Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (2850320): wrapper (7.7.26015): starting
00:01:53 (2850320): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:01:53] Arguments: --nthreads 8
[2025-11-26 00:01:53] Threads: 8
[2025-11-26 00:01:53] Checking for CVMFS
[2025-11-26 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:01:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:01:54] 2.13.3.0 11379 29604 325744 153309 1 189 31045845 32935937 28938 16776704 0 105902784 99.424 151880490 39324 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:01:54] CVMFS is ok
[2025-11-26 00:01:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:01:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:01:54] Further information can be found at the LHC@home message board.
[2025-11-26 00:01:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:01:54] Checking for apptainer binary...
[2025-11-26 00:01:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:01:54] Running /usr/bin/apptainer --version
[2025-11-26 00:01:54] apptainer version 1.4.4-1.el9
[2025-11-26 00:01:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:01:55] c6-4-5-1.aglt2.org
[2025-11-26 00:01:55] apptainer works
[2025-11-26 00:01:55] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:01:55] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:01:55] Starting ATLAS job with PandaID=6896714101
[2025-11-26 00:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:40:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:40:37] 2025-11-26 15:40:03,335 | INFO     | chi2: 9.266002066879695
[2025-11-26 10:40:37] 2025-11-26 15:40:03,336 | INFO     | sum of square deviations: 74253852917.35727
[2025-11-26 10:40:37] 2025-11-26 15:40:03,351 | INFO     | sum of deviations: 621778383987.2942
[2025-11-26 10:40:37] 2025-11-26 15:40:03,356 | INFO     | mean x: 1764152315.5974236
[2025-11-26 10:40:37] 2025-11-26 15:40:03,356 | INFO     | mean y: 2853196.309178744
[2025-11-26 10:40:37] 2025-11-26 15:40:03,356 | INFO     | intersect: -14769602815.104061
[2025-11-26 10:40:37] 2025-11-26 15:40:03,356 | INFO     | chi2: 6.633074490174741
[2025-11-26 10:40:37] 2025-11-26 15:40:03,357 | INFO     | current chi2=6.633074490174741 (change=28.414925419842756 %)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,357 | INFO     | sum of square deviations: 72475037068.34853
[2025-11-26 10:40:37] 2025-11-26 15:40:03,368 | INFO     | sum of deviations: 809925568215.8329
[2025-11-26 10:40:37] 2025-11-26 15:40:03,373 | INFO     | mean x: 1764152163.1185064
[2025-11-26 10:40:37] 2025-11-26 15:40:03,373 | INFO     | mean y: 2869325.426948052
[2025-11-26 10:40:37] 2025-11-26 15:40:03,373 | INFO     | intersect: -19711945608.513252
[2025-11-26 10:40:37] 2025-11-26 15:40:03,374 | INFO     | chi2: 3.989200473062076
[2025-11-26 10:40:37] 2025-11-26 15:40:03,374 | INFO     | current chi2=3.989200473062076 (change=39.85895260227984 %)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,374 | INFO     | sum of square deviations: 70724648090.40585
[2025-11-26 10:40:37] 2025-11-26 15:40:03,389 | INFO     | sum of deviations: 902544586132.7987
[2025-11-26 10:40:37] 2025-11-26 15:40:03,389 | INFO     | mean x: 1764152010.6301146
[2025-11-26 10:40:37] 2025-11-26 15:40:03,390 | INFO     | mean y: 2877360.3044189853
[2025-11-26 10:40:37] 2025-11-26 15:40:03,390 | INFO     | intersect: -22510148710.52441
[2025-11-26 10:40:37] 2025-11-26 15:40:03,390 | INFO     | chi2: 2.736830762368639
[2025-11-26 10:40:37] 2025-11-26 15:40:03,390 | INFO     | current chi2=2.736830762368639 (change=31.394002862235915 %)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,391 | INFO     | sum of square deviations: 69002529770.90446
[2025-11-26 10:40:37] 2025-11-26 15:40:03,406 | INFO     | sum of deviations: 888909732572.5638
[2025-11-26 10:40:37] 2025-11-26 15:40:03,406 | INFO     | mean x: 1764151858.1353135
[2025-11-26 10:40:37] 2025-11-26 15:40:03,406 | INFO     | mean y: 2876153.0297029703
[2025-11-26 10:40:37] 2025-11-26 15:40:03,406 | INFO     | intersect: -22723417529.809834
[2025-11-26 10:40:37] 2025-11-26 15:40:03,407 | INFO     | chi2: 2.7341032419960576
[2025-11-26 10:40:37] 2025-11-26 15:40:03,407 | INFO     | current chi2=2.7341032419960576 (change=0.09965981127094004 %)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,407 | INFO     | right removable region: 605
[2025-11-26 10:40:37] 2025-11-26 15:40:03,408 | INFO     | sum of square deviations: 74252944877.73953
[2025-11-26 10:40:37] 2025-11-26 15:40:03,424 | INFO     | sum of deviations: 258860474574.86957
[2025-11-26 10:40:37] 2025-11-26 15:40:03,425 | INFO     | mean x: 1764152620.594203
[2025-11-26 10:40:37] 2025-11-26 15:40:03,425 | INFO     | mean y: 2852526.1304347827
[2025-11-26 10:40:37] 2025-11-26 15:40:03,425 | INFO     | intersect: -6147332969.427213
[2025-11-26 10:40:37] 2025-11-26 15:40:03,426 | INFO     | chi2: 6.817470176578341
[2025-11-26 10:40:37] 2025-11-26 15:40:03,426 | INFO     | current chi2=6.817470176578341 (change=26.424901188543455 %)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,426 | INFO     | sum of square deviations: 72473259730.49263
[2025-11-26 10:40:37] 2025-11-26 15:40:03,437 | INFO     | sum of deviations: 214906690966.18896
[2025-11-26 10:40:37] 2025-11-26 15:40:03,437 | INFO     | mean x: 1764152773.1103897
[2025-11-26 10:40:37] 2025-11-26 15:40:03,437 | INFO     | mean y: 2856291.423701299
[2025-11-26 10:40:37] 2025-11-26 15:40:03,438 | INFO     | intersect: -5228428133.174413
[2025-11-26 10:40:37] 2025-11-26 15:40:03,438 | INFO     | chi2: 6.737775532841471
[2025-11-26 10:40:37] 2025-11-26 15:40:03,443 | INFO     | current chi2=6.737775532841471 (change=1.1689767857095232 %)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,443 | INFO     | left removable region: 20
[2025-11-26 10:40:37] 2025-11-26 15:40:03,443 | INFO     | sum of square deviations: 62072275595.75419
[2025-11-26 10:40:37] 2025-11-26 15:40:03,458 | INFO     | sum of deviations: 597874469561.221
[2025-11-26 10:40:37] 2025-11-26 15:40:03,458 | INFO     | mean x: 1764152437.6871796
[2025-11-26 10:40:37] 2025-11-26 15:40:03,458 | INFO     | mean y: 2902254.842735043
[2025-11-26 10:40:37] 2025-11-26 15:40:03,458 | INFO     | intersect: -16989252338.882242
[2025-11-26 10:40:37] 2025-11-26 15:40:03,459 | INFO     | chi2: 0.10092629257388715
[2025-11-26 10:40:37] 2025-11-26 15:40:03,459 | INFO     | current memory leak: 9.63 B/s (using 585 data points, chi2=0.10)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | could have reported an average CPU frequency of 3031 MHz (24 samples)
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | ..............................
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . Timing measurements:
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . get job = 0 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . initial setup = 3 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . payload setup = 13 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . stage-in = 0 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . payload execution = 38191 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . stage-out = 4 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | . log creation = 0 s
[2025-11-26 10:40:37] 2025-11-26 15:40:03,460 | INFO     | ..............................
[2025-11-26 10:40:37] 2025-11-26 15:40:03,661 | INFO     | time since job start (38262s) is within the limit (172800.0s)
[2025-11-26 10:40:37] 2025-11-26 15:40:04,112 | INFO     | 
[2025-11-26 10:40:37] 2025-11-26 15:40:04,117 | INFO     | job summary report
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | --------------------------------------------------
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | PanDA job id: 6896714101
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | task id: 47556161
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | errors: (none)
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | pilot state: finished 
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | transexitcode: 0
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | exeerrorcode: 0
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | exeerrordiag: 
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | exitcode: 0
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | exitmsg: OK
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | cpuconsumptiontime: 236620 s
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | nevents: 1000
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | neventsw: 0
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | pid: 2870563
[2025-11-26 10:40:37] 2025-11-26 15:40:04,118 | INFO     | pgrp: 2870563
[2025-11-26 10:40:37] 2025-11-26 15:40:04,119 | INFO     | corecount: 8
[2025-11-26 10:40:37] 2025-11-26 15:40:04,119 | INFO     | event service: False
[2025-11-26 10:40:37] 2025-11-26 15:40:04,119 | INFO     | sizes: {0: 2284207, 11: 2284497, 22: 2284497, 38209: 2328271, 38214: 2337321, 38227: 2337511}
[2025-11-26 10:40:37] 2025-11-26 15:40:04,119 | INFO     | --------------------------------------------------
[2025-11-26 10:40:37] 2025-11-26 15:40:04,119 | INFO     | 
[2025-11-26 10:40:37] 2025-11-26 15:40:04,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | job 6896714101 has completed (purged errors)
[2025-11-26 10:40:37] 2025-11-26 15:40:04,232 | INFO     | overall cleanup function is called
[2025-11-26 10:40:37] 2025-11-26 15:40:05,254 | INFO     | --- collectZombieJob: --- 10, [2870563]
[2025-11-26 10:40:37] 2025-11-26 15:40:05,255 | INFO     | zombie collector waiting for pid 2870563
[2025-11-26 10:40:37] 2025-11-26 15:40:05,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:40:37] 2025-11-26 15:40:05,255 | INFO     | collected zombie processes
[2025-11-26 10:40:37] 2025-11-26 15:40:05,255 | INFO     | will attempt to kill all subprocesses of pid=2870563
[2025-11-26 10:40:37] 2025-11-26 15:40:05,692 | INFO     | process IDs to be killed: [2870563] (in reverse order)
[2025-11-26 10:40:37] 2025-11-26 15:40:05,843 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:40:37] 2025-11-26 15:40:05,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:40:37] 2025-11-26 15:40:05,872 | INFO     | did not find any defunct processes belonging to 2870563
[2025-11-26 10:40:37] 2025-11-26 15:40:05,888 | INFO     | did not find any defunct processes belonging to 2870563
[2025-11-26 10:40:37] 2025-11-26 15:40:05,889 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:40:37] 2025-11-26 15:40:05,889 | INFO     | ready for new job
[2025-11-26 10:40:37] 2025-11-26 15:40:05,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:40:37] 2025-11-26 15:40:05,892 | INFO     | ***************************************
[2025-11-26 10:40:37] 2025-11-26 15:40:05,892 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:40:37] 2025-11-26 15:40:05,892 | INFO     | ***************************************
[2025-11-26 10:40:37] 2025-11-26 15:40:05,892 | INFO     | 
[2025-11-26 10:40:37] 2025-11-26 15:40:05,896 | INFO     | architecture information:
[2025-11-26 10:40:37] 2025-11-26 15:40:05,896 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:40:37] 2025-11-26 15:40:05,920 | INFO     | cat /etc/os-release:
[2025-11-26 10:40:37] NAME="CentOS Linux"
[2025-11-26 10:40:37] VERSION="7 (Core)"
[2025-11-26 10:40:37] ID="centos"
[2025-11-26 10:40:37] ID_LIKE="rhel fedora"
[2025-11-26 10:40:37] VERSION_ID="7"
[2025-11-26 10:40:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:40:37] ANSI_COLOR="0;31"
[2025-11-26 10:40:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:40:37] HOME_URL="https://www.centos.org/"
[2025-11-26 10:40:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:40:37] 
[2025-11-26 10:40:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:40:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:40:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:40:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:40:37] 
[2025-11-26 10:40:37] 2025-11-26 15:40:05,920 | INFO     | ***************************************
[2025-11-26 10:40:37] 2025-11-26 15:40:06,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 10:40:37] 2025-11-26 15:40:06,447 | INFO     | sufficient remaining disk space (69245861888 B)
[2025-11-26 10:40:37] 2025-11-26 15:40:06,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:40:37] 2025-11-26 15:40:06,448 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:40:37] 2025-11-26 15:40:06,448 | INFO     | update_server=False
[2025-11-26 10:40:37] 2025-11-26 15:40:06,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:40:37] 2025-11-26 15:40:06,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:40:37] 2025-11-26 15:40:06,448 | INFO     | aborting loop
[2025-11-26 10:40:37] 2025-11-26 15:40:06,648 | INFO     | all job control threads have been joined
[2025-11-26 10:40:37] 2025-11-26 15:40:07,264 | INFO     | all payload control threads have been joined
[2025-11-26 10:40:37] 2025-11-26 15:40:07,453 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:07,454 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:07,458 | INFO     | all data control threads have been joined
[2025-11-26 10:40:37] 2025-11-26 15:40:07,619 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:07,653 | INFO     | [job] control thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:07,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:40:37] 2025-11-26 15:40:08,101 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,137 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,224 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,224 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,270 | INFO     | [payload] control thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,464 | INFO     | [data] control thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,483 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,568 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:08,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:40:37] 2025-11-26 15:40:08,923 | INFO     | [job] validate thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:09,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:40:37] 2025-11-26 15:40:09,660 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:09,929 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:13,597 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:40:37] 2025-11-26 15:40:26,887 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:40:37] 2025-11-26 15:40:27,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929704740672)>', '<ExcThread(monitor, started 139929204016896)>']
[2025-11-26 10:40:37] 2025-11-26 15:40:32,161 | INFO     | all workflow threads have been joined
[2025-11-26 10:40:37] 2025-11-26 15:40:32,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:40:37] 2025-11-26 15:40:32,162 | INFO     | traces error code: 0
[2025-11-26 10:40:37] 2025-11-26 15:40:32,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:40:37] 2025-11-26 15:40:37,328 | INFO     | PID=2859224 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:40:37] 2025-11-26 15:40:37,330 | INFO     | .. there are 47 such processes running
[2025-11-26 10:40:37] 2025-11-26 15:40:37,330 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:40:37] 2025-11-26 15:40:37,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:40:37] 2025-11-26 15:40:37,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:40:37] 2025-11-26 15:40:37,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:40:37] 2025-11-26 15:40:37,331 | INFO     | [monitor] control thread has ended
[2025-11-26 10:40:37] 2025-11-26 15:40:37,530 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:40:37] 2025-11-26 15:40:37,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:40:37] 2025-11-26 15:40:37,547 [wrapper] pilotpid: 2859224
[2025-11-26 10:40:37] 2025-11-26 15:40:37,549 [wrapper] Pilot exit status: 0
[2025-11-26 10:40:37] 2025-11-26 15:40:37,565 [wrapper] pandaids: 6896714101
[2025-11-26 10:40:37] 2025-11-26 15:40:37,666 [wrapper] cleanup supervisor_pilot 1476141 2859225
[2025-11-26 10:40:37] 2025-11-26 15:40:37,669 [wrapper] Test setup, not cleaning
[2025-11-26 10:40:37] 2025-11-26 15:40:37,673 [wrapper] apfmon messages muted
[2025-11-26 10:40:37] 2025-11-26 15:40:37,677 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:40:37] 2025-11-26 15:40:37,681 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:40:37]  *** Error codes and diagnostics ***
[2025-11-26 10:40:37]     "exeErrorCode": 0,
[2025-11-26 10:40:37]     "exeErrorDiag": "",
[2025-11-26 10:40:37]     "pilotErrorCode": 0,
[2025-11-26 10:40:37]     "pilotErrorDiag": "",
[2025-11-26 10:40:37]  *** Listing of results directory ***
[2025-11-26 10:40:37] total 1322584
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-26 10:40:37] -rwx------. 1 boincer umatlas     36292 Nov 25 01:27 runpilot2-wrapper.sh
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:27 queuedata.json
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:40:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:01 run_atlas
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:01 job.xml
[2025-11-26 10:40:37] -rw-r--r--. 2 boincer umatlas 410838778 Nov 26 00:01 EVNT.47483658._002120.pool.root.1
[2025-11-26 10:40:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:01 shared
[2025-11-26 10:40:37] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:01 input.tar.gz
[2025-11-26 10:40:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:01 start_atlas.sh
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:01 boinc_lockfile
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas      2781 Nov 26 00:01 pandaJob.out
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas        57 Nov 26 00:01 setup.sh.local
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas    991877 Nov 26 00:02 agis_schedconf.cvmfs.json
[2025-11-26 10:40:37] drwx------. 5 boincer umatlas      4096 Nov 26 00:02 pilot3
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas       533 Nov 26 10:24 boinc_task_state.xml
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas      6877 Nov 26 10:36 init_data.xml
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas 925339982 Nov 26 10:39 HITS.47556161._001031.pool.root.1
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas      1057 Nov 26 10:39 memory_monitor_summary.json
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:39 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas   1891794 Nov 26 10:39 log.47556161._001031.job.log.tgz.1
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas      8613 Nov 26 10:40 heartbeat.json
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:40 boinc_mmap_file
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas        29 Nov 26 10:40 wrapper_checkpoint.txt
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas        95 Nov 26 10:40 pilot_heartbeat.json
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas       823 Nov 26 10:40 pilotlog.txt
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas   5222158 Nov 26 10:40 log.47556161._001031.job.log.1
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas       353 Nov 26 10:40 output.list
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:40 runtime_log
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas   7137280 Nov 26 10:40 result.tar.gz
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas       660 Nov 26 10:40 UZAODmTh1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjCMKDmCMXI7n.diag
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 10:40 runtime_log.err
[2025-11-26 10:40:37] -rw-r--r--. 1 boincer umatlas     21137 Nov 26 10:40 stderr.txt
[2025-11-26 10:40:37] HITS file was successfully produced:
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas 925339982 Nov 26 10:39 shared/HITS.pool.root.1
[2025-11-26 10:40:37]  *** Contents of shared directory: ***
[2025-11-26 10:40:37] total 1312440
[2025-11-26 10:40:37] -rw-r--r--. 2 boincer umatlas 410838778 Nov 26 00:01 ATLAS.root_0
[2025-11-26 10:40:37] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:01 input.tar.gz
[2025-11-26 10:40:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:01 start_atlas.sh
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas 925339982 Nov 26 10:39 HITS.pool.root.1
[2025-11-26 10:40:37] -rw-------. 1 boincer umatlas   7137280 Nov 26 10:40 result.tar.gz
10:40:39 (2850320): run_atlas exited; CPU time 237685.616287
10:40:39 (2850320): called boinc_finish(0)

</stderr_txt>
]]>

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