Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:18 (2695563): wrapper (7.7.26015): starting
10:23:18 (2695563): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 10:23:18] Arguments: --nthreads 9
[2025-11-26 10:23:18] Threads: 9
[2025-11-26 10:23:18] Checking for CVMFS
[2025-11-26 10:23:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:23:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:23:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:23:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:23:19] 2.13.3.0 5308 8610 218744 153326 1 149 18682207 32935937 20769 16776704 0 23682377 99.407 43620861 41822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:23:19] CVMFS is ok
[2025-11-26 10:23:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:23:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:23:19] Further information can be found at the LHC@home message board.
[2025-11-26 10:23:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:23:19] Checking for apptainer binary...
[2025-11-26 10:23:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:23:19] Running /usr/bin/apptainer --version
[2025-11-26 10:23:19] apptainer version 1.4.4-1.el9
[2025-11-26 10:23:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:23:19] c6-1-24-1.aglt2.org
[2025-11-26 10:23:19] apptainer works
[2025-11-26 10:23:19] Set ATHENA_PROC_NUMBER=9
[2025-11-26 10:23:19] Set ATHENA_CORE_NUMBER=9
[2025-11-26 10:23:19] Starting ATLAS job with PandaID=6896714135
[2025-11-26 10:23:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:45:32]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:45:32] 2025-11-27 02:25:56,073 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:45:32] 2025-11-27 02:25:56,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:45:32] 2025-11-27 02:25:56,083 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:45:32] 2025-11-27 02:25:56,084 | INFO     | sum of square deviations: 85550563043.38556
[2025-11-26 22:45:32] 2025-11-27 02:25:56,093 | INFO     | sum of deviations: 1152635359019.1865
[2025-11-26 22:45:32] 2025-11-27 02:25:56,093 | INFO     | mean x: 1764190476.969278
[2025-11-26 22:45:32] 2025-11-27 02:25:56,093 | INFO     | mean y: 3068786.9093702
[2025-11-26 22:45:32] 2025-11-27 02:25:56,093 | INFO     | intersect: -23766129818.697395
[2025-11-26 22:45:32] 2025-11-27 02:25:56,094 | INFO     | chi2: 6.628373956724994
[2025-11-26 22:45:32] 2025-11-27 02:25:56,095 | INFO     | sum of square deviations: 83594653701.1518
[2025-11-26 22:45:32] 2025-11-27 02:25:56,103 | INFO     | sum of deviations: 1390439138909.2537
[2025-11-26 22:45:32] 2025-11-27 02:25:56,103 | INFO     | mean x: 1764190324.4767802
[2025-11-26 22:45:32] 2025-11-27 02:25:56,103 | INFO     | mean y: 3087335.5835913313
[2025-11-26 22:45:32] 2025-11-27 02:25:56,103 | INFO     | intersect: -29340885837.71197
[2025-11-26 22:45:32] 2025-11-27 02:25:56,104 | INFO     | chi2: 3.2841326467104084
[2025-11-26 22:45:32] 2025-11-27 02:25:56,104 | INFO     | current chi2=3.2841326467104084 (change=50.453419373262676 %)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,105 | INFO     | sum of square deviations: 81668791433.84418
[2025-11-26 22:45:32] 2025-11-27 02:25:56,112 | INFO     | sum of deviations: 1493402980315.9385
[2025-11-26 22:45:32] 2025-11-27 02:25:56,113 | INFO     | mean x: 1764190171.9843993
[2025-11-26 22:45:32] 2025-11-27 02:25:56,113 | INFO     | mean y: 3095477.794071763
[2025-11-26 22:45:32] 2025-11-27 02:25:56,113 | INFO     | intersect: -32257047159.675793
[2025-11-26 22:45:32] 2025-11-27 02:25:56,114 | INFO     | chi2: 2.421552438136791
[2025-11-26 22:45:32] 2025-11-27 02:25:56,114 | INFO     | current chi2=2.421552438136791 (change=26.265084311915093 %)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,114 | INFO     | sum of square deviations: 79772587156.87267
[2025-11-26 22:45:32] 2025-11-27 02:25:56,122 | INFO     | sum of deviations: 1475138943876.5378
[2025-11-26 22:45:32] 2025-11-27 02:25:56,122 | INFO     | mean x: 1764190019.4858491
[2025-11-26 22:45:32] 2025-11-27 02:25:56,122 | INFO     | mean y: 3094005.0597484275
[2025-11-26 22:45:32] 2025-11-27 02:25:56,122 | INFO     | intersect: -32619959789.399975
[2025-11-26 22:45:32] 2025-11-27 02:25:56,123 | INFO     | chi2: 2.4019721400298755
[2025-11-26 22:45:32] 2025-11-27 02:25:56,123 | INFO     | current chi2=2.4019721400298755 (change=0.8085845178715662 %)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,123 | INFO     | right removable region: 635
[2025-11-26 22:45:32] 2025-11-27 02:25:56,124 | INFO     | sum of square deviations: 83594308259.10419
[2025-11-26 22:45:32] 2025-11-27 02:25:56,132 | INFO     | sum of deviations: 961952636655.012
[2025-11-26 22:45:32] 2025-11-27 02:25:56,132 | INFO     | mean x: 1764190629.4752321
[2025-11-26 22:45:32] 2025-11-27 02:25:56,132 | INFO     | mean y: 3083623.0944272447
[2025-11-26 22:45:32] 2025-11-27 02:25:56,132 | INFO     | intersect: -20298152943.46258
[2025-11-26 22:45:32] 2025-11-27 02:25:56,133 | INFO     | chi2: 4.421483213649412
[2025-11-26 22:45:32] 2025-11-27 02:25:56,133 | INFO     | current chi2=4.421483213649412 (change=33.29460222799472 %)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,134 | INFO     | sum of square deviations: 81668218892.64903
[2025-11-26 22:45:32] 2025-11-27 02:25:56,141 | INFO     | sum of deviations: 914506867035.2648
[2025-11-26 22:45:32] 2025-11-27 02:25:56,142 | INFO     | mean x: 1764190781.976599
[2025-11-26 22:45:32] 2025-11-27 02:25:56,142 | INFO     | mean y: 3087378.6177847115
[2025-11-26 22:45:32] 2025-11-27 02:25:56,142 | INFO     | intersect: -19752021851.799538
[2025-11-26 22:45:32] 2025-11-27 02:25:56,143 | INFO     | chi2: 4.391327860770348
[2025-11-26 22:45:32] 2025-11-27 02:25:56,143 | INFO     | current chi2=4.391327860770348 (change=0.6820189384859083 %)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,143 | INFO     | left removable region: 20
[2025-11-26 22:45:32] 2025-11-27 02:25:56,144 | INFO     | sum of square deviations: 72128479144.98535
[2025-11-26 22:45:32] 2025-11-27 02:25:56,151 | INFO     | sum of deviations: 1179978024001.1318
[2025-11-26 22:45:32] 2025-11-27 02:25:56,151 | INFO     | mean x: 1764190598.995122
[2025-11-26 22:45:32] 2025-11-27 02:25:56,152 | INFO     | mean y: 3117551.7105691056
[2025-11-26 22:45:32] 2025-11-27 02:25:56,152 | INFO     | intersect: -28857967024.593925
[2025-11-26 22:45:32] 2025-11-27 02:25:56,152 | INFO     | chi2: 0.11638658154052028
[2025-11-26 22:45:32] 2025-11-27 02:25:56,153 | INFO     | current memory leak: 16.36 B/s (using 615 data points, chi2=0.12)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,153 | INFO     | could have reported an average CPU frequency of 2833 MHz (25 samples)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | ..............................
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . Timing measurements:
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . get job = 0 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . initial setup = 2 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . payload setup = 8 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . stage-in = 0 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . payload execution = 39693 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . stage-out = 4 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | . log creation = 0 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,154 | INFO     | ..............................
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | 
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | job summary report
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | --------------------------------------------------
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | PanDA job id: 6896714135
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | task id: 47556161
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | errors: (none)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:45:32] 2025-11-27 02:25:56,726 | INFO     | pilot state: finished 
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | transexitcode: 0
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | exeerrorcode: 0
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | exeerrordiag: 
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | exitcode: 0
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | exitmsg: OK
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | cpuconsumptiontime: 246067 s
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | nevents: 1000
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | neventsw: 0
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | pid: 2705719
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | pgrp: 2705719
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | corecount: 9
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | event service: False
[2025-11-26 22:45:32] 2025-11-27 02:25:56,727 | INFO     | sizes: {0: 2284092, 1: 2284291, 8: 2284553, 11: 2284581, 39705: 2328360, 39706: 2328359, 39710: 2337593, 39721: 2337847}
[2025-11-26 22:45:32] 2025-11-27 02:25:56,728 | INFO     | --------------------------------------------------
[2025-11-26 22:45:32] 2025-11-27 02:25:56,728 | INFO     | 
[2025-11-26 22:45:32] 2025-11-27 02:25:56,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 22:45:32] 2025-11-27 02:25:56,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:45:32] 2025-11-27 02:25:56,750 | INFO     | job 6896714135 has completed (purged errors)
[2025-11-26 22:45:32] 2025-11-27 02:25:56,750 | INFO     | overall cleanup function is called
[2025-11-26 22:45:32] 2025-11-27 02:25:57,766 | INFO     | --- collectZombieJob: --- 10, [2705719]
[2025-11-26 22:45:32] 2025-11-27 02:25:57,766 | INFO     | zombie collector waiting for pid 2705719
[2025-11-26 22:45:32] 2025-11-27 02:25:57,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:45:32] 2025-11-27 02:25:57,766 | INFO     | collected zombie processes
[2025-11-26 22:45:32] 2025-11-27 02:25:57,766 | INFO     | will attempt to kill all subprocesses of pid=2705719
[2025-11-26 22:45:32] 2025-11-27 02:25:58,221 | INFO     | process IDs to be killed: [2705719] (in reverse order)
[2025-11-26 22:45:32] 2025-11-27 02:25:58,344 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:45:32] 2025-11-27 02:25:58,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:45:32] 2025-11-27 02:25:58,361 | INFO     | did not find any defunct processes belonging to 2705719
[2025-11-26 22:45:32] 2025-11-27 02:25:58,377 | INFO     | did not find any defunct processes belonging to 2705719
[2025-11-26 22:45:32] 2025-11-27 02:25:58,379 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:45:32] 2025-11-27 02:25:58,379 | INFO     | ready for new job
[2025-11-26 22:45:32] 2025-11-27 02:25:58,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:45:32] 2025-11-27 02:25:58,383 | INFO     | ***************************************
[2025-11-26 22:45:32] 2025-11-27 02:25:58,383 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:45:32] 2025-11-27 02:25:58,383 | INFO     | ***************************************
[2025-11-26 22:45:32] 2025-11-27 02:25:58,383 | INFO     | 
[2025-11-26 22:45:32] 2025-11-27 02:25:58,387 | INFO     | architecture information:
[2025-11-26 22:45:32] 2025-11-27 02:25:58,387 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:45:32] 2025-11-27 02:25:58,409 | INFO     | cat /etc/os-release:
[2025-11-26 22:45:32] NAME="CentOS Linux"
[2025-11-26 22:45:32] VERSION="7 (Core)"
[2025-11-26 22:45:32] ID="centos"
[2025-11-26 22:45:32] ID_LIKE="rhel fedora"
[2025-11-26 22:45:32] VERSION_ID="7"
[2025-11-26 22:45:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:45:32] ANSI_COLOR="0;31"
[2025-11-26 22:45:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:45:32] HOME_URL="https://www.centos.org/"
[2025-11-26 22:45:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:45:32] 
[2025-11-26 22:45:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:45:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:45:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:45:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:45:32] 
[2025-11-26 22:45:32] 2025-11-27 02:25:58,410 | INFO     | ***************************************
[2025-11-26 22:45:32] 2025-11-27 02:25:58,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 22:45:32] 2025-11-27 02:25:58,938 | INFO     | sufficient remaining disk space (70706528256 B)
[2025-11-26 22:45:32] 2025-11-27 02:25:58,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:45:32] 2025-11-27 02:25:58,939 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:45:32] 2025-11-27 02:25:58,939 | INFO     | update_server=False
[2025-11-26 22:45:32] 2025-11-27 02:25:58,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:45:32] 2025-11-27 02:25:58,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:45:32] 2025-11-27 02:25:59,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:45:32] 2025-11-27 02:25:59,524 | INFO     | aborting loop
[2025-11-26 22:45:32] 2025-11-27 02:25:59,708 | INFO     | all data control threads have been joined
[2025-11-26 22:45:32] 2025-11-27 02:25:59,734 | INFO     | all job control threads have been joined
[2025-11-26 22:45:32] 2025-11-27 02:25:59,944 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,010 | INFO     | all payload control threads have been joined
[2025-11-26 22:45:32] 2025-11-27 02:26:00,187 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,240 | INFO     | [job] validate thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,240 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:45:32] 2025-11-27 02:26:00,530 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,714 | INFO     | [data] control thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,719 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,747 | INFO     | [job] control thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:00,947 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:01,018 | INFO     | [payload] control thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:01,021 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:01,195 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:01,224 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:01,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:45:32] 2025-11-27 02:26:01,351 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:02,261 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:04,530 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:45:32] 2025-11-27 02:26:29,238 | INFO     | PID=2699232 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:45:32] 2025-11-27 02:26:29,238 | INFO     | .. there are 31 such processes running
[2025-11-26 22:45:32] 2025-11-27 02:26:29,239 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:45:32] 2025-11-27 02:26:29,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:45:32] 2025-11-27 02:26:29,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:45:32] 2025-11-27 02:26:44,549 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:45:32] 2025-11-27 02:26:45,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230911989568)>', '<ExcThread(monitor, started 140230279558912)>']
[2025-11-26 22:45:32] 2025-11-27 02:26:45,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:45:32] 2025-11-27 02:26:45,380 | INFO     | [monitor] control thread has ended
[2025-11-26 22:45:32] 2025-11-27 02:26:50,155 | INFO     | all workflow threads have been joined
[2025-11-26 22:45:32] 2025-11-27 02:26:50,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:45:32] 2025-11-27 02:26:50,155 | INFO     | traces error code: 0
[2025-11-26 22:45:32] 2025-11-27 02:26:50,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:45:32] 2025-11-27 02:26:50,474 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:45:32] 2025-11-27 02:26:50,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:45:32] 2025-11-27 02:26:50,482 [wrapper] pilotpid: 2699232
[2025-11-26 22:45:32] 2025-11-27 02:26:50,486 [wrapper] Pilot exit status: 0
[2025-11-26 22:45:32] 2025-11-27 02:26:50,510 [wrapper] pandaids: 6896714135
[2025-11-26 22:45:32] 2025-11-27 02:26:50,605 [wrapper] cleanup supervisor_pilot  867291 2699233
[2025-11-26 22:45:32] 2025-11-27 02:26:50,608 [wrapper] Test setup, not cleaning
[2025-11-26 22:45:32] 2025-11-27 02:26:50,611 [wrapper] apfmon messages muted
[2025-11-26 22:45:32] 2025-11-27 02:26:50,614 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:45:32] 2025-11-27 02:26:50,617 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:45:32]  *** Error codes and diagnostics ***
[2025-11-26 22:45:32]     "exeErrorCode": 0,
[2025-11-26 22:45:32]     "exeErrorDiag": "",
[2025-11-26 22:45:32]     "pilotErrorCode": 0,
[2025-11-26 22:45:32]     "pilotErrorDiag": "",
[2025-11-26 22:45:32]  *** Listing of results directory ***
[2025-11-26 22:45:32] total 1327624
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:36 queuedata.json
[2025-11-26 22:45:32] -rwx------. 1 boincer umatlas     36292 Nov 25 01:37 runpilot2-wrapper.sh
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas       100 Nov 26 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:45:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 10:23 run_atlas
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas       105 Nov 26 10:23 job.xml
[2025-11-26 22:45:32] -rw-r--r--. 2 boincer umatlas 409646500 Nov 26 10:23 EVNT.47483658._002123.pool.root.1
[2025-11-26 22:45:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:23 start_atlas.sh
[2025-11-26 22:45:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 10:23 shared
[2025-11-26 22:45:32] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 10:23 input.tar.gz
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas         0 Nov 26 10:23 boinc_lockfile
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 10:23 pandaJob.out
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas        57 Nov 26 10:23 setup.sh.local
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas    991855 Nov 26 10:23 agis_schedconf.cvmfs.json
[2025-11-26 22:45:32] drwx------. 5 boincer umatlas      4096 Nov 26 10:23 pilot3
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas       533 Nov 26 21:14 boinc_task_state.xml
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas 930984091 Nov 26 21:25 HITS.47556161._001065.pool.root.1
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas      1066 Nov 26 21:25 memory_monitor_summary.json
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:25 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas   2030659 Nov 26 21:25 log.47556161._001065.job.log.tgz.1
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas      8646 Nov 26 21:25 heartbeat.json
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas        95 Nov 26 21:26 pilot_heartbeat.json
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas      4824 Nov 26 21:26 pilotlog.txt
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas   5433568 Nov 26 21:26 log.47556161._001065.job.log.1
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas       353 Nov 26 21:26 output.list
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:26 runtime_log
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas   7485440 Nov 26 21:26 result.tar.gz
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 21:26 runtime_log.err
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas       663 Nov 26 21:26 iMNLDm9q1h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiNJKDmvjMoKn.diag
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 22:45 init_data.xml
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:45 boinc_mmap_file
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:45 wrapper_checkpoint.txt
[2025-11-26 22:45:32] -rw-r--r--. 1 boincer umatlas     21130 Nov 26 22:45 stderr.txt
[2025-11-26 22:45:32] HITS file was successfully produced:
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas 930984091 Nov 26 21:25 shared/HITS.pool.root.1
[2025-11-26 22:45:32]  *** Contents of shared directory: ***
[2025-11-26 22:45:32] total 1317132
[2025-11-26 22:45:32] -rw-r--r--. 2 boincer umatlas 409646500 Nov 26 10:23 ATLAS.root_0
[2025-11-26 22:45:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:23 start_atlas.sh
[2025-11-26 22:45:32] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 10:23 input.tar.gz
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas 930984091 Nov 26 21:25 HITS.pool.root.1
[2025-11-26 22:45:32] -rw-------. 1 boincer umatlas   7485440 Nov 26 21:26 result.tar.gz
22:45:34 (2695563): run_atlas exited; CPU time 246636.422267
22:45:34 (2695563): called boinc_finish(0)

</stderr_txt>
]]>

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