Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:53 (3869313): wrapper (7.7.26015): starting
00:00:53 (3869313): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:53] Arguments: --nthreads 9
[2025-11-26 00:00:53] Threads: 9
[2025-11-26 00:00:53] Checking for CVMFS
[2025-11-26 00:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:55] 2.13.3.0 11830 29468 365772 153309 0 576 28851510 32935936 36442 16776704 0 160658655 99.552 176480046 32977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:00:55] CVMFS is ok
[2025-11-26 00:00:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:55] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:55] Checking for apptainer binary...
[2025-11-26 00:00:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:55] Running /usr/bin/apptainer --version
[2025-11-26 00:00:55] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:56] c6-8-25-1.aglt2.org
[2025-11-26 00:00:56] apptainer works
[2025-11-26 00:00:56] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:56] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:56] Starting ATLAS job with PandaID=6896714623
[2025-11-26 00:00:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:04:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:04:21] 2025-11-27 08:03:06,320 | INFO     | monitor loop #4823: job 0:6896714623 is in state 'finished'
[2025-11-27 03:04:21] 2025-11-27 08:03:06,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:04:21] 2025-11-27 08:03:07,012 | INFO     | time since job start (97259s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:08,836 | INFO     | monitor loop #4824: job 0:6896714623 is in state 'finished'
[2025-11-27 03:04:21] 2025-11-27 08:03:08,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:04:21] 2025-11-27 08:03:09,019 | INFO     | time since job start (97261s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:11,026 | INFO     | time since job start (97263s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:11,341 | INFO     | monitor loop #4825: job 0:6896714623 is in state 'finished'
[2025-11-27 03:04:21] 2025-11-27 08:03:11,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:04:21] 2025-11-27 08:03:13,034 | INFO     | time since job start (97265s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:13,846 | INFO     | monitor loop #4826: job 0:6896714623 is in state 'finished'
[2025-11-27 03:04:21] 2025-11-27 08:03:13,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:04:21] 2025-11-27 08:03:15,041 | INFO     | time since job start (97267s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:16,354 | INFO     | monitor loop #4827: job 0:6896714623 is in state 'finished'
[2025-11-27 03:04:21] 2025-11-27 08:03:16,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:04:21] 2025-11-27 08:03:17,048 | INFO     | time since job start (97269s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:17,932 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 03:04:21] 2025-11-27 08:03:18,058 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2599.950843749999
[2025-11-27 03:04:21] 2025-11-27 08:03:18,258 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6896714623/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:04:21] 2025-11-27 08:03:18,258 | INFO     | extracted standard info from prmon json
[2025-11-27 03:04:21] 2025-11-27 08:03:18,259 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:04:21] 2025-11-27 08:03:18,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:04:21] 2025-11-27 08:03:18,319 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:04:21] 2025-11-27 08:03:18,322 | INFO     | sum of square deviations: 1251116209851.7188
[2025-11-27 03:04:21] 2025-11-27 08:03:18,429 | INFO     | sum of deviations: 4188700600497.7705
[2025-11-27 03:04:21] 2025-11-27 08:03:18,429 | INFO     | mean x: 1764182017.562814
[2025-11-27 03:04:21] 2025-11-27 08:03:18,429 | INFO     | mean y: 3013307.837311558
[2025-11-27 03:04:21] 2025-11-27 08:03:18,430 | INFO     | intersect: -5903416660.989117
[2025-11-27 03:04:21] 2025-11-27 08:03:18,435 | INFO     | chi2: 30.16826894315383
[2025-11-27 03:04:21] 2025-11-27 08:03:18,442 | INFO     | sum of square deviations: 1239366743568.9268
[2025-11-27 03:04:21] 2025-11-27 08:03:18,551 | INFO     | sum of deviations: 4786128311880.111
[2025-11-27 03:04:21] 2025-11-27 08:03:18,551 | INFO     | mean x: 1764181865.0756145
[2025-11-27 03:04:21] 2025-11-27 08:03:18,551 | INFO     | mean y: 3021059.9073724006
[2025-11-27 03:04:21] 2025-11-27 08:03:18,551 | INFO     | intersect: -6809813652.3016615
[2025-11-27 03:04:21] 2025-11-27 08:03:18,556 | INFO     | chi2: 26.324715315773098
[2025-11-27 03:04:21] 2025-11-27 08:03:18,556 | INFO     | current chi2=26.324715315773098 (change=12.740385053657382 %)
[2025-11-27 03:04:21] 2025-11-27 08:03:18,556 | INFO     | right removable region: 1586
[2025-11-27 03:04:21] 2025-11-27 08:03:18,563 | INFO     | sum of square deviations: 1239362798088.927
[2025-11-27 03:04:21] 2025-11-27 08:03:18,674 | INFO     | sum of deviations: 3543466194807.1636
[2025-11-27 03:04:21] 2025-11-27 08:03:18,674 | INFO     | mean x: 1764182170.0756145
[2025-11-27 03:04:21] 2025-11-27 08:03:18,674 | INFO     | mean y: 3021678.856962823
[2025-11-27 03:04:21] 2025-11-27 08:03:18,675 | INFO     | intersect: -5040957284.190737
[2025-11-27 03:04:21] 2025-11-27 08:03:18,681 | INFO     | chi2: 26.407313024513616
[2025-11-27 03:04:21] 2025-11-27 08:03:18,681 | INFO     | current chi2=26.407313024513616 (change=12.466595036417221 %)
[2025-11-27 03:04:21] 2025-11-27 08:03:18,681 | INFO     | left removable region: 10
[2025-11-27 03:04:21] 2025-11-27 08:03:18,683 | INFO     | sum of square deviations: 1213769625773.143
[2025-11-27 03:04:21] 2025-11-27 08:03:18,919 | INFO     | sum of deviations: 3711905224425.3086
[2025-11-27 03:04:21] 2025-11-27 08:03:18,920 | INFO     | mean x: 1764182139.6034265
[2025-11-27 03:04:21] 2025-11-27 08:03:18,920 | INFO     | mean y: 3037914.571700508
[2025-11-27 03:04:21] 2025-11-27 08:03:18,920 | INFO     | intersect: -5392118432.87813
[2025-11-27 03:04:21] 2025-11-27 08:03:18,922 | INFO     | chi2: 19.387954662372426
[2025-11-27 03:04:21] 2025-11-27 08:03:18,944 | INFO     | current memory leak: 3.06 B/s (using 1576 data points, chi2=19.39)
[2025-11-27 03:04:21] 2025-11-27 08:03:18,946 | INFO     | could have reported an average CPU frequency of 2630 MHz (56 samples)
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | ..............................
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . Timing measurements:
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . get job = 0 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . initial setup = 7 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . payload setup = 45 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . stage-in = 0 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . payload execution = 97096 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . stage-out = 11 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,947 | INFO     | . log creation = 3 s
[2025-11-27 03:04:21] 2025-11-27 08:03:18,948 | INFO     | ..............................
[2025-11-27 03:04:21] 2025-11-27 08:03:19,062 | INFO     | time since job start (97271s) is within the limit (172800.0s)
[2025-11-27 03:04:21] 2025-11-27 08:03:19,338 | INFO     | 
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | job summary report
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | --------------------------------------------------
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | PanDA job id: 6896714623
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | task id: 47556161
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | errors: (none)
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | pilot state: finished 
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | transexitcode: 0
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | exeerrorcode: 0
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | exeerrordiag: 
[2025-11-27 03:04:21] 2025-11-27 08:03:19,339 | INFO     | exitcode: 0
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | exitmsg: OK
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | cpuconsumptiontime: 280923 s
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | nevents: 1000
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | neventsw: 0
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | pid: 3928677
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | pgrp: 3928677
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | corecount: 9
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | event service: False
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | sizes: {0: 2284037, 1: 2284121, 2: 2284320, 13: 2284320, 24: 2284376, 35: 2284404, 37: 2284822, 46: 2284850, 97142: 2353153, 97154: 2362203, 97190: 2362393}
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | --------------------------------------------------
[2025-11-27 03:04:21] 2025-11-27 08:03:19,340 | INFO     | 
[2025-11-27 03:04:21] 2025-11-27 08:03:19,341 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 03:04:21] 2025-11-27 08:03:19,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:04:21] 2025-11-27 08:03:19,427 | INFO     | job 6896714623 has completed (purged errors)
[2025-11-27 03:04:21] 2025-11-27 08:03:19,428 | INFO     | overall cleanup function is called
[2025-11-27 03:04:21] 2025-11-27 08:03:20,498 | INFO     | --- collectZombieJob: --- 10, [3928677]
[2025-11-27 03:04:21] 2025-11-27 08:03:20,499 | INFO     | zombie collector waiting for pid 3928677
[2025-11-27 03:04:21] 2025-11-27 08:03:20,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:04:21] 2025-11-27 08:03:20,499 | INFO     | collected zombie processes
[2025-11-27 03:04:21] 2025-11-27 08:03:20,499 | INFO     | will attempt to kill all subprocesses of pid=3928677
[2025-11-27 03:04:21] 2025-11-27 08:03:21,546 | INFO     | process IDs to be killed: [3928677] (in reverse order)
[2025-11-27 03:04:21] 2025-11-27 08:03:21,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:04:21] 2025-11-27 08:03:21,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:04:21] 2025-11-27 08:03:21,887 | INFO     | did not find any defunct processes belonging to 3928677
[2025-11-27 03:04:21] 2025-11-27 08:03:21,936 | INFO     | did not find any defunct processes belonging to 3928677
[2025-11-27 03:04:21] 2025-11-27 08:03:21,945 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:04:21] 2025-11-27 08:03:21,945 | INFO     | ready for new job
[2025-11-27 03:04:21] 2025-11-27 08:03:21,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:04:21] 2025-11-27 08:03:21,955 | INFO     | ***************************************
[2025-11-27 03:04:21] 2025-11-27 08:03:21,955 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:04:21] 2025-11-27 08:03:21,955 | INFO     | ***************************************
[2025-11-27 03:04:21] 2025-11-27 08:03:21,955 | INFO     | 
[2025-11-27 03:04:21] 2025-11-27 08:03:21,968 | INFO     | architecture information:
[2025-11-27 03:04:21] 2025-11-27 08:03:21,975 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:04:21] 2025-11-27 08:03:22,046 | INFO     | cat /etc/os-release:
[2025-11-27 03:04:21] NAME="CentOS Linux"
[2025-11-27 03:04:21] VERSION="7 (Core)"
[2025-11-27 03:04:21] ID="centos"
[2025-11-27 03:04:21] ID_LIKE="rhel fedora"
[2025-11-27 03:04:21] VERSION_ID="7"
[2025-11-27 03:04:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:04:21] ANSI_COLOR="0;31"
[2025-11-27 03:04:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:04:21] HOME_URL="https://www.centos.org/"
[2025-11-27 03:04:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:04:21] 
[2025-11-27 03:04:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:04:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:04:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:04:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:04:21] 
[2025-11-27 03:04:21] 2025-11-27 08:03:22,046 | INFO     | ***************************************
[2025-11-27 03:04:21] 2025-11-27 08:03:22,552 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 03:04:21] 2025-11-27 08:03:22,646 | INFO     | sufficient remaining disk space (65782415360 B)
[2025-11-27 03:04:21] 2025-11-27 08:03:22,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:04:21] 2025-11-27 08:03:22,646 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:04:21] 2025-11-27 08:03:22,647 | INFO     | update_server=False
[2025-11-27 03:04:21] 2025-11-27 08:03:22,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:04:21] 2025-11-27 08:03:22,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:04:21] 2025-11-27 08:03:22,647 | INFO     | aborting loop
[2025-11-27 03:04:21] 2025-11-27 08:03:23,100 | INFO     | all data control threads have been joined
[2025-11-27 03:04:21] 2025-11-27 08:03:23,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:04:21] 2025-11-27 08:03:23,459 | INFO     | all payload control threads have been joined
[2025-11-27 03:04:21] 2025-11-27 08:03:23,652 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:23,653 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:23,916 | INFO     | all job control threads have been joined
[2025-11-27 03:04:21] 2025-11-27 08:03:23,942 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:23,993 | INFO     | [job] validate thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,106 | INFO     | [data] control thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:04:21] 2025-11-27 08:03:24,338 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,403 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,426 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,427 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,465 | INFO     | [payload] control thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,922 | INFO     | [job] control thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:24,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:04:21] 2025-11-27 08:03:25,022 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:25,153 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:25,297 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:25,385 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:28,942 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:04:21] 2025-11-27 08:03:57,715 | INFO     | PID=3887687 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:04:21] 2025-11-27 08:03:57,715 | INFO     | .. there are 53 such processes running
[2025-11-27 03:04:21] 2025-11-27 08:03:57,716 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:04:21] 2025-11-27 08:03:57,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:04:21] 2025-11-27 08:03:57,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:04:21] 2025-11-27 08:04:12,803 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:04:21] 2025-11-27 08:04:12,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148396189504)>', '<ExcThread(monitor, started 140147391719168)>']
[2025-11-27 03:04:21] 2025-11-27 08:04:13,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:04:21] 2025-11-27 08:04:13,814 | INFO     | [monitor] control thread has ended
[2025-11-27 03:04:21] 2025-11-27 08:04:17,849 | INFO     | all workflow threads have been joined
[2025-11-27 03:04:21] 2025-11-27 08:04:17,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:04:21] 2025-11-27 08:04:17,850 | INFO     | traces error code: 0
[2025-11-27 03:04:21] 2025-11-27 08:04:17,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:04:21] 2025-11-27 08:04:19,941 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:04:21] 2025-11-27 08:04:19,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:04:21] 2025-11-27 08:04:20,002 [wrapper] pilotpid: 3887687
[2025-11-27 03:04:21] 2025-11-27 08:04:20,023 [wrapper] Pilot exit status: 0
[2025-11-27 03:04:21] 2025-11-27 08:04:20,129 [wrapper] pandaids: 6896714623
[2025-11-27 03:04:21] 2025-11-27 08:04:21,056 [wrapper] cleanup supervisor_pilot  279981 3887688
[2025-11-27 03:04:21] 2025-11-27 08:04:21,072 [wrapper] Test setup, not cleaning
[2025-11-27 03:04:21] 2025-11-27 08:04:21,094 [wrapper] apfmon messages muted
[2025-11-27 03:04:21] 2025-11-27 08:04:21,121 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:04:21] 2025-11-27 08:04:21,183 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:04:21]  *** Error codes and diagnostics ***
[2025-11-27 03:04:21]     "exeErrorCode": 0,
[2025-11-27 03:04:21]     "exeErrorDiag": "",
[2025-11-27 03:04:21]     "pilotErrorCode": 0,
[2025-11-27 03:04:21]     "pilotErrorDiag": "",
[2025-11-27 03:04:21]  *** Listing of results directory ***
[2025-11-27 03:04:22] total 1346112
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:41 queuedata.json
[2025-11-27 03:04:22] -rwx------. 1 boincer umatlas     36292 Nov 25 01:43 runpilot2-wrapper.sh
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:04:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-27 03:04:22] -rw-r--r--. 2 boincer umatlas 411664993 Nov 26 00:00 EVNT.47483658._002125.pool.root.1
[2025-11-27 03:04:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 03:04:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-27 03:04:22] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:00 input.tar.gz
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:00 pandaJob.out
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas    991877 Nov 26 00:02 agis_schedconf.cvmfs.json
[2025-11-27 03:04:22] drwx------. 5 boincer umatlas      4096 Nov 26 00:02 pilot3
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:09 boinc_task_state.xml
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas      6877 Nov 27 02:55 init_data.xml
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas 935548711 Nov 27 03:01 HITS.47556161._001086.pool.root.1
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas      1059 Nov 27 03:02 memory_monitor_summary.json
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas   2626271 Nov 27 03:02 log.47556161._001086.job.log.tgz.1
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas      8620 Nov 27 03:03 heartbeat.json
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas        95 Nov 27 03:03 pilot_heartbeat.json
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:04 boinc_mmap_file
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:04 wrapper_checkpoint.txt
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas      4824 Nov 27 03:04 pilotlog.txt
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas  11011165 Nov 27 03:04 log.47556161._001086.job.log.1
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas       353 Nov 27 03:04 output.list
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:04 runtime_log
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas  13660160 Nov 27 03:04 result.tar.gz
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 03:04 runtime_log.err
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas       662 Nov 27 03:04 q6OLDm6w1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUDMKDmADaHsn.diag
[2025-11-27 03:04:22] -rw-r--r--. 1 boincer umatlas     21816 Nov 27 03:04 stderr.txt
[2025-11-27 03:04:22] HITS file was successfully produced:
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas 935548711 Nov 27 03:01 shared/HITS.pool.root.1
[2025-11-27 03:04:22]  *** Contents of shared directory: ***
[2025-11-27 03:04:22] total 1329588
[2025-11-27 03:04:22] -rw-r--r--. 2 boincer umatlas 411664993 Nov 26 00:00 ATLAS.root_0
[2025-11-27 03:04:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 03:04:22] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 00:00 input.tar.gz
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas 935548711 Nov 27 03:01 HITS.pool.root.1
[2025-11-27 03:04:22] -rw-------. 1 boincer umatlas  13660160 Nov 27 03:04 result.tar.gz
03:04:23 (3869313): run_atlas exited; CPU time 285170.401339
03:04:23 (3869313): called boinc_finish(0)

</stderr_txt>
]]>

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