFO     | corecount: 9
[2025-11-26 19:20:25] 2025-11-26 23:21:12,402 | INFO     | event service: False
[2025-11-26 19:20:25] 2025-11-26 23:21:12,402 | INFO     | sizes: {0: 2284262, 1: 2284262, 12: 2284290, 23: 2284608, 34: 2284608, 65619: 2340903, 65626: 2349897, 65628: 2349953, 65655: 2349977}
[2025-11-26 19:20:25] 2025-11-26 23:21:12,402 | INFO     | --------------------------------------------------
[2025-11-26 19:20:25] 2025-11-26 23:21:12,402 | INFO     | 
[2025-11-26 19:20:25] 2025-11-26 23:21:12,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 19:20:25] 2025-11-26 23:21:12,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:20:25] 2025-11-26 23:21:12,474 | INFO     | job 6896713879 has completed (purged errors)
[2025-11-26 19:20:25] 2025-11-26 23:21:12,474 | INFO     | overall cleanup function is called
[2025-11-26 19:20:25] 2025-11-26 23:21:13,510 | INFO     | --- collectZombieJob: --- 10, [1329931]
[2025-11-26 19:20:25] 2025-11-26 23:21:13,510 | INFO     | zombie collector waiting for pid 1329931
[2025-11-26 19:20:25] 2025-11-26 23:21:13,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:20:25] 2025-11-26 23:21:13,511 | INFO     | collected zombie processes
[2025-11-26 19:20:25] 2025-11-26 23:21:13,511 | INFO     | will attempt to kill all subprocesses of pid=1329931
[2025-11-26 19:20:25] 2025-11-26 23:21:15,157 | INFO     | process IDs to be killed: [1329931] (in reverse order)
[2025-11-26 19:20:25] 2025-11-26 23:21:15,301 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:20:25] 2025-11-26 23:21:15,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:20:25] 2025-11-26 23:21:15,322 | INFO     | did not find any defunct processes belonging to 1329931
[2025-11-26 19:20:25] 2025-11-26 23:21:15,358 | INFO     | did not find any defunct processes belonging to 1329931
[2025-11-26 19:20:25] 2025-11-26 23:21:15,359 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:20:25] 2025-11-26 23:21:15,360 | INFO     | ready for new job
[2025-11-26 19:20:25] 2025-11-26 23:21:15,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:20:25] 2025-11-26 23:21:15,365 | INFO     | ***************************************
[2025-11-26 19:20:25] 2025-11-26 23:21:15,365 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:20:25] 2025-11-26 23:21:15,365 | INFO     | ***************************************
[2025-11-26 19:20:25] 2025-11-26 23:21:15,365 | INFO     | 
[2025-11-26 19:20:25] 2025-11-26 23:21:15,373 | INFO     | architecture information:
[2025-11-26 19:20:25] 2025-11-26 23:21:15,389 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:20:25] 2025-11-26 23:21:15,448 | INFO     | cat /etc/os-release:
[2025-11-26 19:20:25] NAME="CentOS Linux"
[2025-11-26 19:20:25] VERSION="7 (Core)"
[2025-11-26 19:20:25] ID="centos"
[2025-11-26 19:20:25] ID_LIKE="rhel fedora"
[2025-11-26 19:20:25] VERSION_ID="7"
[2025-11-26 19:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:20:25] ANSI_COLOR="0;31"
[2025-11-26 19:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:20:25] HOME_URL="https://www.centos.org/"
[2025-11-26 19:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:20:25] 
[2025-11-26 19:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:20:25] 
[2025-11-26 19:20:25] 2025-11-26 23:21:15,448 | INFO     | ***************************************
[2025-11-26 19:20:25] 2025-11-26 23:21:15,952 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 19:20:25] 2025-11-26 23:21:15,990 | INFO     | sufficient remaining disk space (70030196736 B)
[2025-11-26 19:20:25] 2025-11-26 23:21:15,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:20:25] 2025-11-26 23:21:15,991 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:20:25] 2025-11-26 23:21:15,991 | INFO     | update_server=False
[2025-11-26 19:20:25] 2025-11-26 23:21:15,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:20:25] 2025-11-26 23:21:15,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:20:25] 2025-11-26 23:21:15,991 | INFO     | aborting loop
[2025-11-26 19:20:25] 2025-11-26 23:21:16,277 | INFO     | all data control threads have been joined
[2025-11-26 19:20:25] 2025-11-26 23:21:16,500 | INFO     | all job control threads have been joined
[2025-11-26 19:20:25] 2025-11-26 23:21:16,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:20:25] 2025-11-26 23:21:16,998 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,004 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,169 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,225 | INFO     | all payload control threads have been joined
[2025-11-26 19:20:25] 2025-11-26 23:21:17,263 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,320 | INFO     | [job] validate thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,324 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,344 | INFO     | [data] control thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,345 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:20:25] 2025-11-26 23:21:17,505 | INFO     | [job] control thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,947 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:17,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:20:25] 2025-11-26 23:21:18,052 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:18,231 | INFO     | [payload] control thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:18,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:18,433 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:18,699 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:22,028 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:20:25] 2025-11-26 23:21:44,903 | INFO     | PID=1313606 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:20:25] 2025-11-26 23:21:44,903 | INFO     | .. there are 26 such processes running
[2025-11-26 19:20:25] 2025-11-26 23:21:44,904 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:20:25] 2025-11-26 23:21:44,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:20:25] 2025-11-26 23:21:44,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:20:25] 2025-11-26 23:21:51,526 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:20:25] 2025-11-26 23:21:52,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248174696256)>', '<ExcThread(monitor, started 140247451035392)>']
[2025-11-26 19:20:25] 2025-11-26 23:21:52,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:20:25] 2025-11-26 23:21:52,952 | INFO     | [monitor] control thread has ended
[2025-11-26 19:20:25] 2025-11-26 23:21:57,526 | INFO     | all workflow threads have been joined
[2025-11-26 19:20:25] 2025-11-26 23:21:57,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:20:25] 2025-11-26 23:21:57,527 | INFO     | traces error code: 0
[2025-11-26 19:20:25] 2025-11-26 23:21:57,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:20:25] 2025-11-26 23:21:57,769 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:20:25] 2025-11-26 23:21:57,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:20:25] 2025-11-26 23:21:57,775 [wrapper] pilotpid: 1313606
[2025-11-26 19:20:25] 2025-11-26 23:21:57,777 [wrapper] Pilot exit status: 0
[2025-11-26 19:20:25] 2025-11-26 23:21:57,788 [wrapper] pandaids: 6896713879
[2025-11-26 19:20:25] 2025-11-26 23:21:57,860 [wrapper] cleanup supervisor_pilot 1185221 1313607
[2025-11-26 19:20:25] 2025-11-26 23:21:57,863 [wrapper] Test setup, not cleaning
[2025-11-26 19:20:25] 2025-11-26 23:21:57,866 [wrapper] apfmon messages muted
[2025-11-26 19:20:25] 2025-11-26 23:21:57,869 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:20:25] 2025-11-26 23:21:57,871 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:20:25]  *** Error codes and diagnostics ***
[2025-11-26 19:20:25]     "exeErrorCode": 0,
[2025-11-26 19:20:25]     "exeErrorDiag": "",
[2025-11-26 19:20:25]     "pilotErrorCode": 0,
[2025-11-26 19:20:25]     "pilotErrorDiag": "",
[2025-11-26 19:20:25]  *** Listing of results directory ***
[2025-11-26 19:20:25] total 1309460
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:21 queuedata.json
[2025-11-26 19:20:25] -rwx------. 1 boincer umatlas     36292 Nov 25 01:24 runpilot2-wrapper.sh
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:20:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:05 run_atlas
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:05 job.xml
[2025-11-26 19:20:25] -rw-r--r--. 2 boincer umatlas 409221621 Nov 26 00:05 EVNT.47483658._003069.pool.root.1
[2025-11-26 19:20:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:05 shared
[2025-11-26 19:20:25] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 00:05 input.tar.gz
[2025-11-26 19:20:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:05 start_atlas.sh
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:05 boinc_lockfile
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:05 pandaJob.out
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas        57 Nov 26 00:05 setup.sh.local
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 19:20:25] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:01 boinc_task_state.xml
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas 905314873 Nov 26 18:19 HITS.47556173._000515.pool.root.1
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas      1058 Nov 26 18:20 memory_monitor_summary.json
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas   2345391 Nov 26 18:20 log.47556173._000515.job.log.tgz.1
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas      8619 Nov 26 18:21 heartbeat.json
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas        95 Nov 26 18:21 pilot_heartbeat.json
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas      4824 Nov 26 18:21 pilotlog.txt
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas   8866526 Nov 26 18:21 log.47556173._000515.job.log.1
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas       353 Nov 26 18:21 output.list
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:21 runtime_log
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas  11233280 Nov 26 18:21 result.tar.gz
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 18:21 runtime_log.err
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas       661 Nov 26 18:21 5DpMDmee1h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbNJKDmvcND9m.diag
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 19:13 init_data.xml
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:20 boinc_mmap_file
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:20 wrapper_checkpoint.txt
[2025-11-26 19:20:25] -rw-r--r--. 1 boincer umatlas     21149 Nov 26 19:20 stderr.txt
[2025-11-26 19:20:25] HITS file was successfully produced:
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas 905314873 Nov 26 18:19 shared/HITS.pool.root.1
[2025-11-26 19:20:25]  *** Contents of shared directory: ***
[2025-11-26 19:20:25] total 1295308
[2025-11-26 19:20:25] -rw-r--r--. 2 boincer umatlas 409221621 Nov 26 00:05 ATLAS.root_0
[2025-11-26 19:20:25] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 00:05 input.tar.gz
[2025-11-26 19:20:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:05 start_atlas.sh
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas 905314873 Nov 26 18:19 HITS.pool.root.1
[2025-11-26 19:20:25] -rw-------. 1 boincer umatlas  11233280 Nov 26 18:21 result.tar.gz
19:20:47 (1305140): run_atlas exited; CPU time 239192.753436
19:20:47 (1305140): called boinc_finish(0)

</stderr_txt>
]]>

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